CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0466
ASN 60.0151
ALA 70.0129
LYS 80.0074
VAL 90.0080
ALA 100.0061
VAL 110.0061
LEU 120.0054
GLY 130.0073
ALA 140.0140
SER 150.0164
GLY 160.0157
GLY 170.0175
ILE 180.0108
GLY 190.0119
GLN 200.0112
PRO 210.0102
LEU 220.0071
SER 230.0068
LEU 240.0050
LEU 250.0062
LEU 260.0048
LYS 270.0061
ASN 280.0076
SER 290.0088
PRO 300.0108
LEU 310.0136
VAL 320.0137
SER 330.0116
ARG 340.0105
LEU 350.0095
THR 360.0058
LEU 370.0051
TYR 380.0113
ASP 390.0133
ILE 400.0143
ALA 410.0186
HIS 420.0082
THR 430.0096
PRO 440.0076
GLY 450.0063
VAL 460.0033
ALA 470.0089
ALA 480.0116
ASP 490.0095
LEU 500.0060
SER 510.0085
HIS 520.0092
ILE 530.0065
GLU 540.0048
THR 550.0095
LYS 560.0174
ALA 570.0189
ALA 580.0171
VAL 590.0146
LYS 600.0121
GLY 610.0097
TYR 620.0084
LEU 630.0093
GLY 640.0088
PRO 650.0070
GLU 660.0070
GLN 670.0039
LEU 680.0044
PRO 690.0104
ASP 700.0109
CYS 710.0083
LEU 720.0070
LYS 730.0096
GLY 740.0098
CYS 750.0089
ASP 760.0116
VAL 770.0100
VAL 780.0098
VAL 790.0093
ILE 800.0068
PRO 810.0090
ALA 820.0182
GLY 830.0198
VAL 840.0310
PRO 850.0358
ARG 860.0073
LYS 870.0124
PRO 880.0123
GLY 890.0120
MET 900.0125
THR 910.0087
ARG 920.0075
ASP 930.0103
ASP 940.0181
LEU 950.0200
PHE 960.0167
ASN 970.0319
THR 980.0394
ASN 990.0177
ALA 1000.0218
THR 1010.0280
THR 1010.0281
ILE 1020.0077
VAL 1030.0092
ALA 1040.0242
THR 1050.0227
LEU 1060.0154
THR 1070.0217
ALA 1080.0225
ALA 1090.0191
CYS 1100.0145
ALA 1110.0123
GLN 1120.0154
HIS 1130.0053
CYS 1140.0116
PRO 1150.0172
GLU 1160.0247
ALA 1170.0155
MET 1180.0077
MET 1180.0077
ILE 1190.0080
CYS 1200.0112
VAL 1210.0126
ILE 1220.0121
ALA 1230.0097
ASN 1240.0095
PRO 1250.0086
VAL 1260.0092
ASN 1270.0116
SER 1280.0106
THR 1290.0086
ILE 1300.0096
PRO 1310.0105
ILE 1320.0097
THR 1330.0098
ALA 1340.0118
GLU 1350.0142
VAL 1360.0171
PHE 1370.0122
LYS 1380.0201
LYS 1390.0245
HIS 1400.0237
GLY 1410.0220
VAL 1420.0220
TYR 1430.0182
ASN 1440.0135
PRO 1450.0106
ASN 1460.0042
LYS 1470.0037
ILE 1480.0048
PHE 1490.0103
GLY 1500.0087
VAL 1510.0071
THR 1520.0058
THR 1530.0049
LEU 1540.0021
ASP 1550.0031
ILE 1560.0030
VAL 1570.0026
ARG 1580.0040
ALA 1590.0025
ASN 1600.0021
THR 1610.0024
PHE 1620.0084
VAL 1630.0097
ALA 1640.0147
GLU 1650.0167
LEU 1660.0211
LYS 1670.0249
GLY 1680.0296
LEU 1690.0251
ASP 1700.0251
PRO 1710.0059
ALA 1720.0124
ARG 1730.0273
VAL 1740.0123
ASN 1750.0102
VAL 1760.0096
PRO 1770.0119
VAL 1780.0083
ILE 1790.0067
GLY 1800.0060
GLY 1810.0082
HIS 1820.0132
ALA 1830.0112
GLY 1840.0131
LYS 1850.0171
THR 1860.0152
ILE 1870.0128
ILE 1880.0105
PRO 1890.0117
LEU 1900.0129
ILE 1910.0112
SER 1920.0109
GLN 1930.0087
CYS 1940.0059
THR 1950.0087
PRO 1960.0168
LYS 1970.0155
VAL 1980.0167
ASP 1990.0200
PHE 2000.0181
PRO 2010.0358
GLN 2020.0259
ASP 2030.0292
GLN 2040.0199
LEU 2050.0040
THR 2060.0116
ALA 2070.0160
LEU 2080.0126
THR 2090.0077
GLY 2100.0117
ARG 2110.0081
ILE 2120.0042
GLN 2130.0072
GLU 2140.0179
ALA 2150.0161
GLY 2160.0225
THR 2170.0283
GLU 2180.0245
VAL 2190.0168
VAL 2200.0186
LYS 2210.0223
ALA 2220.0130
LYS 2230.0186
ALA 2240.0218
GLY 2250.0213
ALA 2260.0222
GLY 2270.0176
SER 2280.0195
ALA 2290.0285
THR 2300.0086
LEU 2310.0070
SER 2320.0043
MET 2330.0037
MET 2330.0037
ALA 2340.0037
TYR 2350.0035
ALA 2360.0026
GLY 2370.0044
ALA 2380.0090
ARG 2390.0073
PHE 2400.0089
VAL 2410.0098
PHE 2420.0074
SER 2430.0073
LEU 2440.0114
VAL 2450.0105
ASP 2460.0091
ALA 2470.0070
MET 2480.0118
ASN 2490.0124
GLY 2500.0164
LYS 2510.0056
GLU 2520.0100
GLY 2530.0243
VAL 2540.0088
VAL 2550.0105
GLU 2560.0117
CYS 2570.0130
SER 2580.0079
PHE 2590.0044
VAL 2600.0035
LYS 2610.0040
SER 2620.0123
GLN 2630.0108
GLU 2640.0141
THR 2650.0190
GLU 2660.0290
CYS 2670.0198
THR 2680.0137
TYR 2690.0120
PHE 2700.0112
SER 2710.0117
THR 2720.0097
PRO 2730.0166
LEU 2740.0190
LEU 2750.0155
LEU 2760.0121
GLY 2770.0075
LYS 2780.0030
LYS 2790.0028
GLY 2800.0091
ILE 2810.0120
GLU 2820.0129
LYS 2830.0167
ASN 2840.0180
LEU 2850.0281
GLY 2860.0169
ILE 2870.0064
GLY 2880.0233
LYS 2890.0379
VAL 2900.0251
SER 2910.0219
SER 2920.0148
PHE 2930.0059
GLU 2940.0103
GLU 2950.0125
LYS 2960.0101
MET 2970.0132
ILE 2980.0112
SER 2990.0058
ASP 3000.0216
ALA 3010.0253
ILE 3020.0083
PRO 3030.0101
GLU 3040.0146
LEU 3050.0119
LYS 3060.0031
ALA 3070.0091
SER 3080.0121
ILE 3090.0066
LYS 3100.0068
LYS 3110.0080
GLY 3120.0084
GLU 3130.0063
ASP 3140.0132
PHE 3150.0050
VAL 3160.0117
LYS 3170.0085
THR 3180.0387
LEU 3190.0418
ASN 60.0138
ALA 70.0115
LYS 80.0102
VAL 90.0064
ALA 100.0026
VAL 110.0030
LEU 120.0047
GLY 130.0047
ALA 140.0026
SER 150.0038
GLY 160.0045
GLY 170.0049
ILE 180.0041
GLY 190.0047
GLN 200.0050
PRO 210.0044
LEU 220.0055
SER 230.0057
LEU 240.0076
LEU 250.0079
LEU 260.0074
LYS 270.0067
ASN 280.0083
SER 290.0067
PRO 300.0067
LEU 310.0085
VAL 320.0058
SER 330.0083
ARG 340.0060
LEU 350.0034
THR 360.0031
LEU 370.0050
TYR 380.0056
ASP 390.0031
ILE 400.0054
ALA 410.0101
HIS 420.0197
THR 430.0072
PRO 440.0099
GLY 450.0082
VAL 460.0050
ALA 470.0046
ALA 480.0077
ASP 490.0090
LEU 500.0053
SER 510.0050
HIS 520.0050
ILE 530.0040
GLU 540.0047
THR 550.0045
LYS 560.0071
ALA 570.0091
ALA 580.0106
VAL 590.0068
LYS 600.0047
GLY 610.0049
TYR 620.0102
LEU 630.0094
GLY 640.0076
PRO 650.0064
GLU 660.0103
GLN 670.0095
LEU 680.0077
PRO 690.0139
ASP 700.0107
CYS 710.0077
LEU 720.0083
LYS 730.0101
GLY 740.0099
CYS 750.0081
ASP 760.0102
VAL 770.0071
VAL 780.0012
VAL 790.0037
ILE 800.0057
PRO 810.0082
ALA 820.0151
GLY 830.0139
VAL 840.0119
PRO 850.0134
ARG 860.0101
LYS 870.0113
PRO 880.0088
GLY 890.0063
MET 900.0106
THR 910.0089
ARG 920.0090
ASP 930.0081
ASP 940.0164
LEU 950.0194
PHE 960.0123
ASN 970.0233
THR 980.0251
ASN 990.0159
ALA 1000.0085
THR 1010.0116
ILE 1020.0112
VAL 1030.0091
ALA 1040.0118
THR 1050.0099
LEU 1060.0078
THR 1070.0107
ALA 1080.0102
ALA 1090.0098
CYS 1100.0087
ALA 1110.0086
GLN 1120.0095
HIS 1130.0045
CYS 1140.0104
PRO 1150.0155
GLU 1160.0256
ALA 1170.0154
MET 1180.0059
ILE 1190.0031
CYS 1200.0036
VAL 1210.0062
ILE 1220.0106
ALA 1230.0109
ASN 1240.0124
PRO 1250.0127
VAL 1260.0091
ASN 1270.0091
SER 1280.0074
THR 1290.0074
ILE 1300.0057
PRO 1310.0063
ILE 1320.0053
THR 1330.0052
ALA 1340.0070
GLU 1350.0083
VAL 1360.0101
PHE 1370.0068
LYS 1380.0087
LYS 1390.0122
HIS 1400.0155
GLY 1410.0127
VAL 1420.0131
TYR 1430.0115
ASN 1440.0129
PRO 1450.0132
ASN 1460.0083
LYS 1470.0091
ILE 1480.0057
PHE 1490.0068
GLY 1500.0112
VAL 1510.0094
THR 1520.0077
THR 1530.0066
LEU 1540.0078
ASP 1550.0044
ILE 1560.0042
VAL 1570.0070
ARG 1580.0081
ALA 1590.0099
ASN 1600.0070
THR 1610.0055
PHE 1620.0080
VAL 1630.0148
ALA 1640.0155
GLU 1650.0166
LEU 1660.0133
LYS 1670.0281
GLY 1680.0334
LEU 1690.0306
ASP 1700.0246
PRO 1710.0081
ALA 1720.0255
ARG 1730.0178
VAL 1740.0151
ASN 1750.0128
VAL 1760.0105
PRO 1770.0093
VAL 1780.0055
ILE 1790.0080
GLY 1800.0124
GLY 1810.0153
HIS 1820.0182
ALA 1830.0193
GLY 1840.0228
LYS 1850.0279
THR 1860.0183
ILE 1870.0138
ILE 1880.0111
PRO 1890.0083
LEU 1900.0060
ILE 1910.0048
SER 1920.0032
GLN 1930.0042
CYS 1940.0155
THR 1950.0170
PRO 1960.0190
LYS 1970.0164
VAL 1980.0145
ASP 1990.0153
PHE 2000.0137
PRO 2010.0294
GLN 2020.0156
ASP 2030.0178
GLN 2040.0206
LEU 2050.0107
THR 2060.0066
ALA 2070.0104
LEU 2080.0145
THR 2090.0142
GLY 2100.0273
ARG 2110.0234
ILE 2120.0151
GLN 2130.0172
GLU 2140.0201
ALA 2150.0191
GLY 2160.0186
THR 2170.0196
GLU 2180.0250
VAL 2190.0188
VAL 2200.0153
LYS 2210.0154
ALA 2220.0104
LYS 2230.0126
ALA 2240.0142
GLY 2250.0197
ALA 2260.0200
GLY 2270.0194
SER 2280.0192
ALA 2290.0221
THR 2300.0058
LEU 2310.0062
SER 2320.0065
MET 2330.0069
MET 2330.0069
ALA 2340.0082
TYR 2350.0074
ALA 2360.0070
GLY 2370.0078
ALA 2380.0056
ARG 2390.0058
PHE 2400.0058
VAL 2410.0062
PHE 2420.0036
SER 2430.0064
LEU 2440.0061
VAL 2450.0037
ASP 2460.0022
ALA 2470.0055
MET 2480.0035
ASN 2490.0029
GLY 2500.0066
LYS 2510.0105
GLU 2520.0072
GLY 2530.0132
VAL 2540.0026
VAL 2550.0027
GLU 2560.0048
CYS 2570.0072
SER 2580.0108
PHE 2590.0088
VAL 2600.0051
LYS 2610.0028
SER 2620.0113
GLN 2630.0104
GLU 2640.0049
THR 2650.0070
GLU 2660.0045
CYS 2670.0034
THR 2680.0045
TYR 2690.0038
PHE 2700.0090
SER 2710.0103
THR 2720.0097
PRO 2730.0099
LEU 2740.0044
LEU 2750.0018
LEU 2760.0047
GLY 2770.0082
LYS 2780.0105
LYS 2790.0119
GLY 2800.0086
ILE 2810.0047
GLU 2820.0050
LYS 2830.0106
ASN 2840.0158
LEU 2850.0199
GLY 2860.0239
ILE 2870.0198
GLY 2880.0204
LYS 2890.0183
VAL 2900.0048
SER 2910.0088
SER 2920.0174
PHE 2930.0122
GLU 2940.0054
GLU 2950.0135
LYS 2960.0120
MET 2970.0064
ILE 2980.0060
SER 2990.0112
ASP 3000.0061
ALA 3010.0045
ILE 3020.0069
PRO 3030.0070
GLU 3040.0073
LEU 3050.0089
LYS 3060.0079
ALA 3070.0084
SER 3080.0090
ILE 3090.0082
LYS 3100.0117
LYS 3110.0132
GLY 3120.0122
GLU 3130.0101
ASP 3140.0171
PHE 3150.0133
VAL 3160.0169
LYS 3170.0153
THR 3180.0395
LEU 3190.0466

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.