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***  MDH2  ***

Normal Mode Analysis for ID 260915171707797285

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7363
mode 8 1.13 0.7465
mode 9 1.79 0.6425
mode 10 1.80 0.8377
mode 11 2.03 0.6106
mode 12 2.14 0.5919
mode 13 2.37 0.7262
mode 14 2.44 0.7426
mode 15 2.52 0.7272
mode 16 2.60 0.7243
mode 17 2.75 0.6272
mode 18 2.79 0.6009
mode 19 3.49 0.8356
mode 20 3.61 0.5569
mode 21 3.84 0.3539
mode 22 3.93 0.3771
mode 23 4.02 0.7631
mode 24 4.10 0.4577
mode 25 4.19 0.4086
mode 26 4.45 0.7899
mode 27 4.74 0.5654
mode 28 4.84 0.5735
mode 29 5.11 0.5428
mode 30 5.22 0.6317
mode 31 5.27 0.6954
mode 32 5.30 0.5334
mode 33 5.50 0.3888
mode 34 5.51 0.4617
mode 35 5.64 0.5078
mode 36 5.66 0.4945
mode 37 6.18 0.4967
mode 38 6.29 0.5275
mode 39 6.29 0.5063
mode 40 6.31 0.6207
mode 41 6.42 0.5504
mode 42 6.53 0.4653
mode 43 6.62 0.5243
mode 44 6.68 0.4196
mode 45 6.74 0.5601
mode 46 6.76 0.5199
mode 47 6.97 0.5269
mode 48 7.01 0.5967
mode 49 7.05 0.5052
mode 50 7.21 0.3969
mode 51 7.26 0.3803
mode 52 7.27 0.5560
mode 53 7.49 0.5793
mode 54 7.50 0.4883
mode 55 7.53 0.5943
mode 56 7.59 0.5497
mode 57 7.62 0.3490
mode 58 7.65 0.5727
mode 59 7.71 0.7154
mode 60 7.72 0.4129
mode 61 7.82 0.6074
mode 62 7.87 0.6284
mode 63 7.88 0.5013
mode 64 8.00 0.6761
mode 65 8.01 0.6984
mode 66 8.05 0.5516
mode 67 8.13 0.4742
mode 68 8.21 0.5470
mode 69 8.21 0.5076
mode 70 8.25 0.4927
mode 71 8.31 0.5436
mode 72 8.33 0.3625
mode 73 8.37 0.5838
mode 74 8.41 0.5425
mode 75 8.43 0.5199
mode 76 8.48 0.5033
mode 77 8.62 0.4966
mode 78 8.65 0.4724
mode 79 8.69 0.5444
mode 80 8.72 0.3327
mode 81 8.75 0.3992
mode 82 8.79 0.4117
mode 83 8.87 0.4423
mode 84 8.87 0.5073
mode 85 8.93 0.4153
mode 86 8.97 0.5587
mode 87 9.01 0.6104
mode 88 9.08 0.5439
mode 89 9.20 0.4354
mode 90 9.31 0.5971
mode 91 9.32 0.6089
mode 92 9.38 0.4427
mode 93 9.55 0.4214
mode 94 9.58 0.2635
mode 95 9.65 0.4950
mode 96 9.68 0.4909
mode 97 9.72 0.5358
mode 98 9.82 0.3973
mode 99 9.85 0.4016
mode 100 9.88 0.4373
mode 101 9.90 0.4710
mode 102 9.93 0.4042
mode 103 9.96 0.5519
mode 104 9.99 0.5270
mode 105 10.07 0.5758
mode 106 10.08 0.4482

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.