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***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 13  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0400
ASN 60.0168
ALA 70.0154
LYS 80.0133
VAL 90.0122
ALA 100.0108
VAL 110.0103
LEU 120.0092
GLY 130.0094
ALA 140.0081
SER 150.0082
GLY 160.0085
GLY 170.0087
ILE 180.0099
GLY 190.0075
GLN 200.0062
PRO 210.0075
LEU 220.0081
SER 230.0062
LEU 240.0071
LEU 250.0083
LEU 260.0086
LYS 270.0065
ASN 280.0101
SER 290.0112
PRO 300.0158
LEU 310.0170
VAL 320.0125
SER 330.0105
ARG 340.0097
LEU 350.0083
THR 360.0077
LEU 370.0073
TYR 380.0086
ASP 390.0092
ILE 400.0112
ALA 410.0107
HIS 420.0098
THR 430.0076
PRO 440.0078
GLY 450.0096
VAL 460.0082
ALA 470.0064
ALA 480.0077
ASP 490.0085
LEU 500.0081
SER 510.0072
HIS 520.0092
ILE 530.0081
GLU 540.0066
THR 550.0047
LYS 560.0023
ALA 570.0023
ALA 580.0053
VAL 590.0056
LYS 600.0072
GLY 610.0082
TYR 620.0098
LEU 630.0106
GLY 640.0122
PRO 650.0131
GLU 660.0148
GLN 670.0133
LEU 680.0125
PRO 690.0136
ASP 700.0132
CYS 710.0122
LEU 720.0128
LYS 730.0144
GLY 740.0148
CYS 750.0146
ASP 760.0165
VAL 770.0161
VAL 780.0144
VAL 790.0136
ILE 800.0118
PRO 810.0114
ALA 820.0184
GLY 830.0170
VAL 840.0165
PRO 850.0142
ARG 860.0167
LYS 870.0189
PRO 880.0185
GLY 890.0168
MET 900.0133
THR 910.0099
ARG 920.0111
ASP 930.0090
ASP 940.0107
LEU 950.0141
PHE 960.0140
ASN 970.0162
THR 980.0170
ASN 990.0172
ALA 1000.0174
THR 1010.0206
THR 1010.0206
ILE 1020.0184
VAL 1030.0178
ALA 1040.0186
THR 1050.0202
LEU 1060.0160
THR 1070.0165
ALA 1080.0163
ALA 1090.0164
CYS 1100.0167
ALA 1110.0167
GLN 1120.0158
HIS 1130.0157
CYS 1140.0172
PRO 1150.0175
GLU 1160.0191
ALA 1170.0181
MET 1180.0187
MET 1180.0187
ILE 1190.0165
CYS 1200.0159
VAL 1210.0138
ILE 1220.0118
ALA 1230.0136
ASN 1240.0130
PRO 1250.0125
VAL 1260.0131
ASN 1270.0113
SER 1280.0128
THR 1290.0149
ILE 1300.0152
PRO 1310.0154
ILE 1320.0170
THR 1330.0174
ALA 1340.0172
GLU 1350.0176
VAL 1360.0184
PHE 1370.0184
LYS 1380.0185
LYS 1390.0185
HIS 1400.0188
GLY 1410.0189
VAL 1420.0190
TYR 1430.0187
ASN 1440.0189
PRO 1450.0185
ASN 1460.0189
LYS 1470.0189
ILE 1480.0165
PHE 1490.0155
GLY 1500.0112
VAL 1510.0118
THR 1520.0105
THR 1530.0118
LEU 1540.0105
ASP 1550.0098
ILE 1560.0091
VAL 1570.0096
ARG 1580.0100
ALA 1590.0085
ASN 1600.0074
THR 1610.0089
PHE 1620.0112
VAL 1630.0092
ALA 1640.0091
GLU 1650.0123
LEU 1660.0164
LYS 1670.0143
GLY 1680.0131
LEU 1690.0081
ASP 1700.0039
PRO 1710.0050
ALA 1720.0040
ARG 1730.0015
VAL 1740.0032
ASN 1750.0030
VAL 1760.0044
PRO 1770.0048
VAL 1780.0072
ILE 1790.0058
GLY 1800.0058
GLY 1810.0083
HIS 1820.0099
ALA 1830.0104
GLY 1840.0099
LYS 1850.0071
THR 1860.0066
ILE 1870.0080
ILE 1880.0054
PRO 1890.0066
LEU 1900.0046
ILE 1910.0072
SER 1920.0076
GLN 1930.0051
CYS 1940.0049
THR 1950.0059
PRO 1960.0089
LYS 1970.0123
VAL 1980.0139
ASP 1990.0193
PHE 2000.0212
PRO 2010.0262
GLN 2020.0237
ASP 2030.0273
GLN 2040.0247
LEU 2050.0184
THR 2060.0182
ALA 2070.0212
LEU 2080.0165
THR 2090.0130
GLY 2100.0145
ARG 2110.0152
ILE 2120.0124
GLN 2130.0133
GLU 2140.0147
ALA 2150.0145
GLY 2160.0151
THR 2170.0160
GLU 2180.0153
VAL 2190.0147
VAL 2200.0171
LYS 2210.0180
ALA 2220.0157
LYS 2230.0170
ALA 2240.0206
GLY 2250.0225
ALA 2260.0205
GLY 2270.0187
SER 2280.0148
ALA 2290.0104
THR 2300.0095
LEU 2310.0097
SER 2320.0093
MET 2330.0091
MET 2330.0091
ALA 2340.0097
TYR 2350.0106
ALA 2360.0097
GLY 2370.0091
ALA 2380.0147
ARG 2390.0151
PHE 2400.0137
VAL 2410.0147
PHE 2420.0202
SER 2430.0211
LEU 2440.0197
VAL 2450.0213
ASP 2460.0278
ALA 2470.0275
MET 2480.0273
ASN 2490.0309
GLY 2500.0361
LYS 2510.0358
GLU 2520.0367
GLY 2530.0339
VAL 2540.0252
VAL 2550.0208
GLU 2560.0164
CYS 2570.0118
SER 2580.0131
PHE 2590.0121
VAL 2600.0132
LYS 2610.0134
SER 2620.0123
GLN 2630.0119
GLU 2640.0089
THR 2650.0080
GLU 2660.0096
CYS 2670.0095
THR 2680.0124
TYR 2690.0119
PHE 2700.0090
SER 2710.0096
THR 2720.0093
PRO 2730.0112
LEU 2740.0167
LEU 2750.0213
LEU 2760.0227
GLY 2770.0267
LYS 2780.0288
LYS 2790.0264
GLY 2800.0227
ILE 2810.0205
GLU 2820.0241
LYS 2830.0198
ASN 2840.0147
LEU 2850.0137
GLY 2860.0078
ILE 2870.0034
GLY 2880.0032
LYS 2890.0063
VAL 2900.0072
SER 2910.0104
SER 2920.0114
PHE 2930.0102
GLU 2940.0062
GLU 2950.0062
LYS 2960.0064
MET 2970.0043
ILE 2980.0011
SER 2990.0033
ASP 3000.0017
ALA 3010.0024
ILE 3020.0049
PRO 3030.0054
GLU 3040.0058
LEU 3050.0078
LYS 3060.0096
ALA 3070.0096
SER 3080.0107
ILE 3090.0125
LYS 3100.0140
LYS 3110.0143
GLY 3120.0158
GLU 3130.0172
ASP 3140.0185
PHE 3150.0193
VAL 3160.0209
LYS 3170.0220
THR 3180.0241
LEU 3190.0248
ASN 60.0175
ALA 70.0159
LYS 80.0134
VAL 90.0124
ALA 100.0109
VAL 110.0107
LEU 120.0096
GLY 130.0099
ALA 140.0087
SER 150.0088
GLY 160.0093
GLY 170.0094
ILE 180.0105
GLY 190.0083
GLN 200.0068
PRO 210.0080
LEU 220.0088
SER 230.0070
LEU 240.0077
LEU 250.0088
LEU 260.0092
LYS 270.0071
ASN 280.0107
SER 290.0117
PRO 300.0167
LEU 310.0175
VAL 320.0130
SER 330.0109
ARG 340.0098
LEU 350.0086
THR 360.0077
LEU 370.0075
TYR 380.0088
ASP 390.0095
ILE 400.0114
ALA 410.0110
HIS 420.0099
THR 430.0078
PRO 440.0078
GLY 450.0096
VAL 460.0084
ALA 470.0065
ALA 480.0078
ASP 490.0087
LEU 500.0085
SER 510.0073
HIS 520.0094
ILE 530.0082
GLU 540.0064
THR 550.0048
LYS 560.0027
ALA 570.0030
ALA 580.0048
VAL 590.0057
LYS 600.0067
GLY 610.0078
TYR 620.0097
LEU 630.0106
GLY 640.0121
PRO 650.0130
GLU 660.0149
GLN 670.0132
LEU 680.0122
PRO 690.0132
ASP 700.0128
CYS 710.0120
LEU 720.0125
LYS 730.0138
GLY 740.0146
CYS 750.0145
ASP 760.0165
VAL 770.0162
VAL 780.0145
VAL 790.0139
ILE 800.0120
PRO 810.0117
ALA 820.0183
GLY 830.0168
VAL 840.0161
PRO 850.0140
ARG 860.0165
LYS 870.0187
PRO 880.0184
GLY 890.0170
MET 900.0136
THR 910.0102
ARG 920.0111
ASP 930.0091
ASP 940.0109
LEU 950.0139
PHE 960.0134
ASN 970.0153
THR 980.0161
ASN 990.0165
ALA 1000.0163
THR 1010.0191
ILE 1020.0173
VAL 1030.0173
ALA 1040.0178
THR 1050.0192
LEU 1060.0157
THR 1070.0164
ALA 1080.0159
ALA 1090.0160
CYS 1100.0164
ALA 1110.0165
GLN 1120.0156
HIS 1130.0155
CYS 1140.0172
PRO 1150.0173
GLU 1160.0190
ALA 1170.0181
MET 1180.0187
ILE 1190.0165
CYS 1200.0160
VAL 1210.0139
ILE 1220.0120
ALA 1230.0135
ASN 1240.0128
PRO 1250.0122
VAL 1260.0129
ASN 1270.0110
SER 1280.0122
THR 1290.0146
ILE 1300.0150
PRO 1310.0151
ILE 1320.0165
THR 1330.0172
ALA 1340.0172
GLU 1350.0174
VAL 1360.0180
PHE 1370.0184
LYS 1380.0185
LYS 1390.0184
HIS 1400.0187
GLY 1410.0188
VAL 1420.0191
TYR 1430.0188
ASN 1440.0192
PRO 1450.0189
ASN 1460.0191
LYS 1470.0192
ILE 1480.0167
PHE 1490.0157
GLY 1500.0114
VAL 1510.0120
THR 1520.0107
THR 1530.0120
LEU 1540.0106
ASP 1550.0100
ILE 1560.0094
VAL 1570.0100
ARG 1580.0102
ALA 1590.0089
ASN 1600.0080
THR 1610.0093
PHE 1620.0110
VAL 1630.0092
ALA 1640.0094
GLU 1650.0120
LEU 1660.0151
LYS 1670.0126
GLY 1680.0122
LEU 1690.0077
ASP 1700.0054
PRO 1710.0063
ALA 1720.0056
ARG 1730.0036
VAL 1740.0044
ASN 1750.0043
VAL 1760.0052
PRO 1770.0053
VAL 1780.0075
ILE 1790.0060
GLY 1800.0056
GLY 1810.0079
HIS 1820.0097
ALA 1830.0100
GLY 1840.0095
LYS 1850.0069
THR 1860.0061
ILE 1870.0077
ILE 1880.0053
PRO 1890.0067
LEU 1900.0042
ILE 1910.0066
SER 1920.0064
GLN 1930.0035
CYS 1940.0035
THR 1950.0031
PRO 1960.0060
LYS 1970.0099
VAL 1980.0114
ASP 1990.0169
PHE 2000.0190
PRO 2010.0240
GLN 2020.0219
ASP 2030.0255
GLN 2040.0227
LEU 2050.0169
THR 2060.0169
ALA 2070.0199
LEU 2080.0155
THR 2090.0124
GLY 2100.0137
ARG 2110.0146
ILE 2120.0122
GLN 2130.0127
GLU 2140.0142
ALA 2150.0143
GLY 2160.0148
THR 2170.0155
GLU 2180.0145
VAL 2190.0143
VAL 2200.0166
LYS 2210.0175
ALA 2220.0154
LYS 2230.0167
ALA 2240.0202
GLY 2250.0221
ALA 2260.0202
GLY 2270.0183
SER 2280.0145
ALA 2290.0105
THR 2300.0097
LEU 2310.0099
SER 2320.0095
MET 2330.0093
MET 2330.0093
ALA 2340.0102
TYR 2350.0108
ALA 2360.0101
GLY 2370.0096
ALA 2380.0150
ARG 2390.0153
PHE 2400.0140
VAL 2410.0150
PHE 2420.0204
SER 2430.0212
LEU 2440.0198
VAL 2450.0215
ASP 2460.0283
ALA 2470.0281
MET 2480.0276
ASN 2490.0314
GLY 2500.0380
LYS 2510.0379
GLU 2520.0400
GLY 2530.0370
VAL 2540.0259
VAL 2550.0214
GLU 2560.0170
CYS 2570.0123
SER 2580.0134
PHE 2590.0123
VAL 2600.0135
LYS 2610.0138
SER 2620.0130
GLN 2630.0128
GLU 2640.0099
THR 2650.0086
GLU 2660.0098
CYS 2670.0092
THR 2680.0123
TYR 2690.0119
PHE 2700.0091
SER 2710.0098
THR 2720.0099
PRO 2730.0121
LEU 2740.0174
LEU 2750.0222
LEU 2760.0234
GLY 2770.0277
LYS 2780.0291
LYS 2790.0267
GLY 2800.0231
ILE 2810.0211
GLU 2820.0247
LYS 2830.0206
ASN 2840.0156
LEU 2850.0144
GLY 2860.0089
ILE 2870.0039
GLY 2880.0035
LYS 2890.0054
VAL 2900.0066
SER 2910.0099
SER 2920.0112
PHE 2930.0101
GLU 2940.0060
GLU 2950.0064
LYS 2960.0070
MET 2970.0045
ILE 2980.0012
SER 2990.0039
ASP 3000.0026
ALA 3010.0015
ILE 3020.0042
PRO 3030.0042
GLU 3040.0044
LEU 3050.0069
LYS 3060.0086
ALA 3070.0081
SER 3080.0096
ILE 3090.0118
LYS 3100.0128
LYS 3110.0127
GLY 3120.0148
GLU 3130.0162
ASP 3140.0168
PHE 3150.0176
VAL 3160.0196
LYS 3170.0204
THR 3180.0219
LEU 3190.0229

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.