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***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0466
ASN 60.0217
ALA 70.0185
LYS 80.0137
VAL 90.0114
ALA 100.0070
VAL 110.0079
LEU 120.0067
GLY 130.0093
ALA 140.0069
SER 150.0088
GLY 160.0063
GLY 170.0043
ILE 180.0033
GLY 190.0037
GLN 200.0066
PRO 210.0075
LEU 220.0079
SER 230.0086
LEU 240.0096
LEU 250.0092
LEU 260.0126
LYS 270.0118
ASN 280.0148
SER 290.0156
PRO 300.0203
LEU 310.0201
VAL 320.0167
SER 330.0156
ARG 340.0124
LEU 350.0101
THR 360.0065
LEU 370.0061
TYR 380.0059
ASP 390.0103
ILE 400.0140
ALA 410.0145
HIS 420.0106
THR 430.0079
PRO 440.0070
GLY 450.0093
VAL 460.0075
ALA 470.0075
ALA 480.0083
ASP 490.0083
LEU 500.0098
SER 510.0085
HIS 520.0105
ILE 530.0114
GLU 540.0136
THR 550.0135
LYS 560.0126
ALA 570.0133
ALA 580.0098
VAL 590.0078
LYS 600.0048
GLY 610.0051
TYR 620.0063
LEU 630.0111
GLY 640.0153
PRO 650.0160
GLU 660.0191
GLN 670.0130
LEU 680.0090
PRO 690.0114
ASP 700.0113
CYS 710.0059
LEU 720.0069
LYS 730.0128
GLY 740.0116
CYS 750.0090
ASP 760.0124
VAL 770.0104
VAL 780.0069
VAL 790.0086
ILE 800.0085
PRO 810.0105
ALA 820.0137
GLY 830.0117
VAL 840.0099
PRO 850.0088
ARG 860.0071
LYS 870.0085
PRO 880.0126
GLY 890.0120
MET 900.0047
THR 910.0057
ARG 920.0078
ASP 930.0064
ASP 940.0075
LEU 950.0100
PHE 960.0112
ASN 970.0117
THR 980.0136
ASN 990.0140
ALA 1000.0140
THR 1010.0152
THR 1010.0152
ILE 1020.0145
VAL 1030.0132
ALA 1040.0125
THR 1050.0128
LEU 1060.0094
THR 1070.0085
ALA 1080.0075
ALA 1090.0060
CYS 1100.0047
ALA 1110.0043
GLN 1120.0060
HIS 1130.0072
CYS 1140.0047
PRO 1150.0051
GLU 1160.0063
ALA 1170.0060
MET 1180.0067
MET 1180.0067
ILE 1190.0061
CYS 1200.0092
VAL 1210.0103
ILE 1220.0070
ALA 1230.0076
ASN 1240.0096
PRO 1250.0106
VAL 1260.0100
ASN 1270.0089
SER 1280.0097
THR 1290.0113
ILE 1300.0119
PRO 1310.0113
ILE 1320.0119
THR 1330.0113
ALA 1340.0102
GLU 1350.0103
VAL 1360.0095
PHE 1370.0073
LYS 1380.0073
LYS 1390.0080
HIS 1400.0062
GLY 1410.0051
VAL 1420.0036
TYR 1430.0047
ASN 1440.0048
PRO 1450.0068
ASN 1460.0054
LYS 1470.0060
ILE 1480.0069
PHE 1490.0090
GLY 1500.0067
VAL 1510.0043
THR 1520.0014
THR 1530.0038
LEU 1540.0117
ASP 1550.0115
ILE 1560.0116
VAL 1570.0119
ARG 1580.0158
ALA 1590.0160
ASN 1600.0155
THR 1610.0142
PHE 1620.0129
VAL 1630.0116
ALA 1640.0117
GLU 1650.0096
LEU 1660.0095
LYS 1670.0086
GLY 1680.0098
LEU 1690.0154
ASP 1700.0180
PRO 1710.0178
ALA 1720.0240
ARG 1730.0217
VAL 1740.0152
ASN 1750.0158
VAL 1760.0138
PRO 1770.0169
VAL 1780.0110
ILE 1790.0079
GLY 1800.0050
GLY 1810.0051
HIS 1820.0085
ALA 1830.0073
GLY 1840.0091
LYS 1850.0104
THR 1860.0086
ILE 1870.0116
ILE 1880.0119
PRO 1890.0149
LEU 1900.0126
ILE 1910.0098
SER 1920.0088
GLN 1930.0104
CYS 1940.0104
THR 1950.0181
PRO 1960.0188
LYS 1970.0147
VAL 1980.0135
ASP 1990.0207
PHE 2000.0222
PRO 2010.0332
GLN 2020.0268
ASP 2030.0349
GLN 2040.0287
LEU 2050.0172
THR 2060.0182
ALA 2070.0237
LEU 2080.0168
THR 2090.0181
GLY 2100.0162
ARG 2110.0165
ILE 2120.0168
GLN 2130.0185
GLU 2140.0178
ALA 2150.0179
GLY 2160.0177
THR 2170.0176
GLU 2180.0187
VAL 2190.0158
VAL 2200.0152
LYS 2210.0169
ALA 2220.0175
LYS 2230.0154
ALA 2240.0165
GLY 2250.0148
ALA 2260.0098
GLY 2270.0107
SER 2280.0114
ALA 2290.0104
THR 2300.0096
LEU 2310.0099
SER 2320.0092
MET 2330.0068
MET 2330.0068
ALA 2340.0090
TYR 2350.0084
ALA 2360.0082
GLY 2370.0070
ALA 2380.0075
ARG 2390.0039
PHE 2400.0053
VAL 2410.0080
PHE 2420.0130
SER 2430.0132
LEU 2440.0114
VAL 2450.0124
ASP 2460.0214
ALA 2470.0177
MET 2480.0178
ASN 2490.0233
GLY 2500.0261
LYS 2510.0268
GLU 2520.0230
GLY 2530.0202
VAL 2540.0104
VAL 2550.0099
GLU 2560.0093
CYS 2570.0115
SER 2580.0100
PHE 2590.0099
VAL 2600.0113
LYS 2610.0125
SER 2620.0161
GLN 2630.0174
GLU 2640.0153
THR 2650.0130
GLU 2660.0147
CYS 2670.0129
THR 2680.0141
TYR 2690.0122
PHE 2700.0100
SER 2710.0098
THR 2720.0115
PRO 2730.0129
LEU 2740.0103
LEU 2750.0081
LEU 2760.0069
GLY 2770.0092
LYS 2780.0164
LYS 2790.0134
GLY 2800.0093
ILE 2810.0067
GLU 2820.0083
LYS 2830.0111
ASN 2840.0145
LEU 2850.0180
GLY 2860.0160
ILE 2870.0102
GLY 2880.0118
LYS 2890.0132
VAL 2900.0131
SER 2910.0157
SER 2920.0158
PHE 2930.0157
GLU 2940.0129
GLU 2950.0109
LYS 2960.0117
MET 2970.0111
ILE 2980.0066
SER 2990.0057
ASP 3000.0076
ALA 3010.0048
ILE 3020.0047
PRO 3030.0083
GLU 3040.0058
LEU 3050.0058
LYS 3060.0107
ALA 3070.0102
SER 3080.0098
ILE 3090.0120
LYS 3100.0117
LYS 3110.0120
GLY 3120.0126
GLU 3130.0128
ASP 3140.0136
PHE 3150.0151
VAL 3160.0138
LYS 3170.0136
THR 3180.0182
LEU 3190.0174
ASN 60.0383
ALA 70.0329
LYS 80.0273
VAL 90.0232
ALA 100.0164
VAL 110.0147
LEU 120.0093
GLY 130.0120
ALA 140.0129
SER 150.0159
GLY 160.0130
GLY 170.0117
ILE 180.0093
GLY 190.0103
GLN 200.0133
PRO 210.0133
LEU 220.0132
SER 230.0145
LEU 240.0156
LEU 250.0146
LEU 260.0205
LYS 270.0192
ASN 280.0244
SER 290.0267
PRO 300.0353
LEU 310.0330
VAL 320.0294
SER 330.0301
ARG 340.0259
LEU 350.0214
THR 360.0151
LEU 370.0118
TYR 380.0071
ASP 390.0117
ILE 400.0172
ALA 410.0208
HIS 420.0175
THR 430.0141
PRO 440.0140
GLY 450.0181
VAL 460.0150
ALA 470.0153
ALA 480.0159
ASP 490.0155
LEU 500.0150
SER 510.0138
HIS 520.0150
ILE 530.0160
GLU 540.0177
THR 550.0187
LYS 560.0181
ALA 570.0193
ALA 580.0187
VAL 590.0160
LYS 600.0122
GLY 610.0103
TYR 620.0058
LEU 630.0126
GLY 640.0196
PRO 650.0223
GLU 660.0288
GLN 670.0176
LEU 680.0135
PRO 690.0249
ASP 700.0214
CYS 710.0146
LEU 720.0184
LYS 730.0281
GLY 740.0266
CYS 750.0226
ASP 760.0273
VAL 770.0223
VAL 780.0152
VAL 790.0155
ILE 800.0119
PRO 810.0150
ALA 820.0145
GLY 830.0143
VAL 840.0152
PRO 850.0146
ARG 860.0062
LYS 870.0025
PRO 880.0025
GLY 890.0041
MET 900.0039
THR 910.0036
ARG 920.0071
ASP 930.0084
ASP 940.0107
LEU 950.0129
PHE 960.0124
ASN 970.0157
THR 980.0176
ASN 990.0153
ALA 1000.0137
THR 1010.0162
ILE 1020.0139
VAL 1030.0106
ALA 1040.0087
THR 1050.0096
LEU 1060.0047
THR 1070.0062
ALA 1080.0067
ALA 1090.0089
CYS 1100.0112
ALA 1110.0136
GLN 1120.0188
HIS 1130.0216
CYS 1140.0170
PRO 1150.0187
GLU 1160.0218
ALA 1170.0195
MET 1180.0153
ILE 1190.0121
CYS 1200.0134
VAL 1210.0115
ILE 1220.0108
ALA 1230.0094
ASN 1240.0102
PRO 1250.0097
VAL 1260.0071
ASN 1270.0062
SER 1280.0074
THR 1290.0085
ILE 1300.0087
PRO 1310.0069
ILE 1320.0073
THR 1330.0071
ALA 1340.0065
GLU 1350.0048
VAL 1360.0049
PHE 1370.0070
LYS 1380.0078
LYS 1390.0081
HIS 1400.0103
GLY 1410.0118
VAL 1420.0084
TYR 1430.0067
ASN 1440.0093
PRO 1450.0091
ASN 1460.0087
LYS 1470.0098
ILE 1480.0092
PHE 1490.0090
GLY 1500.0068
VAL 1510.0034
THR 1520.0039
THR 1530.0059
LEU 1540.0112
ASP 1550.0117
ILE 1560.0122
VAL 1570.0119
ARG 1580.0144
ALA 1590.0147
ASN 1600.0145
THR 1610.0141
PHE 1620.0135
VAL 1630.0111
ALA 1640.0121
GLU 1650.0123
LEU 1660.0079
LYS 1670.0044
GLY 1680.0112
LEU 1690.0163
ASP 1700.0153
PRO 1710.0156
ALA 1720.0190
ARG 1730.0166
VAL 1740.0149
ASN 1750.0157
VAL 1760.0150
PRO 1770.0181
VAL 1780.0139
ILE 1790.0097
GLY 1800.0060
GLY 1810.0055
HIS 1820.0081
ALA 1830.0076
GLY 1840.0089
LYS 1850.0099
THR 1860.0087
ILE 1870.0120
ILE 1880.0131
PRO 1890.0173
LEU 1900.0156
ILE 1910.0126
SER 1920.0118
GLN 1930.0114
CYS 1940.0077
THR 1950.0138
PRO 1960.0145
LYS 1970.0121
VAL 1980.0153
ASP 1990.0227
PHE 2000.0240
PRO 2010.0367
GLN 2020.0355
ASP 2030.0447
GLN 2040.0338
LEU 2050.0232
THR 2060.0273
ALA 2070.0307
LEU 2080.0205
THR 2090.0231
GLY 2100.0181
ARG 2110.0187
ILE 2120.0178
GLN 2130.0190
GLU 2140.0138
ALA 2150.0152
GLY 2160.0138
THR 2170.0130
GLU 2180.0119
VAL 2190.0099
VAL 2200.0074
LYS 2210.0086
ALA 2220.0077
LYS 2230.0065
ALA 2240.0066
GLY 2250.0057
ALA 2260.0053
GLY 2270.0060
SER 2280.0062
ALA 2290.0043
THR 2300.0056
LEU 2310.0051
SER 2320.0054
MET 2330.0042
MET 2330.0042
ALA 2340.0072
TYR 2350.0066
ALA 2360.0072
GLY 2370.0063
ALA 2380.0115
ARG 2390.0083
PHE 2400.0070
VAL 2410.0090
PHE 2420.0163
SER 2430.0128
LEU 2440.0131
VAL 2450.0161
ASP 2460.0136
ALA 2470.0061
MET 2480.0167
ASN 2490.0180
GLY 2500.0200
LYS 2510.0137
GLU 2520.0357
GLY 2530.0466
VAL 2540.0141
VAL 2550.0142
GLU 2560.0093
CYS 2570.0082
SER 2580.0038
PHE 2590.0042
VAL 2600.0072
LYS 2610.0101
SER 2620.0143
GLN 2630.0171
GLU 2640.0124
THR 2650.0093
GLU 2660.0156
CYS 2670.0127
THR 2680.0130
TYR 2690.0090
PHE 2700.0057
SER 2710.0055
THR 2720.0114
PRO 2730.0175
LEU 2740.0145
LEU 2750.0180
LEU 2760.0095
GLY 2770.0145
LYS 2780.0199
LYS 2790.0234
GLY 2800.0153
ILE 2810.0117
GLU 2820.0230
LYS 2830.0266
ASN 2840.0239
LEU 2850.0290
GLY 2860.0182
ILE 2870.0145
GLY 2880.0172
LYS 2890.0176
VAL 2900.0154
SER 2910.0173
SER 2920.0156
PHE 2930.0169
GLU 2940.0147
GLU 2950.0112
LYS 2960.0116
MET 2970.0117
ILE 2980.0071
SER 2990.0087
ASP 3000.0136
ALA 3010.0097
ILE 3020.0116
PRO 3030.0165
GLU 3040.0138
LEU 3050.0101
LYS 3060.0140
ALA 3070.0130
SER 3080.0099
ILE 3090.0108
LYS 3100.0096
LYS 3110.0094
GLY 3120.0094
GLU 3130.0101
ASP 3140.0135
PHE 3150.0148
VAL 3160.0141
LYS 3170.0185
THR 3180.0264
LEU 3190.0243

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.