***  OXYGEN TRANSPORT 07-MAR-84 4HHB  ***
Output from eigenvector calculation:
STDOUT:
CUTOFF set to default value (CUTOFF=8)
Build Tirion matrix:
Pdbmat> Computes the Hessian matrix, using an Elastic Network Model.
Pdbmat> Version 3.50, Fevrier 2004.
Pdbmat> Options to be read in pdbmat.dat file.
Pdbmat> Coordinate filename = 2609110740143436876.atom
Pdbmat> Distance cutoff = 8.00
Force constant = 10.00
Origin of mass values = CONS
Pdbmat> Levelshift = 1.0E-09
PRINTing level = 2
Pdbmat> Coordinate file 2609110740143436876.atom to be opened.
Openam> File opened: 2609110740143436876.atom
Pdbmat> Coordinate file in PDB format.
Rdatompdb> Reading pdb file.
Rdatompdb> End of file reached.
Rdatompdb> Number of I/O errors: 0
Rdatompdb> Number of residues found = 574
First residue number = 1
Last residue number = 146
Number of atoms found = 4384
Mean number per residue = 7.6
Pdbmat> Coordinate statistics:
= 10.213605 +/- 15.956076 From: -24.242000 To: 42.747000
= 13.266237 +/- 11.917268 From: -15.297000 To: 41.915000
= 39.883972 +/- 12.621645 From: 11.202000 To: 68.475000
Pdbmat> Masses are all set to one.
Openam> File opened: pdbmat.xyzm
Pdbmat> Coordinates and masses considered are saved.
Openam> File opened: pdbmat.sdijb
Pdbmat> Matrix statistics:
Pdbmat> The matrix is 1.8705 % Filled.
Pdbmat> 1617857 non-zero elements.
Pdbmat> 176867 atom-atom interactions.
Pdbmat> Number per atom= 80.69 +/- 20.17
Maximum number = 129
Minimum number = 12
Pdbmat> Matrix trace = 3.537340E+06
Pdbmat> Larger element = 485.349
Pdbmat> 0 elements larger than +/- 1.0E+10
Pdbmat> Normal end.
automatic determination of NRBL (NRBL = nresidues/200 + 1)
574 non-zero elements, NRBL set to 3
Diagonalize Tirion matrix using diagrtb
Diagrtb> Diagonalizes a matrix, using the RTB/BNM approximation.
Diagrtb> Version 2.52, November 2004.
Diagrtb> Options to be read in diagrtb.dat file.
Diagrtb> Options taken into account:
MATRix filename = pdbmat.sdijb
COORdinates filename = 2609110740143436876.atom
Eigenvector OUTPut file = matrix.eigenrtb
Nb of VECTors required = 106
EigeNVALues chosen = LOWE
Type of SUBStructuring = NONE
Nb of residues per BLOck = 3
Origin of MASS values = CONS
MATRix FORMat = BINA
Temporary files cleaning = ALL
Output PRINting level = 2
Diagrtb> Memory allocation for Blocpdb.
Blocpdb> Entering in.
Openam> file on opening on unit 10:
diagrtb_work.xyzm
Blocpdb> Coordinate file 2609110740143436876.atom to be opened.
Openam> file on opening on unit 11:
2609110740143436876.atom
Blocpdb> Coordinate file in PDB format.
Blocpdb> 4384 atoms picked in pdb file.
Blocpdb> All masses set to unity.
Blocpdb> Coordinate file is rewritten.
Blocpdb> Substructuring:
Blocpdb> 3 residue(s) per block.
Blocpdb> 574 residues.
Blocpdb> 21 atoms in block 1
Block first atom: 1
Blocpdb> 20 atoms in block 2
Block first atom: 22
Blocpdb> 24 atoms in block 3
Block first atom: 42
Blocpdb> 21 atoms in block 4
Block first atom: 66
Blocpdb> 23 atoms in block 5
Block first atom: 87
Blocpdb> 20 atoms in block 6
Block first atom: 110
Blocpdb> 20 atoms in block 7
Block first atom: 130
Blocpdb> 25 atoms in block 8
Block first atom: 150
Blocpdb> 18 atoms in block 9
Block first atom: 175
Blocpdb> 22 atoms in block 10
Block first atom: 193
Blocpdb> 30 atoms in block 11
Block first atom: 215
Blocpdb> 25 atoms in block 12
Block first atom: 245
Blocpdb> 21 atoms in block 13
Block first atom: 270
Blocpdb> 28 atoms in block 14
Block first atom: 291
Blocpdb> 28 atoms in block 15
Block first atom: 319
Blocpdb> 27 atoms in block 16
Block first atom: 347
Blocpdb> 20 atoms in block 17
Block first atom: 374
Blocpdb> 20 atoms in block 18
Block first atom: 394
Blocpdb> 20 atoms in block 19
Block first atom: 414
Blocpdb> 23 atoms in block 20
Block first atom: 434
Blocpdb> 21 atoms in block 21
Block first atom: 457
Blocpdb> 21 atoms in block 22
Block first atom: 478
Blocpdb> 20 atoms in block 23
Block first atom: 499
Blocpdb> 22 atoms in block 24
Block first atom: 519
Blocpdb> 23 atoms in block 25
Block first atom: 541
Blocpdb> 23 atoms in block 26
Block first atom: 564
Blocpdb> 19 atoms in block 27
Block first atom: 587
Blocpdb> 19 atoms in block 28
Block first atom: 606
Blocpdb> 26 atoms in block 29
Block first atom: 625
Blocpdb> 24 atoms in block 30
Block first atom: 651
Blocpdb> 26 atoms in block 31
Block first atom: 675
Blocpdb> 22 atoms in block 32
Block first atom: 701
Blocpdb> 28 atoms in block 33
Block first atom: 723
Blocpdb> 22 atoms in block 34
Block first atom: 751
Blocpdb> 24 atoms in block 35
Block first atom: 773
Blocpdb> 22 atoms in block 36
Block first atom: 797
Blocpdb> 18 atoms in block 37
Block first atom: 819
Blocpdb> 25 atoms in block 38
Block first atom: 837
Blocpdb> 25 atoms in block 39
Block first atom: 862
Blocpdb> 19 atoms in block 40
Block first atom: 887
Blocpdb> 22 atoms in block 41
Block first atom: 906
Blocpdb> 22 atoms in block 42
Block first atom: 928
Blocpdb> 28 atoms in block 43
Block first atom: 950
Blocpdb> 18 atoms in block 44
Block first atom: 978
Blocpdb> 20 atoms in block 45
Block first atom: 996
Blocpdb> 21 atoms in block 46
Block first atom: 1016
Blocpdb> 33 atoms in block 47
Block first atom: 1037
Blocpdb> 25 atoms in block 48
Block first atom: 1070
Blocpdb> 23 atoms in block 49
Block first atom: 1095
Blocpdb> 24 atoms in block 50
Block first atom: 1118
Blocpdb> 19 atoms in block 51
Block first atom: 1142
Blocpdb> 27 atoms in block 52
Block first atom: 1161
Blocpdb> 20 atoms in block 53
Block first atom: 1188
Blocpdb> 23 atoms in block 54
Block first atom: 1208
Blocpdb> 20 atoms in block 55
Block first atom: 1231
Blocpdb> 18 atoms in block 56
Block first atom: 1251
Blocpdb> 23 atoms in block 57
Block first atom: 1269
Blocpdb> 23 atoms in block 58
Block first atom: 1292
Blocpdb> 26 atoms in block 59
Block first atom: 1315
Blocpdb> 30 atoms in block 60
Block first atom: 1341
Blocpdb> 33 atoms in block 61
Block first atom: 1371
Blocpdb> 26 atoms in block 62
Block first atom: 1404
Blocpdb> 20 atoms in block 63
Block first atom: 1430
Blocpdb> 20 atoms in block 64
Block first atom: 1450
Blocpdb> 20 atoms in block 65
Block first atom: 1470
Blocpdb> 20 atoms in block 66
Block first atom: 1490
Blocpdb> 23 atoms in block 67
Block first atom: 1510
Blocpdb> 24 atoms in block 68
Block first atom: 1533
Blocpdb> 22 atoms in block 69
Block first atom: 1557
Blocpdb> 19 atoms in block 70
Block first atom: 1579
Blocpdb> 22 atoms in block 71
Block first atom: 1598
Blocpdb> 20 atoms in block 72
Block first atom: 1620
Blocpdb> 23 atoms in block 73
Block first atom: 1640
Blocpdb> 24 atoms in block 74
Block first atom: 1663
Blocpdb> 20 atoms in block 75
Block first atom: 1687
Blocpdb> 23 atoms in block 76
Block first atom: 1707
Blocpdb> 23 atoms in block 77
Block first atom: 1730
Blocpdb> 24 atoms in block 78
Block first atom: 1753
Blocpdb> 25 atoms in block 79
Block first atom: 1777
Blocpdb> 25 atoms in block 80
Block first atom: 1802
Blocpdb> 24 atoms in block 81
Block first atom: 1827
Blocpdb> 30 atoms in block 82
Block first atom: 1851
Blocpdb> 20 atoms in block 83
Block first atom: 1881
Blocpdb> 22 atoms in block 84
Block first atom: 1901
Blocpdb> 21 atoms in block 85
Block first atom: 1923
Blocpdb> 25 atoms in block 86
Block first atom: 1944
Blocpdb> 24 atoms in block 87
Block first atom: 1969
Blocpdb> 27 atoms in block 88
Block first atom: 1993
Blocpdb> 21 atoms in block 89
Block first atom: 2020
Blocpdb> 19 atoms in block 90
Block first atom: 2041
Blocpdb> 30 atoms in block 91
Block first atom: 2060
Blocpdb> 19 atoms in block 92
Block first atom: 2090
Blocpdb> 16 atoms in block 93
Block first atom: 2109
Blocpdb> 21 atoms in block 94
Block first atom: 2125
Blocpdb> 24 atoms in block 95
Block first atom: 2146
Blocpdb> 23 atoms in block 96
Block first atom: 2170
Blocpdb> 21 atoms in block 97
Block first atom: 2193
Blocpdb> 20 atoms in block 98
Block first atom: 2214
Blocpdb> 24 atoms in block 99
Block first atom: 2234
Blocpdb> 21 atoms in block 100
Block first atom: 2258
Blocpdb> 23 atoms in block 101
Block first atom: 2279
Blocpdb> 20 atoms in block 102
Block first atom: 2302
Blocpdb> 20 atoms in block 103
Block first atom: 2322
Blocpdb> 25 atoms in block 104
Block first atom: 2342
Blocpdb> 18 atoms in block 105
Block first atom: 2367
Blocpdb> 22 atoms in block 106
Block first atom: 2385
Blocpdb> 30 atoms in block 107
Block first atom: 2407
Blocpdb> 25 atoms in block 108
Block first atom: 2437
Blocpdb> 21 atoms in block 109
Block first atom: 2462
Blocpdb> 28 atoms in block 110
Block first atom: 2483
Blocpdb> 28 atoms in block 111
Block first atom: 2511
Blocpdb> 27 atoms in block 112
Block first atom: 2539
Blocpdb> 20 atoms in block 113
Block first atom: 2566
Blocpdb> 20 atoms in block 114
Block first atom: 2586
Blocpdb> 20 atoms in block 115
Block first atom: 2606
Blocpdb> 23 atoms in block 116
Block first atom: 2626
Blocpdb> 21 atoms in block 117
Block first atom: 2649
Blocpdb> 21 atoms in block 118
Block first atom: 2670
Blocpdb> 20 atoms in block 119
Block first atom: 2691
Blocpdb> 22 atoms in block 120
Block first atom: 2711
Blocpdb> 23 atoms in block 121
Block first atom: 2733
Blocpdb> 23 atoms in block 122
Block first atom: 2756
Blocpdb> 19 atoms in block 123
Block first atom: 2779
Blocpdb> 19 atoms in block 124
Block first atom: 2798
Blocpdb> 26 atoms in block 125
Block first atom: 2817
Blocpdb> 24 atoms in block 126
Block first atom: 2843
Blocpdb> 26 atoms in block 127
Block first atom: 2867
Blocpdb> 22 atoms in block 128
Block first atom: 2893
Blocpdb> 28 atoms in block 129
Block first atom: 2915
Blocpdb> 22 atoms in block 130
Block first atom: 2943
Blocpdb> 24 atoms in block 131
Block first atom: 2965
Blocpdb> 22 atoms in block 132
Block first atom: 2989
Blocpdb> 18 atoms in block 133
Block first atom: 3011
Blocpdb> 25 atoms in block 134
Block first atom: 3029
Blocpdb> 25 atoms in block 135
Block first atom: 3054
Blocpdb> 19 atoms in block 136
Block first atom: 3079
Blocpdb> 22 atoms in block 137
Block first atom: 3098
Blocpdb> 22 atoms in block 138
Block first atom: 3120
Blocpdb> 28 atoms in block 139
Block first atom: 3142
Blocpdb> 18 atoms in block 140
Block first atom: 3170
Blocpdb> 20 atoms in block 141
Block first atom: 3188
Blocpdb> 21 atoms in block 142
Block first atom: 3208
Blocpdb> 33 atoms in block 143
Block first atom: 3229
Blocpdb> 25 atoms in block 144
Block first atom: 3262
Blocpdb> 23 atoms in block 145
Block first atom: 3287
Blocpdb> 24 atoms in block 146
Block first atom: 3310
Blocpdb> 19 atoms in block 147
Block first atom: 3334
Blocpdb> 27 atoms in block 148
Block first atom: 3353
Blocpdb> 20 atoms in block 149
Block first atom: 3380
Blocpdb> 23 atoms in block 150
Block first atom: 3400
Blocpdb> 20 atoms in block 151
Block first atom: 3423
Blocpdb> 18 atoms in block 152
Block first atom: 3443
Blocpdb> 23 atoms in block 153
Block first atom: 3461
Blocpdb> 23 atoms in block 154
Block first atom: 3484
Blocpdb> 26 atoms in block 155
Block first atom: 3507
Blocpdb> 30 atoms in block 156
Block first atom: 3533
Blocpdb> 33 atoms in block 157
Block first atom: 3563
Blocpdb> 26 atoms in block 158
Block first atom: 3596
Blocpdb> 20 atoms in block 159
Block first atom: 3622
Blocpdb> 20 atoms in block 160
Block first atom: 3642
Blocpdb> 20 atoms in block 161
Block first atom: 3662
Blocpdb> 20 atoms in block 162
Block first atom: 3682
Blocpdb> 23 atoms in block 163
Block first atom: 3702
Blocpdb> 24 atoms in block 164
Block first atom: 3725
Blocpdb> 22 atoms in block 165
Block first atom: 3749
Blocpdb> 19 atoms in block 166
Block first atom: 3771
Blocpdb> 22 atoms in block 167
Block first atom: 3790
Blocpdb> 20 atoms in block 168
Block first atom: 3812
Blocpdb> 23 atoms in block 169
Block first atom: 3832
Blocpdb> 24 atoms in block 170
Block first atom: 3855
Blocpdb> 20 atoms in block 171
Block first atom: 3879
Blocpdb> 23 atoms in block 172
Block first atom: 3899
Blocpdb> 23 atoms in block 173
Block first atom: 3922
Blocpdb> 24 atoms in block 174
Block first atom: 3945
Blocpdb> 25 atoms in block 175
Block first atom: 3969
Blocpdb> 25 atoms in block 176
Block first atom: 3994
Blocpdb> 24 atoms in block 177
Block first atom: 4019
Blocpdb> 30 atoms in block 178
Block first atom: 4043
Blocpdb> 20 atoms in block 179
Block first atom: 4073
Blocpdb> 22 atoms in block 180
Block first atom: 4093
Blocpdb> 21 atoms in block 181
Block first atom: 4115
Blocpdb> 25 atoms in block 182
Block first atom: 4136
Blocpdb> 24 atoms in block 183
Block first atom: 4161
Blocpdb> 27 atoms in block 184
Block first atom: 4185
Blocpdb> 21 atoms in block 185
Block first atom: 4212
Blocpdb> 19 atoms in block 186
Block first atom: 4233
Blocpdb> 30 atoms in block 187
Block first atom: 4252
Blocpdb> 19 atoms in block 188
Block first atom: 4282
Blocpdb> 16 atoms in block 189
Block first atom: 4301
Blocpdb> 21 atoms in block 190
Block first atom: 4317
Blocpdb> 24 atoms in block 191
Block first atom: 4338
Blocpdb> 23 atoms in block 192
Block first atom: 4361
Blocpdb> 192 blocks.
Blocpdb> At most, 33 atoms in each of them.
Blocpdb> At least, 16 atoms in each of them.
Blocpdb> Normal end of Blocpdb.
Diagrtb> Memory allocation for Prepmat.
Diagrtb> Memory allocation for RTB.
Diagrtb> Memory allocation for Diagstd.
Diagrtb> Memory allocation for RTB_to_modes.
Prepmat> Entering in.
Prepmat> Rewriting of the matrix begins.
Prepmat> 1618049 matrix lines read.
Prepmat> Matrix order = 13152
Prepmat> Matrix trace = 3537340.0000
Prepmat> Last element read: 13152 13152 97.7724
Prepmat> 18529 lines saved.
Prepmat> 16606 empty lines.
Prepmat> Number of lines on output is as expected.
Prepmat> Normal end of Prepmat.
RTB> Entering in.
RTB> Number of atoms found in temporary coordinate file: 4384
RTB> Total mass = 4384.0000
RTB> Number of atoms found in matrix: 4384
RTB> Number of blocks = 192
RTB> Projection begins.
RTB> Projected matrix is being saved.
RTB> Projected matrix trace = 242526.7674
RTB> 66312 non-zero elements.
RTB> Normal end of RTB.
Diagstd> Entering in.
Openam> file on opening on unit 10:
diagrtb_work.sdijb
Diagstd> Projected matrix to be read from file: diagrtb_work.sdijb
Diagstd> CERFACS matrix format.
Diagstd> Projected matrix order = 1152
Diagstd> Nb of non-zero elements: 66312
Diagstd> Projected matrix trace = 242526.7674
Openam> file on opening on unit 11:
diagrtb_work.eigenfacs
Diagstd> Diagonalization.
Diagstd> 1152 eigenvectors are computed.
Diagstd> 106 of them to be saved.
Diagstd> Sum of eigenvalues = 242526.7674
Diagstd> Best zero-eigenvalue found : 0.000000
Diagstd> 6 zero-eigenvalues, that is, below or equal to: 0.0000000
Diagstd> Selected eigenvalues:
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 1.4299097 1.7559020 3.3727321 3.5859947
3.8814496 4.6801918 6.3948871 6.6258137 6.8874700
7.3325036 7.9012903 8.6513319 9.5069666 9.8452841
10.2522189 10.3477205 10.4863350 11.3284149 12.1325322
12.2971912 12.5224095 13.7205581 14.1708352 14.4081253
14.9020132 15.3999560 15.9182433 16.4949825 16.7725143
17.1256429 18.0105307 18.2440695 19.5183100 19.8404217
20.3226951 21.2175388 21.6779061 21.8403260 23.5191035
24.0071794 24.4174609 24.6996524 24.9542492 25.2273245
25.8825890 26.0464722 26.8771846 27.2757226 27.5479121
27.8320988 28.3122917 29.2106159 29.3527528 29.9421558
30.4001990 31.2651455 31.7827176 32.6693265 32.9884207
33.3416447 33.9259263 33.9677467 36.1848239 36.4773146
36.5538152 37.7704757 37.9400168 38.3795109 39.1369220
39.3478303 40.1709899 40.9138107 41.3054773 41.9272815
42.2212422 42.8431361 42.8735580 43.3695223 44.0519216
44.6150043 44.8462454 45.4235943 45.9378751 46.1743448
46.7011916 47.2753981 47.9207726 48.0978721 48.1783035
49.1905876 49.7513487 49.9063913 50.7533381 50.8747117
50.9479603 51.2665696 51.6018741 52.3693162 52.4530626
53.0199658
Diagstd> Frequencies (cm-1, if the input matrix is a hessian in CHARMM units):
0.0034328 0.0034338 0.0034338 0.0034344 0.0034346
0.0034359 129.8522801 143.8949046 199.4280314 205.6364511
213.9401315 234.9238473 274.6070732 279.5212895 284.9870599
294.0501612 305.2419990 319.4013641 334.8237563 340.7292416
347.6996194 349.3153144 351.6471844 365.4936645 378.2430932
380.8011429 384.2724343 402.2362143 408.7831666 412.1914882
419.1966012 426.1426672 433.2542673 441.0331252 444.7278895
449.3851552 460.8488784 463.8271208 479.7515496 483.6940329
489.5374614 500.1989581 505.5963680 507.4869025 526.6300810
532.0664189 536.5936517 539.6854397 542.4597682 545.4197712
552.4578363 554.2041009 562.9724819 567.1310339 569.9537616
572.8860658 577.8069916 586.9020648 588.3282452 594.2056992
598.7334112 607.1912540 612.1964326 620.6765981 623.7004284
627.0306785 632.5008844 632.8906056 653.2185541 655.8533023
656.5406734 667.3774181 668.8735763 672.7365105 679.3422321
681.1702548 688.2584422 694.5927497 697.9094886 703.1429590
705.6035928 710.7811582 711.0334680 715.1342854 720.7384795
725.3301829 727.2074591 731.8735100 736.0049438 737.8968412
742.0945826 746.6427935 751.7218705 753.1096488 753.7390776
761.6163970 765.9452186 767.1377670 773.6198166 774.5442975
775.1016852 777.5215048 780.0600164 785.8392781 786.4673642
790.7059411
Diagstd> Normal end.
Rtb_to_modes> Entering in.
Rtb_to_modes> Number of atoms in temporary block-file = 4384
Rtb_to_modes> Number of blocs = 192
Openam> file on opening on unit 10:
diagrtb_work.eigenfacs
Openam> file on opening on unit 11:
matrix.eigenrtb
Rdmodfacs> Entering in.
Rdmodfacs> Old Blzpack file format detected.
Rdmodfacs> Eigenvector number: 1
Rdmodfacs> Corresponding eigenvalue: 9.9931E-10
Rdmodfacs> Eigenvector number: 2
Rdmodfacs> Corresponding eigenvalue: 9.9988E-10
Rdmodfacs> Eigenvector number: 3
Rdmodfacs> Corresponding eigenvalue: 9.9989E-10
Rdmodfacs> Eigenvector number: 4
Rdmodfacs> Corresponding eigenvalue: 1.0002E-09
Rdmodfacs> Eigenvector number: 5
Rdmodfacs> Corresponding eigenvalue: 1.0004E-09
Rdmodfacs> Eigenvector number: 6
Rdmodfacs> Corresponding eigenvalue: 1.0011E-09
Rdmodfacs> Eigenvector number: 7
Rdmodfacs> Corresponding eigenvalue: 1.430
Rdmodfacs> Eigenvector number: 8
Rdmodfacs> Corresponding eigenvalue: 1.756
Rdmodfacs> Eigenvector number: 9
Rdmodfacs> Corresponding eigenvalue: 3.373
Rdmodfacs> Eigenvector number: 10
Rdmodfacs> Corresponding eigenvalue: 3.586
Rdmodfacs> Eigenvector number: 11
Rdmodfacs> Corresponding eigenvalue: 3.881
Rdmodfacs> Eigenvector number: 12
Rdmodfacs> Corresponding eigenvalue: 4.680
Rdmodfacs> Eigenvector number: 13
Rdmodfacs> Corresponding eigenvalue: 6.395
Rdmodfacs> Eigenvector number: 14
Rdmodfacs> Corresponding eigenvalue: 6.626
Rdmodfacs> Eigenvector number: 15
Rdmodfacs> Corresponding eigenvalue: 6.887
Rdmodfacs> Eigenvector number: 16
Rdmodfacs> Corresponding eigenvalue: 7.333
Rdmodfacs> Eigenvector number: 17
Rdmodfacs> Corresponding eigenvalue: 7.901
Rdmodfacs> Eigenvector number: 18
Rdmodfacs> Corresponding eigenvalue: 8.651
Rdmodfacs> Eigenvector number: 19
Rdmodfacs> Corresponding eigenvalue: 9.507
Rdmodfacs> Eigenvector number: 20
Rdmodfacs> Corresponding eigenvalue: 9.845
Rdmodfacs> Eigenvector number: 21
Rdmodfacs> Corresponding eigenvalue: 10.25
Rdmodfacs> Eigenvector number: 22
Rdmodfacs> Corresponding eigenvalue: 10.35
Rdmodfacs> Eigenvector number: 23
Rdmodfacs> Corresponding eigenvalue: 10.49
Rdmodfacs> Eigenvector number: 24
Rdmodfacs> Corresponding eigenvalue: 11.33
Rdmodfacs> Eigenvector number: 25
Rdmodfacs> Corresponding eigenvalue: 12.13
Rdmodfacs> Eigenvector number: 26
Rdmodfacs> Corresponding eigenvalue: 12.30
Rdmodfacs> Eigenvector number: 27
Rdmodfacs> Corresponding eigenvalue: 12.52
Rdmodfacs> Eigenvector number: 28
Rdmodfacs> Corresponding eigenvalue: 13.72
Rdmodfacs> Eigenvector number: 29
Rdmodfacs> Corresponding eigenvalue: 14.17
Rdmodfacs> Eigenvector number: 30
Rdmodfacs> Corresponding eigenvalue: 14.41
Rdmodfacs> Eigenvector number: 31
Rdmodfacs> Corresponding eigenvalue: 14.90
Rdmodfacs> Eigenvector number: 32
Rdmodfacs> Corresponding eigenvalue: 15.40
Rdmodfacs> Eigenvector number: 33
Rdmodfacs> Corresponding eigenvalue: 15.92
Rdmodfacs> Eigenvector number: 34
Rdmodfacs> Corresponding eigenvalue: 16.49
Rdmodfacs> Eigenvector number: 35
Rdmodfacs> Corresponding eigenvalue: 16.77
Rdmodfacs> Eigenvector number: 36
Rdmodfacs> Corresponding eigenvalue: 17.13
Rdmodfacs> Eigenvector number: 37
Rdmodfacs> Corresponding eigenvalue: 18.01
Rdmodfacs> Eigenvector number: 38
Rdmodfacs> Corresponding eigenvalue: 18.24
Rdmodfacs> Eigenvector number: 39
Rdmodfacs> Corresponding eigenvalue: 19.52
Rdmodfacs> Eigenvector number: 40
Rdmodfacs> Corresponding eigenvalue: 19.84
Rdmodfacs> Eigenvector number: 41
Rdmodfacs> Corresponding eigenvalue: 20.32
Rdmodfacs> Eigenvector number: 42
Rdmodfacs> Corresponding eigenvalue: 21.22
Rdmodfacs> Eigenvector number: 43
Rdmodfacs> Corresponding eigenvalue: 21.68
Rdmodfacs> Eigenvector number: 44
Rdmodfacs> Corresponding eigenvalue: 21.84
Rdmodfacs> Eigenvector number: 45
Rdmodfacs> Corresponding eigenvalue: 23.52
Rdmodfacs> Eigenvector number: 46
Rdmodfacs> Corresponding eigenvalue: 24.01
Rdmodfacs> Eigenvector number: 47
Rdmodfacs> Corresponding eigenvalue: 24.42
Rdmodfacs> Eigenvector number: 48
Rdmodfacs> Corresponding eigenvalue: 24.70
Rdmodfacs> Eigenvector number: 49
Rdmodfacs> Corresponding eigenvalue: 24.95
Rdmodfacs> Eigenvector number: 50
Rdmodfacs> Corresponding eigenvalue: 25.23
Rdmodfacs> Eigenvector number: 51
Rdmodfacs> Corresponding eigenvalue: 25.88
Rdmodfacs> Eigenvector number: 52
Rdmodfacs> Corresponding eigenvalue: 26.05
Rdmodfacs> Eigenvector number: 53
Rdmodfacs> Corresponding eigenvalue: 26.88
Rdmodfacs> Eigenvector number: 54
Rdmodfacs> Corresponding eigenvalue: 27.28
Rdmodfacs> Eigenvector number: 55
Rdmodfacs> Corresponding eigenvalue: 27.55
Rdmodfacs> Eigenvector number: 56
Rdmodfacs> Corresponding eigenvalue: 27.83
Rdmodfacs> Eigenvector number: 57
Rdmodfacs> Corresponding eigenvalue: 28.31
Rdmodfacs> Eigenvector number: 58
Rdmodfacs> Corresponding eigenvalue: 29.21
Rdmodfacs> Eigenvector number: 59
Rdmodfacs> Corresponding eigenvalue: 29.35
Rdmodfacs> Eigenvector number: 60
Rdmodfacs> Corresponding eigenvalue: 29.94
Rdmodfacs> Eigenvector number: 61
Rdmodfacs> Corresponding eigenvalue: 30.40
Rdmodfacs> Eigenvector number: 62
Rdmodfacs> Corresponding eigenvalue: 31.27
Rdmodfacs> Eigenvector number: 63
Rdmodfacs> Corresponding eigenvalue: 31.78
Rdmodfacs> Eigenvector number: 64
Rdmodfacs> Corresponding eigenvalue: 32.67
Rdmodfacs> Eigenvector number: 65
Rdmodfacs> Corresponding eigenvalue: 32.99
Rdmodfacs> Eigenvector number: 66
Rdmodfacs> Corresponding eigenvalue: 33.34
Rdmodfacs> Eigenvector number: 67
Rdmodfacs> Corresponding eigenvalue: 33.93
Rdmodfacs> Eigenvector number: 68
Rdmodfacs> Corresponding eigenvalue: 33.97
Rdmodfacs> Eigenvector number: 69
Rdmodfacs> Corresponding eigenvalue: 36.18
Rdmodfacs> Eigenvector number: 70
Rdmodfacs> Corresponding eigenvalue: 36.48
Rdmodfacs> Eigenvector number: 71
Rdmodfacs> Corresponding eigenvalue: 36.55
Rdmodfacs> Eigenvector number: 72
Rdmodfacs> Corresponding eigenvalue: 37.77
Rdmodfacs> Eigenvector number: 73
Rdmodfacs> Corresponding eigenvalue: 37.94
Rdmodfacs> Eigenvector number: 74
Rdmodfacs> Corresponding eigenvalue: 38.38
Rdmodfacs> Eigenvector number: 75
Rdmodfacs> Corresponding eigenvalue: 39.14
Rdmodfacs> Eigenvector number: 76
Rdmodfacs> Corresponding eigenvalue: 39.35
Rdmodfacs> Eigenvector number: 77
Rdmodfacs> Corresponding eigenvalue: 40.17
Rdmodfacs> Eigenvector number: 78
Rdmodfacs> Corresponding eigenvalue: 40.91
Rdmodfacs> Eigenvector number: 79
Rdmodfacs> Corresponding eigenvalue: 41.31
Rdmodfacs> Eigenvector number: 80
Rdmodfacs> Corresponding eigenvalue: 41.93
Rdmodfacs> Eigenvector number: 81
Rdmodfacs> Corresponding eigenvalue: 42.22
Rdmodfacs> Eigenvector number: 82
Rdmodfacs> Corresponding eigenvalue: 42.84
Rdmodfacs> Eigenvector number: 83
Rdmodfacs> Corresponding eigenvalue: 42.87
Rdmodfacs> Eigenvector number: 84
Rdmodfacs> Corresponding eigenvalue: 43.37
Rdmodfacs> Eigenvector number: 85
Rdmodfacs> Corresponding eigenvalue: 44.05
Rdmodfacs> Eigenvector number: 86
Rdmodfacs> Corresponding eigenvalue: 44.62
Rdmodfacs> Eigenvector number: 87
Rdmodfacs> Corresponding eigenvalue: 44.85
Rdmodfacs> Eigenvector number: 88
Rdmodfacs> Corresponding eigenvalue: 45.42
Rdmodfacs> Eigenvector number: 89
Rdmodfacs> Corresponding eigenvalue: 45.94
Rdmodfacs> Eigenvector number: 90
Rdmodfacs> Corresponding eigenvalue: 46.17
Rdmodfacs> Eigenvector number: 91
Rdmodfacs> Corresponding eigenvalue: 46.70
Rdmodfacs> Eigenvector number: 92
Rdmodfacs> Corresponding eigenvalue: 47.28
Rdmodfacs> Eigenvector number: 93
Rdmodfacs> Corresponding eigenvalue: 47.92
Rdmodfacs> Eigenvector number: 94
Rdmodfacs> Corresponding eigenvalue: 48.10
Rdmodfacs> Eigenvector number: 95
Rdmodfacs> Corresponding eigenvalue: 48.18
Rdmodfacs> Eigenvector number: 96
Rdmodfacs> Corresponding eigenvalue: 49.19
Rdmodfacs> Eigenvector number: 97
Rdmodfacs> Corresponding eigenvalue: 49.75
Rdmodfacs> Eigenvector number: 98
Rdmodfacs> Corresponding eigenvalue: 49.91
Rdmodfacs> Eigenvector number: 99
Rdmodfacs> Corresponding eigenvalue: 50.75
Rdmodfacs> Eigenvector number: 100
Rdmodfacs> Corresponding eigenvalue: 50.87
Rdmodfacs> Eigenvector number: 101
Rdmodfacs> Corresponding eigenvalue: 50.95
Rdmodfacs> Eigenvector number: 102
Rdmodfacs> Corresponding eigenvalue: 51.27
Rdmodfacs> Eigenvector number: 103
Rdmodfacs> Corresponding eigenvalue: 51.60
Rdmodfacs> Eigenvector number: 104
Rdmodfacs> Corresponding eigenvalue: 52.37
Rdmodfacs> Eigenvector number: 105
Rdmodfacs> Corresponding eigenvalue: 52.45
Rdmodfacs> Eigenvector number: 106
Rdmodfacs> Corresponding eigenvalue: 53.02
Rtb_to_modes> 106 vectors, with 1152 coordinates in vector file.
Norm of eigenvectors in projected coordinates (one expected):
1.00000 1.00001 1.00001 1.00001 1.00000
1.00000 1.00002 1.00001 1.00002 1.00001
1.00001 1.00000 1.00000 0.99999 1.00000
1.00000 1.00000 1.00000 0.99997 1.00001
1.00000 0.99997 1.00000 0.99997 0.99999
1.00000 1.00001 0.99997 0.99999 1.00000
1.00002 1.00001 1.00000 1.00002 1.00002
1.00000 1.00001 1.00002 1.00001 1.00000
1.00000 1.00000 0.99999 1.00000 1.00002
0.99997 1.00000 1.00002 0.99999 1.00000
0.99999 0.99998 1.00000 1.00000 0.99999
0.99999 1.00001 1.00000 1.00000 1.00000
1.00000 1.00000 0.99999 1.00000 0.99999
1.00001 1.00000 0.99999 1.00002 1.00000
1.00000 0.99997 0.99999 0.99999 1.00000
1.00000 1.00000 1.00001 0.99998 1.00001
0.99999 1.00000 0.99999 1.00000 1.00000
1.00001 1.00000 1.00000 1.00002 0.99999
0.99999 1.00001 0.99998 1.00002 0.99999
1.00000 1.00001 1.00000 0.99999 1.00001
1.00002 1.00000 1.00001 1.00001 0.99998
1.00002
Rtb_to_modes> RTB block-file is being read.
Rtb_to_modes> 78912 lines found in RTB file.
Norm of eigenvectors in cartesian coordinates (one expected):
1.00000 1.00001 1.00001 1.00001 1.00000
1.00000 1.00002 1.00001 1.00002 1.00001
1.00001 1.00000 1.00000 0.99999 1.00000
1.00000 1.00000 1.00000 0.99997 1.00001
1.00000 0.99997 1.00000 0.99997 0.99999
1.00000 1.00001 0.99997 0.99999 1.00000
1.00002 1.00001 1.00000 1.00002 1.00002
1.00000 1.00001 1.00002 1.00001 1.00000
1.00000 1.00000 0.99999 1.00000 1.00002
0.99997 1.00000 1.00002 0.99999 1.00000
0.99999 0.99998 1.00000 1.00000 0.99999
0.99999 1.00001 1.00000 1.00000 1.00000
1.00000 1.00000 0.99999 1.00000 0.99999
1.00001 1.00000 0.99999 1.00002 1.00000
1.00000 0.99997 0.99999 0.99999 1.00000
1.00000 1.00000 1.00001 0.99998 1.00001
0.99999 1.00000 0.99999 1.00000 1.00000
1.00001 1.00000 1.00000 1.00002 0.99999
0.99999 1.00001 0.99998 1.00002 0.99999
1.00000 1.00001 1.00000 0.99999 1.00001
1.00002 1.00000 1.00001 1.00001 0.99998
1.00002
Orthogonality of first eigenvectors (zero expected):
Vector 2:-0.000
Vector 3: 0.000 0.000
Vector 4:-0.000 0.000-0.000
Vector 5:-0.000-0.000 0.000 0.000
Vector 6: 0.000-0.000 0.000-0.000 0.000
Vector 7:-0.000 0.000 0.000 0.000 0.000-0.000
Vector 8:-0.000 0.000 0.000-0.000-0.000 0.000 0.000
Vector 9:-0.000-0.000 0.000 0.000-0.000-0.000-0.000 0.000
Vector 10: 0.000 0.000 0.000 0.000-0.000-0.000-0.000-0.000-0.000
Rtb_to_modes> 106 eigenvectors saved.
Rtb_to_modes> Normal end.
Diagrtb> Normal end.
B-factor analysis
Bfactors> Version 1.22, Bordeaux.
Getnam> Eigenvector filename ?
Getnam> 2609110740143436876.eigenfacs
Openam> file on opening on unit 10:
2609110740143436876.eigenfacs
Getnam> Corresponding pdb filename ?
Getnam> 2609110740143436876.atom
Openam> file on opening on unit 11:
2609110740143436876.atom
Getnum> Number of skipped eigenvectors ?
Getnum> 0
Getnum> Number of usefull eigenvectors ?
Getnum> 10000
%Getnum-Err: number larger than 106 This is not allowed. Sorry.
Rdatompdb> Reading pdb file.
Rdatompdb> End of file reached.
Rdatompdb> Number of I/O errors: 0
Rdatompdb> Number of residues found = 574
First residue number = 1
Last residue number = 146
Number of atoms found = 4384
Mean number per residue = 7.6
Rdmodfacs> Old Blzpack file format detected.
Rdmodfacs> Numero du vecteur CERFACS en lecture: 1
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9931E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 2
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9988E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 3
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9989E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 4
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0002E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 5
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0004E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 6
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0011E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 7
Rdmodfacs> Valeur propre du vecteur en lecture: 1.430
Rdmodfacs> Numero du vecteur CERFACS en lecture: 8
Rdmodfacs> Valeur propre du vecteur en lecture: 1.756
Rdmodfacs> Numero du vecteur CERFACS en lecture: 9
Rdmodfacs> Valeur propre du vecteur en lecture: 3.373
Rdmodfacs> Numero du vecteur CERFACS en lecture: 10
Rdmodfacs> Valeur propre du vecteur en lecture: 3.586
Rdmodfacs> Numero du vecteur CERFACS en lecture: 11
Rdmodfacs> Valeur propre du vecteur en lecture: 3.881
Rdmodfacs> Numero du vecteur CERFACS en lecture: 12
Rdmodfacs> Valeur propre du vecteur en lecture: 4.680
Rdmodfacs> Numero du vecteur CERFACS en lecture: 13
Rdmodfacs> Valeur propre du vecteur en lecture: 6.395
Rdmodfacs> Numero du vecteur CERFACS en lecture: 14
Rdmodfacs> Valeur propre du vecteur en lecture: 6.626
Rdmodfacs> Numero du vecteur CERFACS en lecture: 15
Rdmodfacs> Valeur propre du vecteur en lecture: 6.887
Rdmodfacs> Numero du vecteur CERFACS en lecture: 16
Rdmodfacs> Valeur propre du vecteur en lecture: 7.333
Rdmodfacs> Numero du vecteur CERFACS en lecture: 17
Rdmodfacs> Valeur propre du vecteur en lecture: 7.901
Rdmodfacs> Numero du vecteur CERFACS en lecture: 18
Rdmodfacs> Valeur propre du vecteur en lecture: 8.651
Rdmodfacs> Numero du vecteur CERFACS en lecture: 19
Rdmodfacs> Valeur propre du vecteur en lecture: 9.507
Rdmodfacs> Numero du vecteur CERFACS en lecture: 20
Rdmodfacs> Valeur propre du vecteur en lecture: 9.845
Rdmodfacs> Numero du vecteur CERFACS en lecture: 21
Rdmodfacs> Valeur propre du vecteur en lecture: 10.25
Rdmodfacs> Numero du vecteur CERFACS en lecture: 22
Rdmodfacs> Valeur propre du vecteur en lecture: 10.35
Rdmodfacs> Numero du vecteur CERFACS en lecture: 23
Rdmodfacs> Valeur propre du vecteur en lecture: 10.49
Rdmodfacs> Numero du vecteur CERFACS en lecture: 24
Rdmodfacs> Valeur propre du vecteur en lecture: 11.33
Rdmodfacs> Numero du vecteur CERFACS en lecture: 25
Rdmodfacs> Valeur propre du vecteur en lecture: 12.13
Rdmodfacs> Numero du vecteur CERFACS en lecture: 26
Rdmodfacs> Valeur propre du vecteur en lecture: 12.30
Rdmodfacs> Numero du vecteur CERFACS en lecture: 27
Rdmodfacs> Valeur propre du vecteur en lecture: 12.52
Rdmodfacs> Numero du vecteur CERFACS en lecture: 28
Rdmodfacs> Valeur propre du vecteur en lecture: 13.72
Rdmodfacs> Numero du vecteur CERFACS en lecture: 29
Rdmodfacs> Valeur propre du vecteur en lecture: 14.17
Rdmodfacs> Numero du vecteur CERFACS en lecture: 30
Rdmodfacs> Valeur propre du vecteur en lecture: 14.41
Rdmodfacs> Numero du vecteur CERFACS en lecture: 31
Rdmodfacs> Valeur propre du vecteur en lecture: 14.90
Rdmodfacs> Numero du vecteur CERFACS en lecture: 32
Rdmodfacs> Valeur propre du vecteur en lecture: 15.40
Rdmodfacs> Numero du vecteur CERFACS en lecture: 33
Rdmodfacs> Valeur propre du vecteur en lecture: 15.92
Rdmodfacs> Numero du vecteur CERFACS en lecture: 34
Rdmodfacs> Valeur propre du vecteur en lecture: 16.49
Rdmodfacs> Numero du vecteur CERFACS en lecture: 35
Rdmodfacs> Valeur propre du vecteur en lecture: 16.77
Rdmodfacs> Numero du vecteur CERFACS en lecture: 36
Rdmodfacs> Valeur propre du vecteur en lecture: 17.13
Rdmodfacs> Numero du vecteur CERFACS en lecture: 37
Rdmodfacs> Valeur propre du vecteur en lecture: 18.01
Rdmodfacs> Numero du vecteur CERFACS en lecture: 38
Rdmodfacs> Valeur propre du vecteur en lecture: 18.24
Rdmodfacs> Numero du vecteur CERFACS en lecture: 39
Rdmodfacs> Valeur propre du vecteur en lecture: 19.52
Rdmodfacs> Numero du vecteur CERFACS en lecture: 40
Rdmodfacs> Valeur propre du vecteur en lecture: 19.84
Rdmodfacs> Numero du vecteur CERFACS en lecture: 41
Rdmodfacs> Valeur propre du vecteur en lecture: 20.32
Rdmodfacs> Numero du vecteur CERFACS en lecture: 42
Rdmodfacs> Valeur propre du vecteur en lecture: 21.22
Rdmodfacs> Numero du vecteur CERFACS en lecture: 43
Rdmodfacs> Valeur propre du vecteur en lecture: 21.68
Rdmodfacs> Numero du vecteur CERFACS en lecture: 44
Rdmodfacs> Valeur propre du vecteur en lecture: 21.84
Rdmodfacs> Numero du vecteur CERFACS en lecture: 45
Rdmodfacs> Valeur propre du vecteur en lecture: 23.52
Rdmodfacs> Numero du vecteur CERFACS en lecture: 46
Rdmodfacs> Valeur propre du vecteur en lecture: 24.01
Rdmodfacs> Numero du vecteur CERFACS en lecture: 47
Rdmodfacs> Valeur propre du vecteur en lecture: 24.42
Rdmodfacs> Numero du vecteur CERFACS en lecture: 48
Rdmodfacs> Valeur propre du vecteur en lecture: 24.70
Rdmodfacs> Numero du vecteur CERFACS en lecture: 49
Rdmodfacs> Valeur propre du vecteur en lecture: 24.95
Rdmodfacs> Numero du vecteur CERFACS en lecture: 50
Rdmodfacs> Valeur propre du vecteur en lecture: 25.23
Rdmodfacs> Numero du vecteur CERFACS en lecture: 51
Rdmodfacs> Valeur propre du vecteur en lecture: 25.88
Rdmodfacs> Numero du vecteur CERFACS en lecture: 52
Rdmodfacs> Valeur propre du vecteur en lecture: 26.05
Rdmodfacs> Numero du vecteur CERFACS en lecture: 53
Rdmodfacs> Valeur propre du vecteur en lecture: 26.88
Rdmodfacs> Numero du vecteur CERFACS en lecture: 54
Rdmodfacs> Valeur propre du vecteur en lecture: 27.28
Rdmodfacs> Numero du vecteur CERFACS en lecture: 55
Rdmodfacs> Valeur propre du vecteur en lecture: 27.55
Rdmodfacs> Numero du vecteur CERFACS en lecture: 56
Rdmodfacs> Valeur propre du vecteur en lecture: 27.83
Rdmodfacs> Numero du vecteur CERFACS en lecture: 57
Rdmodfacs> Valeur propre du vecteur en lecture: 28.31
Rdmodfacs> Numero du vecteur CERFACS en lecture: 58
Rdmodfacs> Valeur propre du vecteur en lecture: 29.21
Rdmodfacs> Numero du vecteur CERFACS en lecture: 59
Rdmodfacs> Valeur propre du vecteur en lecture: 29.35
Rdmodfacs> Numero du vecteur CERFACS en lecture: 60
Rdmodfacs> Valeur propre du vecteur en lecture: 29.94
Rdmodfacs> Numero du vecteur CERFACS en lecture: 61
Rdmodfacs> Valeur propre du vecteur en lecture: 30.40
Rdmodfacs> Numero du vecteur CERFACS en lecture: 62
Rdmodfacs> Valeur propre du vecteur en lecture: 31.27
Rdmodfacs> Numero du vecteur CERFACS en lecture: 63
Rdmodfacs> Valeur propre du vecteur en lecture: 31.78
Rdmodfacs> Numero du vecteur CERFACS en lecture: 64
Rdmodfacs> Valeur propre du vecteur en lecture: 32.67
Rdmodfacs> Numero du vecteur CERFACS en lecture: 65
Rdmodfacs> Valeur propre du vecteur en lecture: 32.99
Rdmodfacs> Numero du vecteur CERFACS en lecture: 66
Rdmodfacs> Valeur propre du vecteur en lecture: 33.34
Rdmodfacs> Numero du vecteur CERFACS en lecture: 67
Rdmodfacs> Valeur propre du vecteur en lecture: 33.93
Rdmodfacs> Numero du vecteur CERFACS en lecture: 68
Rdmodfacs> Valeur propre du vecteur en lecture: 33.97
Rdmodfacs> Numero du vecteur CERFACS en lecture: 69
Rdmodfacs> Valeur propre du vecteur en lecture: 36.18
Rdmodfacs> Numero du vecteur CERFACS en lecture: 70
Rdmodfacs> Valeur propre du vecteur en lecture: 36.48
Rdmodfacs> Numero du vecteur CERFACS en lecture: 71
Rdmodfacs> Valeur propre du vecteur en lecture: 36.55
Rdmodfacs> Numero du vecteur CERFACS en lecture: 72
Rdmodfacs> Valeur propre du vecteur en lecture: 37.77
Rdmodfacs> Numero du vecteur CERFACS en lecture: 73
Rdmodfacs> Valeur propre du vecteur en lecture: 37.94
Rdmodfacs> Numero du vecteur CERFACS en lecture: 74
Rdmodfacs> Valeur propre du vecteur en lecture: 38.38
Rdmodfacs> Numero du vecteur CERFACS en lecture: 75
Rdmodfacs> Valeur propre du vecteur en lecture: 39.14
Rdmodfacs> Numero du vecteur CERFACS en lecture: 76
Rdmodfacs> Valeur propre du vecteur en lecture: 39.35
Rdmodfacs> Numero du vecteur CERFACS en lecture: 77
Rdmodfacs> Valeur propre du vecteur en lecture: 40.17
Rdmodfacs> Numero du vecteur CERFACS en lecture: 78
Rdmodfacs> Valeur propre du vecteur en lecture: 40.91
Rdmodfacs> Numero du vecteur CERFACS en lecture: 79
Rdmodfacs> Valeur propre du vecteur en lecture: 41.31
Rdmodfacs> Numero du vecteur CERFACS en lecture: 80
Rdmodfacs> Valeur propre du vecteur en lecture: 41.93
Rdmodfacs> Numero du vecteur CERFACS en lecture: 81
Rdmodfacs> Valeur propre du vecteur en lecture: 42.22
Rdmodfacs> Numero du vecteur CERFACS en lecture: 82
Rdmodfacs> Valeur propre du vecteur en lecture: 42.84
Rdmodfacs> Numero du vecteur CERFACS en lecture: 83
Rdmodfacs> Valeur propre du vecteur en lecture: 42.87
Rdmodfacs> Numero du vecteur CERFACS en lecture: 84
Rdmodfacs> Valeur propre du vecteur en lecture: 43.37
Rdmodfacs> Numero du vecteur CERFACS en lecture: 85
Rdmodfacs> Valeur propre du vecteur en lecture: 44.05
Rdmodfacs> Numero du vecteur CERFACS en lecture: 86
Rdmodfacs> Valeur propre du vecteur en lecture: 44.62
Rdmodfacs> Numero du vecteur CERFACS en lecture: 87
Rdmodfacs> Valeur propre du vecteur en lecture: 44.85
Rdmodfacs> Numero du vecteur CERFACS en lecture: 88
Rdmodfacs> Valeur propre du vecteur en lecture: 45.42
Rdmodfacs> Numero du vecteur CERFACS en lecture: 89
Rdmodfacs> Valeur propre du vecteur en lecture: 45.94
Rdmodfacs> Numero du vecteur CERFACS en lecture: 90
Rdmodfacs> Valeur propre du vecteur en lecture: 46.17
Rdmodfacs> Numero du vecteur CERFACS en lecture: 91
Rdmodfacs> Valeur propre du vecteur en lecture: 46.70
Rdmodfacs> Numero du vecteur CERFACS en lecture: 92
Rdmodfacs> Valeur propre du vecteur en lecture: 47.28
Rdmodfacs> Numero du vecteur CERFACS en lecture: 93
Rdmodfacs> Valeur propre du vecteur en lecture: 47.92
Rdmodfacs> Numero du vecteur CERFACS en lecture: 94
Rdmodfacs> Valeur propre du vecteur en lecture: 48.10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 95
Rdmodfacs> Valeur propre du vecteur en lecture: 48.18
Rdmodfacs> Numero du vecteur CERFACS en lecture: 96
Rdmodfacs> Valeur propre du vecteur en lecture: 49.19
Rdmodfacs> Numero du vecteur CERFACS en lecture: 97
Rdmodfacs> Valeur propre du vecteur en lecture: 49.75
Rdmodfacs> Numero du vecteur CERFACS en lecture: 98
Rdmodfacs> Valeur propre du vecteur en lecture: 49.91
Rdmodfacs> Numero du vecteur CERFACS en lecture: 99
Rdmodfacs> Valeur propre du vecteur en lecture: 50.75
Rdmodfacs> Numero du vecteur CERFACS en lecture: 100
Rdmodfacs> Valeur propre du vecteur en lecture: 50.87
Rdmodfacs> Numero du vecteur CERFACS en lecture: 101
Rdmodfacs> Valeur propre du vecteur en lecture: 50.95
Rdmodfacs> Numero du vecteur CERFACS en lecture: 102
Rdmodfacs> Valeur propre du vecteur en lecture: 51.27
Rdmodfacs> Numero du vecteur CERFACS en lecture: 103
Rdmodfacs> Valeur propre du vecteur en lecture: 51.60
Rdmodfacs> Numero du vecteur CERFACS en lecture: 104
Rdmodfacs> Valeur propre du vecteur en lecture: 52.37
Rdmodfacs> Numero du vecteur CERFACS en lecture: 105
Rdmodfacs> Valeur propre du vecteur en lecture: 52.45
Rdmodfacs> Numero du vecteur CERFACS en lecture: 106
Rdmodfacs> Valeur propre du vecteur en lecture: 53.02
Bfactors> 106 vectors, 13152 coordinates in file.
Openam> file on opening on unit 12:
bfactors.pred
Bfactors> Best zero-eigenvalue found : 0.000000
Bfactors> 6 eigenvalues less than : 0.000000
Bfactors> Lowest non-zero eigenvalue : 1.430000
Bfactors> 100 eigenvectors will be considered.
Bfactors> Rotation-Tranlation modes are skipped.
Bfactors> Mass-weighted B-factors are computed.
(CHARMM units assumed for eigenvalues)
Bfactors> Correlation= 0.743 for 574 C-alpha atoms.
Bfactors> = 0.023 +/- 0.01
Bfactors> = 20.229 +/- 9.31
Bfactors> Shiftng-fct= 20.206
Bfactors> Scaling-fct= 636.339
Bfactors> Predicted, Scaled and Experimental B-factors are saved.
Bfactors> Normal end.
check_modes
Chkmod> Version 1.00, Bordeaux.
Getnam> Eigenvector filename ?
Getnam> 2609110740143436876.eigenfacs
Openam> file on opening on unit 10:
2609110740143436876.eigenfacs
Rdmodfacs> Old Blzpack file format detected.
Rdmodfacs> Numero du vecteur CERFACS en lecture: 1
Rdmodfacs> Frequence du vecteur en lecture: 3.4326E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 2
Rdmodfacs> Frequence du vecteur en lecture: 3.4336E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 3
Rdmodfacs> Frequence du vecteur en lecture: 3.4336E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 4
Rdmodfacs> Frequence du vecteur en lecture: 3.4342E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 5
Rdmodfacs> Frequence du vecteur en lecture: 3.4345E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 6
Rdmodfacs> Frequence du vecteur en lecture: 3.4357E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 7
Rdmodfacs> Frequence du vecteur en lecture: 129.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 8
Rdmodfacs> Frequence du vecteur en lecture: 143.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 9
Rdmodfacs> Frequence du vecteur en lecture: 199.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 10
Rdmodfacs> Frequence du vecteur en lecture: 205.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 11
Rdmodfacs> Frequence du vecteur en lecture: 213.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 12
Rdmodfacs> Frequence du vecteur en lecture: 234.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 13
Rdmodfacs> Frequence du vecteur en lecture: 274.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 14
Rdmodfacs> Frequence du vecteur en lecture: 279.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 15
Rdmodfacs> Frequence du vecteur en lecture: 285.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 16
Rdmodfacs> Frequence du vecteur en lecture: 294.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 17
Rdmodfacs> Frequence du vecteur en lecture: 305.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 18
Rdmodfacs> Frequence du vecteur en lecture: 319.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 19
Rdmodfacs> Frequence du vecteur en lecture: 334.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 20
Rdmodfacs> Frequence du vecteur en lecture: 340.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 21
Rdmodfacs> Frequence du vecteur en lecture: 347.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 22
Rdmodfacs> Frequence du vecteur en lecture: 349.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 23
Rdmodfacs> Frequence du vecteur en lecture: 351.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 24
Rdmodfacs> Frequence du vecteur en lecture: 365.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 25
Rdmodfacs> Frequence du vecteur en lecture: 378.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 26
Rdmodfacs> Frequence du vecteur en lecture: 380.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 27
Rdmodfacs> Frequence du vecteur en lecture: 384.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 28
Rdmodfacs> Frequence du vecteur en lecture: 402.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 29
Rdmodfacs> Frequence du vecteur en lecture: 408.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 30
Rdmodfacs> Frequence du vecteur en lecture: 412.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 31
Rdmodfacs> Frequence du vecteur en lecture: 419.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 32
Rdmodfacs> Frequence du vecteur en lecture: 426.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 33
Rdmodfacs> Frequence du vecteur en lecture: 433.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 34
Rdmodfacs> Frequence du vecteur en lecture: 440.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 35
Rdmodfacs> Frequence du vecteur en lecture: 444.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 36
Rdmodfacs> Frequence du vecteur en lecture: 449.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 37
Rdmodfacs> Frequence du vecteur en lecture: 460.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 38
Rdmodfacs> Frequence du vecteur en lecture: 463.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 39
Rdmodfacs> Frequence du vecteur en lecture: 479.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 40
Rdmodfacs> Frequence du vecteur en lecture: 483.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 41
Rdmodfacs> Frequence du vecteur en lecture: 489.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 42
Rdmodfacs> Frequence du vecteur en lecture: 500.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 43
Rdmodfacs> Frequence du vecteur en lecture: 505.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 44
Rdmodfacs> Frequence du vecteur en lecture: 507.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 45
Rdmodfacs> Frequence du vecteur en lecture: 526.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 46
Rdmodfacs> Frequence du vecteur en lecture: 532.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 47
Rdmodfacs> Frequence du vecteur en lecture: 536.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 48
Rdmodfacs> Frequence du vecteur en lecture: 539.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 49
Rdmodfacs> Frequence du vecteur en lecture: 542.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 50
Rdmodfacs> Frequence du vecteur en lecture: 545.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 51
Rdmodfacs> Frequence du vecteur en lecture: 552.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 52
Rdmodfacs> Frequence du vecteur en lecture: 554.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 53
Rdmodfacs> Frequence du vecteur en lecture: 563.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 54
Rdmodfacs> Frequence du vecteur en lecture: 567.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 55
Rdmodfacs> Frequence du vecteur en lecture: 570.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 56
Rdmodfacs> Frequence du vecteur en lecture: 572.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 57
Rdmodfacs> Frequence du vecteur en lecture: 577.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 58
Rdmodfacs> Frequence du vecteur en lecture: 586.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 59
Rdmodfacs> Frequence du vecteur en lecture: 588.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 60
Rdmodfacs> Frequence du vecteur en lecture: 594.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 61
Rdmodfacs> Frequence du vecteur en lecture: 598.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 62
Rdmodfacs> Frequence du vecteur en lecture: 607.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 63
Rdmodfacs> Frequence du vecteur en lecture: 612.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 64
Rdmodfacs> Frequence du vecteur en lecture: 620.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 65
Rdmodfacs> Frequence du vecteur en lecture: 623.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 66
Rdmodfacs> Frequence du vecteur en lecture: 627.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 67
Rdmodfacs> Frequence du vecteur en lecture: 632.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 68
Rdmodfacs> Frequence du vecteur en lecture: 632.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 69
Rdmodfacs> Frequence du vecteur en lecture: 653.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 70
Rdmodfacs> Frequence du vecteur en lecture: 655.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 71
Rdmodfacs> Frequence du vecteur en lecture: 656.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 72
Rdmodfacs> Frequence du vecteur en lecture: 667.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 73
Rdmodfacs> Frequence du vecteur en lecture: 668.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 74
Rdmodfacs> Frequence du vecteur en lecture: 672.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 75
Rdmodfacs> Frequence du vecteur en lecture: 679.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 76
Rdmodfacs> Frequence du vecteur en lecture: 681.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 77
Rdmodfacs> Frequence du vecteur en lecture: 688.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 78
Rdmodfacs> Frequence du vecteur en lecture: 694.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 79
Rdmodfacs> Frequence du vecteur en lecture: 697.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 80
Rdmodfacs> Frequence du vecteur en lecture: 703.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 81
Rdmodfacs> Frequence du vecteur en lecture: 705.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 82
Rdmodfacs> Frequence du vecteur en lecture: 710.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 83
Rdmodfacs> Frequence du vecteur en lecture: 711.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 84
Rdmodfacs> Frequence du vecteur en lecture: 715.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 85
Rdmodfacs> Frequence du vecteur en lecture: 720.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 86
Rdmodfacs> Frequence du vecteur en lecture: 725.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 87
Rdmodfacs> Frequence du vecteur en lecture: 727.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 88
Rdmodfacs> Frequence du vecteur en lecture: 731.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 89
Rdmodfacs> Frequence du vecteur en lecture: 736.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 90
Rdmodfacs> Frequence du vecteur en lecture: 737.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 91
Rdmodfacs> Frequence du vecteur en lecture: 742.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 92
Rdmodfacs> Frequence du vecteur en lecture: 746.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 93
Rdmodfacs> Frequence du vecteur en lecture: 751.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 94
Rdmodfacs> Frequence du vecteur en lecture: 753.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 95
Rdmodfacs> Frequence du vecteur en lecture: 753.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 96
Rdmodfacs> Frequence du vecteur en lecture: 761.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 97
Rdmodfacs> Frequence du vecteur en lecture: 765.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 98
Rdmodfacs> Frequence du vecteur en lecture: 767.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 99
Rdmodfacs> Frequence du vecteur en lecture: 773.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 100
Rdmodfacs> Frequence du vecteur en lecture: 774.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 101
Rdmodfacs> Frequence du vecteur en lecture: 775.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 102
Rdmodfacs> Frequence du vecteur en lecture: 777.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 103
Rdmodfacs> Frequence du vecteur en lecture: 780.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 104
Rdmodfacs> Frequence du vecteur en lecture: 785.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 105
Rdmodfacs> Frequence du vecteur en lecture: 786.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 106
Rdmodfacs> Frequence du vecteur en lecture: 790.7
Chkmod> 106 vectors, 13152 coordinates in file.
Chkmod> That is: 4384 cartesian points.
Openam> file on opening on unit 11:
Chkmod.res
Chkmod> Collectivity=f(frequency) to be written in this file.
Chkmod> Normal end.
0.0034 0.9552
0.0034 0.7887
0.0034 0.8188
0.0034 0.8311
0.0034 0.7924
0.0034 0.9881
129.8508 0.5194
143.8927 0.6113
199.4274 0.7406
205.6278 0.6770
213.9186 0.5993
234.9089 0.5458
274.5977 0.6317
279.5132 0.6118
284.9651 0.6766
294.0475 0.5568
305.2233 0.6110
319.3815 0.5827
334.8100 0.3765
340.7097 0.4687
347.6471 0.5802
349.3388 0.6184
351.6935 0.3840
365.5035 0.5948
378.1874 0.4948
380.8283 0.4217
384.2190 0.6139
402.2108 0.4509
408.7536 0.6282
412.2006 0.4767
419.1503 0.3624
426.1250 0.5525
433.2596 0.4857
440.9476 0.4431
444.6755 0.6369
449.4230 0.6041
460.8223 0.6193
463.7555 0.4198
479.7517 0.4533
483.6681 0.5429
489.4840 0.5548
500.2065 0.6296
505.5991 0.7023
507.4613 0.5425
526.6175 0.5777
532.0748 0.5587
536.5985 0.5927
539.6661 0.5890
542.3903 0.5318
545.4253 0.6028
552.4065 0.5509
554.2178 0.4591
562.9778 0.5591
567.1512 0.5725
569.9509 0.4737
572.8399 0.5406
577.7588 0.6028
586.8707 0.5765
588.2754 0.5669
594.1588 0.5751
598.7057 0.5840
607.2123 0.4102
612.1440 0.4176
620.6564 0.5180
623.6886 0.5654
626.9883 0.4678
632.5117 0.5469
632.8844 0.4352
653.1470 0.3687
655.8493 0.4610
656.4782 0.3588
667.3446 0.4632
668.8447 0.5518
672.7119 0.5689
679.3398 0.5335
681.1598 0.4935
688.2204 0.4699
694.5306 0.5679
697.9177 0.4549
703.1356 0.4307
705.5629 0.4464
710.7246 0.5075
710.9734 0.3939
715.1075 0.5649
720.6918 0.4529
725.3397 0.4529
727.2067 0.4802
731.8131 0.5748
735.9904 0.5396
737.8304 0.4211
742.0533 0.5366
746.6471 0.5013
751.6835 0.3892
753.0940 0.3778
753.7200 0.4695
761.5792 0.4689
765.9020 0.4008
767.1326 0.4665
773.5612 0.4875
774.4752 0.5129
775.0839 0.4998
777.5141 0.4978
780.0124 0.3837
785.8107 0.3827
786.4106 0.4385
790.6723 0.5635
getting mode 7
running: ../../bin/get_modes.sh 2609110740143436876 7 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 7
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 8
running: ../../bin/get_modes.sh 2609110740143436876 8 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 8
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 9
running: ../../bin/get_modes.sh 2609110740143436876 9 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 9
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 10
running: ../../bin/get_modes.sh 2609110740143436876 10 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 10
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 11
running: ../../bin/get_modes.sh 2609110740143436876 11 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 11
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 12
running: ../../bin/get_modes.sh 2609110740143436876 12 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 12
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 13
running: ../../bin/get_modes.sh 2609110740143436876 13 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 13
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 14
running: ../../bin/get_modes.sh 2609110740143436876 14 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 14
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 15
running: ../../bin/get_modes.sh 2609110740143436876 15 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 15
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 16
running: ../../bin/get_modes.sh 2609110740143436876 16 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 16
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 17
running: ../../bin/get_modes.sh 2609110740143436876 17 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 17
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.17.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.17.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.17.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 18
running: ../../bin/get_modes.sh 2609110740143436876 18 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 18
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.18.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.18.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.18.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 19
running: ../../bin/get_modes.sh 2609110740143436876 19 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 19
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.19.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.19.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.19.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 20
running: ../../bin/get_modes.sh 2609110740143436876 20 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 20
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.20.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.20.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.20.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 21
running: ../../bin/get_modes.sh 2609110740143436876 21 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 21
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.21.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.21.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.21.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 22
running: ../../bin/get_modes.sh 2609110740143436876 22 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 22
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.22.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.22.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.22.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 23
running: ../../bin/get_modes.sh 2609110740143436876 23 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 23
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.23.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.23.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.23.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 24
running: ../../bin/get_modes.sh 2609110740143436876 24 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 24
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.24.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.24.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.24.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 25
running: ../../bin/get_modes.sh 2609110740143436876 25 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 25
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.25.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.25.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.25.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 26
running: ../../bin/get_modes.sh 2609110740143436876 26 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 26
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.26.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.26.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.26.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 27
running: ../../bin/get_modes.sh 2609110740143436876 27 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 27
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.27.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.27.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.27.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 28
running: ../../bin/get_modes.sh 2609110740143436876 28 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 28
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.28.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.28.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.28.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 29
running: ../../bin/get_modes.sh 2609110740143436876 29 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 29
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.29.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.29.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.29.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 30
running: ../../bin/get_modes.sh 2609110740143436876 30 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 30
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.30.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.30.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.30.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 31
running: ../../bin/get_modes.sh 2609110740143436876 31 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 31
calculating perturbed structure for DQ=-100
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=-20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=0
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=20
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=40
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=60
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=80
2609110740143436876.eigenfacs
2609110740143436876.atom
calculating perturbed structure for DQ=100
2609110740143436876.eigenfacs
2609110740143436876.atom
making animated gifs
11 models are in 2609110740143436876.31.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.31.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2609110740143436876.31.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
2609110740143436876.10.pdb
2609110740143436876.11.pdb
2609110740143436876.12.pdb
2609110740143436876.13.pdb
2609110740143436876.14.pdb
2609110740143436876.15.pdb
2609110740143436876.16.pdb
2609110740143436876.17.pdb
2609110740143436876.18.pdb
2609110740143436876.19.pdb
2609110740143436876.20.pdb
2609110740143436876.21.pdb
2609110740143436876.22.pdb
2609110740143436876.23.pdb
2609110740143436876.24.pdb
2609110740143436876.25.pdb
2609110740143436876.26.pdb
2609110740143436876.27.pdb
2609110740143436876.28.pdb
2609110740143436876.29.pdb
2609110740143436876.30.pdb
2609110740143436876.31.pdb
2609110740143436876.7.pdb
2609110740143436876.8.pdb
2609110740143436876.9.pdb
STDERR:
Note: The following floating-point exceptions are signalling: IEEE_DENORMAL
real 0m30.936s
user 0m30.777s
sys 0m0.148s
rm: cannot remove '2609110740143436876.sdijf': No such file or directory
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elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.
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