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***  CELL CYCLE 20-JAN-12 3VO9  ***

Normal Mode Analysis for ID 260913204707142289

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 1 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5205
mode 8 1.15 0.6378
mode 9 1.23 0.6093
mode 10 1.55 0.0718
mode 11 1.62 0.3275
mode 12 1.74 0.1537
mode 13 1.83 0.5048
mode 14 1.98 0.1999
mode 15 2.03 0.1196
mode 16 2.13 0.4728
mode 17 2.24 0.3863
mode 18 2.33 0.1972
mode 19 2.44 0.4997
mode 20 2.57 0.3905
mode 21 2.59 0.2543
mode 22 2.73 0.2672
mode 23 2.76 0.2853
mode 24 2.84 0.5746
mode 25 2.94 0.4123
mode 26 3.02 0.4072
mode 27 3.04 0.3982
mode 28 3.05 0.4692
mode 29 3.09 0.1405
mode 30 3.13 0.4296
mode 31 3.23 0.4666
mode 32 3.27 0.3559
mode 33 3.32 0.3596
mode 34 3.35 0.3937
mode 35 3.43 0.2431
mode 36 3.46 0.2597
mode 37 3.55 0.4085
mode 38 3.58 0.3078
mode 39 3.64 0.3914
mode 40 3.65 0.2545
mode 41 3.65 0.4278
mode 42 3.75 0.4095
mode 43 3.77 0.4940
mode 44 3.78 0.4586
mode 45 3.84 0.2477
mode 46 3.88 0.3814
mode 47 3.90 0.2760
mode 48 3.92 0.2919
mode 49 3.96 0.3693
mode 50 4.01 0.2295
mode 51 4.03 0.3767
mode 52 4.05 0.4126
mode 53 4.12 0.3634
mode 54 4.18 0.3690
mode 55 4.19 0.2171
mode 56 4.24 0.3743
mode 57 4.26 0.4218
mode 58 4.28 0.3182
mode 59 4.31 0.5606
mode 60 4.35 0.3379
mode 61 4.38 0.4846
mode 62 4.41 0.4969
mode 63 4.44 0.3576
mode 64 4.47 0.4165
mode 65 4.50 0.4894
mode 66 4.55 0.3450
mode 67 4.59 0.4029
mode 68 4.63 0.4548
mode 69 4.63 0.3685
mode 70 4.69 0.4465
mode 71 4.74 0.4449
mode 72 4.78 0.4351
mode 73 4.81 0.4967
mode 74 4.83 0.4744
mode 75 4.88 0.3410
mode 76 4.89 0.3361
mode 77 4.90 0.4411
mode 78 4.94 0.4877
mode 79 4.96 0.4094
mode 80 5.00 0.4123
mode 81 5.05 0.3458
mode 82 5.08 0.4357
mode 83 5.11 0.4773
mode 84 5.14 0.6362
mode 85 5.16 0.4880
mode 86 5.20 0.3807
mode 87 5.23 0.4169
mode 88 5.26 0.4932
mode 89 5.28 0.4755
mode 90 5.32 0.5331
mode 91 5.33 0.5419
mode 92 5.38 0.4079
mode 93 5.40 0.4452
mode 94 5.42 0.3555
mode 95 5.44 0.5070
mode 96 5.49 0.4158
mode 97 5.51 0.4631
mode 98 5.53 0.4303
mode 99 5.55 0.4612
mode 100 5.56 0.4927
mode 101 5.58 0.4255
mode 102 5.63 0.3963
mode 103 5.65 0.4455
mode 104 5.67 0.1199
mode 105 5.69 0.4502
mode 106 5.69 0.4958

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.