Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* PROTEIN FIBRIL 27-JUN-18 6A6B *

<R²> analysis for 260913220433158305

--- normal mode 9 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.0498
VAL 37 0.0316
LEU 38 0.0295
TYR 39 0.0252
VAL 40 0.0238
GLY 41 0.0198
SER 42 0.0196
LYS 43 0.0158
THR 44 0.0136
LYS 45 0.0099
GLU 46 0.0089
GLY 47 0.0077
VAL 48 0.0072
VAL 49 0.0049
HIS 50 0.0044
GLY 51 0.0034
VAL 52 0.0029
ALA 53 0.0022
THR 54 0.0019
VAL 55 0.0021
ALA 56 0.0018
GLU 57 0.0032
LYS 58 0.0029
THR 59 0.0035
LYS 60 0.0041
GLU 61 0.0058
GLN 62 0.0069
VAL 63 0.0075
THR 64 0.0089
ASN 65 0.0103
VAL 66 0.0119
GLY 67 0.0123
GLY 68 0.0107
ALA 69 0.0091
VAL 70 0.0078
VAL 71 0.0066
THR 72 0.0060
GLY 73 0.0048
VAL 74 0.0046
THR 75 0.0047
ALA 76 0.0049
VAL 77 0.0056
ALA 78 0.0063
GLN 79 0.0074
LYS 80 0.0081
THR 81 0.0082
VAL 82 0.0089
GLU 83 0.0084
GLY 84 0.0078
ALA 85 0.0062
GLY 86 0.0060
SER 87 0.0053
ILE 88 0.0055
ALA 89 0.0053
ALA 90 0.0058
ALA 91 0.0076
THR 92 0.0090
GLY 93 0.0108
PHE 94 0.0124
VAL 95 0.0126
LYS 96 0.0149
LYS 97 0.0165
ASP 98 0.0230
GLN 99 0.0280
VAL 37 0.0302
LEU 38 0.0279
TYR 39 0.0238
VAL 40 0.0220
GLY 41 0.0181
SER 42 0.0186
LYS 43 0.0149
THR 44 0.0121
LYS 45 0.0089
GLU 46 0.0077
GLY 47 0.0061
VAL 48 0.0058
VAL 49 0.0042
HIS 50 0.0040
GLY 51 0.0032
VAL 52 0.0024
ALA 53 0.0020
THR 54 0.0018
VAL 55 0.0019
ALA 56 0.0017
GLU 57 0.0023
LYS 58 0.0019
THR 59 0.0025
LYS 60 0.0032
GLU 61 0.0043
GLN 62 0.0056
VAL 63 0.0064
THR 64 0.0080
ASN 65 0.0093
VAL 66 0.0109
GLY 67 0.0113
GLY 68 0.0097
ALA 69 0.0082
VAL 70 0.0068
VAL 71 0.0054
THR 72 0.0045
GLY 73 0.0032
VAL 74 0.0030
THR 75 0.0029
ALA 76 0.0033
VAL 77 0.0038
ALA 78 0.0047
GLN 79 0.0056
LYS 80 0.0063
THR 81 0.0063
VAL 82 0.0071
GLU 83 0.0065
GLY 84 0.0057
ALA 85 0.0042
GLY 86 0.0040
SER 87 0.0033
ILE 88 0.0034
ALA 89 0.0035
ALA 90 0.0047
ALA 91 0.0065
THR 92 0.0083
GLY 93 0.0100
PHE 94 0.0118
VAL 95 0.0121
LYS 96 0.0146
LYS 97 0.0174
ASP 98 0.0248
GLN 99 0.0310
VAL 37 0.0291
LEU 38 0.0265
TYR 39 0.0227
VAL 40 0.0204
GLY 41 0.0169
SER 42 0.0178
LYS 43 0.0145
THR 44 0.0114
LYS 45 0.0084
GLU 46 0.0070
GLY 47 0.0052
VAL 48 0.0050
VAL 49 0.0037
HIS 50 0.0037
GLY 51 0.0031
VAL 52 0.0022
ALA 53 0.0020
THR 54 0.0017
VAL 55 0.0018
ALA 56 0.0015
GLU 57 0.0018
LYS 58 0.0013
THR 59 0.0018
LYS 60 0.0027
GLU 61 0.0034
GLN 62 0.0049
VAL 63 0.0057
THR 64 0.0074
ASN 65 0.0087
VAL 66 0.0102
GLY 67 0.0107
GLY 68 0.0092
ALA 69 0.0076
VAL 70 0.0062
VAL 71 0.0047
THR 72 0.0036
GLY 73 0.0021
VAL 74 0.0016
THR 75 0.0013
ALA 76 0.0021
VAL 77 0.0023
ALA 78 0.0034
GLN 79 0.0041
LYS 80 0.0050
THR 81 0.0048
VAL 82 0.0058
GLU 83 0.0051
GLY 84 0.0040
ALA 85 0.0024
GLY 86 0.0021
SER 87 0.0018
ILE 88 0.0017
ALA 89 0.0027
ALA 90 0.0044
ALA 91 0.0062
THR 92 0.0081
GLY 93 0.0098
PHE 94 0.0118
VAL 95 0.0124
LYS 96 0.0151
LYS 97 0.0191
ASP 98 0.0272
GLN 99 0.0345
VAL 37 0.0283
LEU 38 0.0255
TYR 39 0.0219
VAL 40 0.0192
GLY 41 0.0161
SER 42 0.0175
LYS 43 0.0145
THR 44 0.0112
LYS 45 0.0084
GLU 46 0.0069
GLY 47 0.0049
VAL 48 0.0049
VAL 49 0.0037
HIS 50 0.0037
GLY 51 0.0031
VAL 52 0.0023
ALA 53 0.0019
THR 54 0.0016
VAL 55 0.0016
ALA 56 0.0012
GLU 57 0.0012
LYS 58 0.0006
THR 59 0.0012
LYS 60 0.0023
GLU 61 0.0029
GLN 62 0.0045
VAL 63 0.0055
THR 64 0.0071
ASN 65 0.0084
VAL 66 0.0100
GLY 67 0.0106
GLY 68 0.0092
ALA 69 0.0075
VAL 70 0.0062
VAL 71 0.0046
THR 72 0.0035
GLY 73 0.0022
VAL 74 0.0010
THR 75 0.0006
ALA 76 0.0017
VAL 77 0.0015
ALA 78 0.0029
GLN 79 0.0031
LYS 80 0.0042
THR 81 0.0039
VAL 82 0.0049
GLU 83 0.0041
GLY 84 0.0026
ALA 85 0.0009
GLY 86 0.0004
SER 87 0.0014
ILE 88 0.0012
ALA 89 0.0033
ALA 90 0.0050
ALA 91 0.0066
THR 92 0.0085
GLY 93 0.0100
PHE 94 0.0123
VAL 95 0.0133
LYS 96 0.0161
LYS 97 0.0213
ASP 98 0.0301
GLN 99 0.0383
VAL 37 0.0278
LEU 38 0.0248
TYR 39 0.0215
VAL 40 0.0185
GLY 41 0.0156
SER 42 0.0175
LYS 43 0.0149
THR 44 0.0117
LYS 45 0.0090
GLU 46 0.0076
GLY 47 0.0056
VAL 48 0.0056
VAL 49 0.0041
HIS 50 0.0039
GLY 51 0.0033
VAL 52 0.0027
ALA 53 0.0020
THR 54 0.0015
VAL 55 0.0014
ALA 56 0.0010
GLU 57 0.0010
LYS 58 0.0007
THR 59 0.0009
LYS 60 0.0022
GLU 61 0.0030
GLN 62 0.0045
VAL 63 0.0056
THR 64 0.0071
ASN 65 0.0085
VAL 66 0.0101
GLY 67 0.0108
GLY 68 0.0096
ALA 69 0.0079
VAL 70 0.0067
VAL 71 0.0053
THR 72 0.0043
GLY 73 0.0032
VAL 74 0.0020
THR 75 0.0021
ALA 76 0.0026
VAL 77 0.0023
ALA 78 0.0034
GLN 79 0.0032
LYS 80 0.0043
THR 81 0.0038
VAL 82 0.0048
GLU 83 0.0039
GLY 84 0.0023
ALA 85 0.0016
GLY 86 0.0017
SER 87 0.0029
ILE 88 0.0027
ALA 89 0.0050
ALA 90 0.0063
ALA 91 0.0077
THR 92 0.0094
GLY 93 0.0106
PHE 94 0.0131
VAL 95 0.0146
LYS 96 0.0174
LYS 97 0.0237
ASP 98 0.0330
GLN 99 0.0421
VAL 37 0.0277
LEU 38 0.0245
TYR 39 0.0215
VAL 40 0.0181
GLY 41 0.0156
SER 42 0.0180
LYS 43 0.0159
THR 44 0.0127
LYS 45 0.0104
GLU 46 0.0090
GLY 47 0.0070
VAL 48 0.0071
VAL 49 0.0048
HIS 50 0.0044
GLY 51 0.0038
VAL 52 0.0035
ALA 53 0.0024
THR 54 0.0018
VAL 55 0.0018
ALA 56 0.0015
GLU 57 0.0021
LYS 58 0.0022
THR 59 0.0020
LYS 60 0.0028
GLU 61 0.0039
GLN 62 0.0051
VAL 63 0.0062
THR 64 0.0075
ASN 65 0.0090
VAL 66 0.0105
GLY 67 0.0114
GLY 68 0.0103
ALA 69 0.0088
VAL 70 0.0078
VAL 71 0.0066
THR 72 0.0058
GLY 73 0.0048
VAL 74 0.0035
THR 75 0.0038
ALA 76 0.0040
VAL 77 0.0040
ALA 78 0.0047
GLN 79 0.0043
LYS 80 0.0052
THR 81 0.0048
VAL 82 0.0056
GLU 83 0.0048
GLY 84 0.0035
ALA 85 0.0037
GLY 86 0.0040
SER 87 0.0051
ILE 88 0.0051
ALA 89 0.0073
ALA 90 0.0083
ALA 91 0.0095
THR 92 0.0111
GLY 93 0.0117
PHE 94 0.0143
VAL 95 0.0163
LYS 96 0.0191
LYS 97 0.0265
ASP 98 0.0361
GLN 99 0.0459
VAL 37 0.0357
LEU 38 0.0314
TYR 39 0.0263
VAL 40 0.0220
GLY 41 0.0177
SER 42 0.0208
LYS 43 0.0178
THR 44 0.0132
LYS 45 0.0109
GLU 46 0.0091
GLY 47 0.0071
VAL 48 0.0077
VAL 49 0.0053
HIS 50 0.0048
GLY 51 0.0041
VAL 52 0.0037
ALA 53 0.0024
THR 54 0.0021
VAL 55 0.0021
ALA 56 0.0018
GLU 57 0.0025
LYS 58 0.0023
THR 59 0.0023
LYS 60 0.0029
GLU 61 0.0043
GLN 62 0.0054
VAL 63 0.0064
THR 64 0.0076
ASN 65 0.0092
VAL 66 0.0107
GLY 67 0.0115
GLY 68 0.0106
ALA 69 0.0093
VAL 70 0.0084
VAL 71 0.0073
THR 72 0.0066
GLY 73 0.0057
VAL 74 0.0043
THR 75 0.0046
ALA 76 0.0046
VAL 77 0.0046
ALA 78 0.0051
GLN 79 0.0045
LYS 80 0.0053
THR 81 0.0047
VAL 82 0.0055
GLU 83 0.0046
GLY 84 0.0032
ALA 85 0.0035
GLY 86 0.0041
SER 87 0.0054
ILE 88 0.0056
ALA 89 0.0081
ALA 90 0.0090
ALA 91 0.0102
THR 92 0.0117
GLY 93 0.0121
PHE 94 0.0147
VAL 95 0.0170
LYS 96 0.0199
LYS 97 0.0282
ASP 98 0.0388
GLN 99 0.0498
VAL 37 0.0360
LEU 38 0.0320
TYR 39 0.0266
VAL 40 0.0228
GLY 41 0.0182
SER 42 0.0204
LYS 43 0.0168
THR 44 0.0124
LYS 45 0.0094
GLU 46 0.0077
GLY 47 0.0057
VAL 48 0.0060
VAL 49 0.0047
HIS 50 0.0044
GLY 51 0.0037
VAL 52 0.0032
ALA 53 0.0022
THR 54 0.0019
VAL 55 0.0019
ALA 56 0.0016
GLU 57 0.0017
LYS 58 0.0014
THR 59 0.0014
LYS 60 0.0023
GLU 61 0.0033
GLN 62 0.0047
VAL 63 0.0057
THR 64 0.0071
ASN 65 0.0085
VAL 66 0.0101
GLY 67 0.0108
GLY 68 0.0097
ALA 69 0.0082
VAL 70 0.0071
VAL 71 0.0058
THR 72 0.0049
GLY 73 0.0041
VAL 74 0.0028
THR 75 0.0029
ALA 76 0.0031
VAL 77 0.0029
ALA 78 0.0037
GLN 79 0.0033
LYS 80 0.0043
THR 81 0.0038
VAL 82 0.0049
GLU 83 0.0040
GLY 84 0.0023
ALA 85 0.0015
GLY 86 0.0018
SER 87 0.0033
ILE 88 0.0033
ALA 89 0.0057
ALA 90 0.0069
ALA 91 0.0083
THR 92 0.0099
GLY 93 0.0109
PHE 94 0.0134
VAL 95 0.0151
LYS 96 0.0180
LYS 97 0.0251
ASP 98 0.0353
GLN 99 0.0456
VAL 37 0.0366
LEU 38 0.0330
TYR 39 0.0273
VAL 40 0.0241
GLY 41 0.0189
SER 42 0.0205
LYS 43 0.0163
THR 44 0.0120
LYS 45 0.0087
GLU 46 0.0071
GLY 47 0.0050
VAL 48 0.0051
VAL 49 0.0040
HIS 50 0.0040
GLY 51 0.0035
VAL 52 0.0028
ALA 53 0.0020
THR 54 0.0017
VAL 55 0.0017
ALA 56 0.0014
GLU 57 0.0013
LYS 58 0.0008
THR 59 0.0009
LYS 60 0.0022
GLU 61 0.0029
GLN 62 0.0045
VAL 63 0.0055
THR 64 0.0070
ASN 65 0.0083
VAL 66 0.0099
GLY 67 0.0105
GLY 68 0.0092
ALA 69 0.0076
VAL 70 0.0064
VAL 71 0.0049
THR 72 0.0039
GLY 73 0.0029
VAL 74 0.0017
THR 75 0.0015
ALA 76 0.0020
VAL 77 0.0018
ALA 78 0.0030
GLN 79 0.0032
LYS 80 0.0043
THR 81 0.0041
VAL 82 0.0053
GLU 83 0.0045
GLY 84 0.0032
ALA 85 0.0014
GLY 86 0.0011
SER 87 0.0020
ILE 88 0.0018
ALA 89 0.0040
ALA 90 0.0055
ALA 91 0.0070
THR 92 0.0087
GLY 93 0.0101
PHE 94 0.0123
VAL 95 0.0135
LYS 96 0.0164
LYS 97 0.0223
ASP 98 0.0320
GLN 99 0.0414
VAL 37 0.0374
LEU 38 0.0341
TYR 39 0.0281
VAL 40 0.0254
GLY 41 0.0198
SER 42 0.0208
LYS 43 0.0163
THR 44 0.0122
LYS 45 0.0087
GLU 46 0.0072
GLY 47 0.0053
VAL 48 0.0050
VAL 49 0.0037
HIS 50 0.0038
GLY 51 0.0033
VAL 52 0.0024
ALA 53 0.0019
THR 54 0.0015
VAL 55 0.0015
ALA 56 0.0011
GLU 57 0.0010
LYS 58 0.0005
THR 59 0.0009
LYS 60 0.0023
GLU 61 0.0031
GLN 62 0.0047
VAL 63 0.0056
THR 64 0.0072
ASN 65 0.0085
VAL 66 0.0100
GLY 67 0.0105
GLY 68 0.0091
ALA 69 0.0075
VAL 70 0.0062
VAL 71 0.0046
THR 72 0.0036
GLY 73 0.0023
VAL 74 0.0016
THR 75 0.0012
ALA 76 0.0020
VAL 77 0.0022
ALA 78 0.0033
GLN 79 0.0042
LYS 80 0.0052
THR 81 0.0052
VAL 82 0.0063
GLU 83 0.0057
GLY 84 0.0047
ALA 85 0.0030
GLY 86 0.0025
SER 87 0.0023
ILE 88 0.0020
ALA 89 0.0031
ALA 90 0.0046
ALA 91 0.0063
THR 92 0.0081
GLY 93 0.0097
PHE 94 0.0117
VAL 95 0.0124
LYS 96 0.0151
LYS 97 0.0197
ASP 98 0.0287
GLN 99 0.0371
VAL 37 0.0385
LEU 38 0.0356
TYR 39 0.0293
VAL 40 0.0271
GLY 41 0.0212
SER 42 0.0215
LYS 43 0.0166
THR 44 0.0130
LYS 45 0.0092
GLU 46 0.0079
GLY 47 0.0063
VAL 48 0.0057
VAL 49 0.0039
HIS 50 0.0039
GLY 51 0.0032
VAL 52 0.0023
ALA 53 0.0019
THR 54 0.0014
VAL 55 0.0014
ALA 56 0.0008
GLU 57 0.0012
LYS 58 0.0010
THR 59 0.0015
LYS 60 0.0027
GLU 61 0.0038
GLN 62 0.0053
VAL 63 0.0061
THR 64 0.0077
ASN 65 0.0090
VAL 66 0.0106
GLY 67 0.0110
GLY 68 0.0094
ALA 69 0.0079
VAL 70 0.0065
VAL 71 0.0051
THR 72 0.0042
GLY 73 0.0030
VAL 74 0.0028
THR 75 0.0026
ALA 76 0.0031
VAL 77 0.0037
ALA 78 0.0046
GLN 79 0.0057
LYS 80 0.0067
THR 81 0.0068
VAL 82 0.0078
GLU 83 0.0073
GLY 84 0.0065
ALA 85 0.0048
GLY 86 0.0044
SER 87 0.0037
ILE 88 0.0036
ALA 89 0.0036
ALA 90 0.0046
ALA 91 0.0063
THR 92 0.0080
GLY 93 0.0097
PHE 94 0.0115
VAL 95 0.0118
LYS 96 0.0143
LYS 97 0.0176
ASP 98 0.0258
GLN 99 0.0331
VAL 37 0.0399
LEU 38 0.0374
TYR 39 0.0309
VAL 40 0.0292
GLY 41 0.0230
SER 42 0.0224
LYS 43 0.0174
THR 44 0.0146
LYS 45 0.0102
GLU 46 0.0093
GLY 47 0.0080
VAL 48 0.0072
VAL 49 0.0048
HIS 50 0.0045
GLY 51 0.0034
VAL 52 0.0028
ALA 53 0.0021
THR 54 0.0015
VAL 55 0.0016
ALA 56 0.0011
GLU 57 0.0023
LYS 58 0.0024
THR 59 0.0028
LYS 60 0.0035
GLU 61 0.0052
GLN 62 0.0064
VAL 63 0.0071
THR 64 0.0086
ASN 65 0.0099
VAL 66 0.0115
GLY 67 0.0119
GLY 68 0.0103
ALA 69 0.0087
VAL 70 0.0073
VAL 71 0.0061
THR 72 0.0054
GLY 73 0.0045
VAL 74 0.0044
THR 75 0.0044
ALA 76 0.0047
VAL 77 0.0055
ALA 78 0.0063
GLN 79 0.0076
LYS 80 0.0085
THR 81 0.0088
VAL 82 0.0096
GLU 83 0.0093
GLY 84 0.0086
ALA 85 0.0068
GLY 86 0.0064
SER 87 0.0057
ILE 88 0.0056
ALA 89 0.0051
ALA 90 0.0055
ALA 91 0.0072
THR 92 0.0086
GLY 93 0.0103
PHE 94 0.0119
VAL 95 0.0120
LYS 96 0.0144
LYS 97 0.0163
ASP 98 0.0237
GLN 99 0.0299

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.

Should you encounter any unexpected behaviour, please let us know. elNémo has been relocated. **Some cleaning from time to time** Sorry for the inconvenience.

*** PROTEIN FIBRIL 27-JUN-18 6A6B ***

<R2> analysis for 260913220433158305

--- normal mode 9 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* PROTEIN FIBRIL 27-JUN-18 6A6B *

<R²> analysis for 260913220433158305