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***  PROTEIN FIBRIL 27-JUN-18 6A6B  ***

Normal Mode Analysis for ID 260913220433158305

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.3111
mode 8 1.05 0.2942
mode 9 1.09 0.3122
mode 10 1.09 0.1132
mode 11 1.29 0.4162
mode 12 1.38 0.4808
mode 13 1.60 0.1084
mode 14 1.62 0.0680
mode 15 1.73 0.3085
mode 16 1.80 0.1366
mode 17 1.87 0.2689
mode 18 2.14 0.7087
mode 19 2.37 0.5081
mode 20 2.43 0.5838
mode 21 2.92 0.6586
mode 22 3.02 0.7130
mode 23 3.29 0.4452
mode 24 3.30 0.0563
mode 25 3.30 0.0552
mode 26 3.43 0.2057
mode 27 3.44 0.2168
mode 28 3.59 0.5948
mode 29 3.97 0.4064
mode 30 4.13 0.3947
mode 31 4.16 0.5419
mode 32 4.31 0.5537
mode 33 4.37 0.2879
mode 34 4.41 0.1967
mode 35 4.44 0.2728
mode 36 4.57 0.5045
mode 37 4.69 0.7577
mode 38 4.71 0.5359
mode 39 4.79 0.5321
mode 40 5.02 0.5329
mode 41 5.11 0.6540
mode 42 5.29 0.4386
mode 43 5.41 0.3400
mode 44 5.56 0.4047
mode 45 5.60 0.5487
mode 46 5.67 0.4133
mode 47 5.70 0.4234
mode 48 5.78 0.5417
mode 49 5.89 0.6267
mode 50 5.97 0.4369
mode 51 5.98 0.1358
mode 52 6.04 0.4107
mode 53 6.08 0.1107
mode 54 6.13 0.6220
mode 55 6.19 0.4068
mode 56 6.27 0.1996
mode 57 6.31 0.3431
mode 58 6.36 0.2350
mode 59 6.38 0.0940
mode 60 6.49 0.4091
mode 61 6.66 0.5496
mode 62 6.75 0.5049
mode 63 6.77 0.4850
mode 64 6.83 0.5133
mode 65 6.87 0.5262
mode 66 6.90 0.5228
mode 67 6.97 0.4492
mode 68 7.05 0.3515
mode 69 7.12 0.3079
mode 70 7.15 0.4354
mode 71 7.17 0.4550
mode 72 7.23 0.4450
mode 73 7.26 0.3449
mode 74 7.29 0.4357
mode 75 7.45 0.4101
mode 76 7.51 0.4842
mode 77 7.52 0.5363
mode 78 7.57 0.5739
mode 79 7.68 0.6242
mode 80 7.73 0.2843
mode 81 7.75 0.2774
mode 82 7.88 0.5305
mode 83 8.01 0.3769
mode 84 8.02 0.5073
mode 85 8.06 0.2458
mode 86 8.10 0.2763
mode 87 8.11 0.4121
mode 88 8.17 0.5784
mode 89 8.21 0.4992
mode 90 8.27 0.5867
mode 91 8.29 0.5354
mode 92 8.36 0.5670
mode 93 8.38 0.5466
mode 94 8.42 0.4663
mode 95 8.45 0.5313
mode 96 8.48 0.2516
mode 97 8.50 0.2123
mode 98 8.52 0.4980
mode 99 8.65 0.5301
mode 100 8.65 0.4737
mode 101 8.71 0.2516
mode 102 8.77 0.4839
mode 103 8.77 0.4365
mode 104 8.83 0.4801
mode 105 8.86 0.3555
mode 106 8.96 0.5528

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.