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***  OXIDOREDUCTASE 26-OCT-01 1GOS  ***

Normal Mode Analysis for ID 260915155804780221

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0558
mode 8 1.14 0.0448
mode 9 1.23 0.5294
mode 10 1.32 0.2392
mode 11 1.58 0.2723
mode 12 1.97 0.1340
mode 13 2.07 0.4100
mode 14 2.13 0.2838
mode 15 2.31 0.1309
mode 16 2.36 0.0915
mode 17 2.51 0.1000
mode 18 2.65 0.4824
mode 19 2.72 0.4866
mode 20 2.87 0.5679
mode 21 2.92 0.5596
mode 22 3.06 0.4574
mode 23 3.15 0.2785
mode 24 3.19 0.5134
mode 25 3.32 0.0394
mode 26 3.34 0.5367
mode 27 3.50 0.4371
mode 28 3.55 0.4283
mode 29 3.66 0.3274
mode 30 3.73 0.3208
mode 31 3.85 0.4132
mode 32 3.87 0.4168
mode 33 3.92 0.4888
mode 34 3.98 0.2943
mode 35 4.01 0.5276
mode 36 4.09 0.4002
mode 37 4.13 0.2878
mode 38 4.17 0.2940
mode 39 4.31 0.3561
mode 40 4.37 0.1034
mode 41 4.47 0.3020
mode 42 4.51 0.3912
mode 43 4.54 0.5902
mode 44 4.58 0.5476
mode 45 4.64 0.1612
mode 46 4.73 0.5593
mode 47 4.77 0.4294
mode 48 4.84 0.4784
mode 49 4.88 0.4198
mode 50 4.93 0.4434
mode 51 4.97 0.4531
mode 52 5.02 0.5628
mode 53 5.16 0.3431
mode 54 5.16 0.4818
mode 55 5.22 0.4594
mode 56 5.25 0.5331
mode 57 5.26 0.5132
mode 58 5.31 0.4869
mode 59 5.32 0.5426
mode 60 5.43 0.4960
mode 61 5.50 0.4759
mode 62 5.54 0.3107
mode 63 5.61 0.4336
mode 64 5.64 0.4527
mode 65 5.65 0.4307
mode 66 5.75 0.4213
mode 67 5.77 0.4683
mode 68 5.78 0.4800
mode 69 5.85 0.5218
mode 70 5.90 0.4960
mode 71 5.92 0.4608
mode 72 5.96 0.5270
mode 73 6.01 0.5466
mode 74 6.04 0.5081
mode 75 6.10 0.3943
mode 76 6.12 0.4849
mode 77 6.15 0.3617
mode 78 6.26 0.2367
mode 79 6.27 0.3953
mode 80 6.28 0.5351
mode 81 6.32 0.1988
mode 82 6.35 0.4999
mode 83 6.38 0.4333
mode 84 6.41 0.4056
mode 85 6.53 0.4581
mode 86 6.56 0.4549
mode 87 6.59 0.5186
mode 88 6.65 0.4120
mode 89 6.65 0.3951
mode 90 6.68 0.5199
mode 91 6.72 0.5606
mode 92 6.80 0.5961
mode 93 6.81 0.5277
mode 94 6.84 0.4552
mode 95 6.85 0.4151
mode 96 6.89 0.4971
mode 97 6.92 0.2067
mode 98 6.95 0.4471
mode 99 7.03 0.4793
mode 100 7.05 0.4390
mode 101 7.09 0.4575
mode 102 7.11 0.4304
mode 103 7.11 0.4259
mode 104 7.14 0.5697
mode 105 7.21 0.3968
mode 106 7.23 0.4436

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.