CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 33  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0354
ASN 60.0228
ALA 70.0171
LYS 80.0135
VAL 90.0117
ALA 100.0094
VAL 110.0105
LEU 120.0099
GLY 130.0132
ALA 140.0167
SER 150.0201
GLY 160.0166
GLY 170.0148
ILE 180.0107
GLY 190.0118
GLN 200.0158
PRO 210.0156
LEU 220.0129
SER 230.0132
LEU 240.0153
LEU 250.0146
LEU 260.0146
LYS 270.0135
ASN 280.0181
SER 290.0182
PRO 300.0235
LEU 310.0198
VAL 320.0183
SER 330.0192
ARG 340.0165
LEU 350.0163
THR 360.0134
LEU 370.0161
TYR 380.0183
ASP 390.0213
ILE 400.0242
ALA 410.0280
HIS 420.0232
THR 430.0227
PRO 440.0205
GLY 450.0215
VAL 460.0142
ALA 470.0153
ALA 480.0135
ASP 490.0127
LEU 500.0093
SER 510.0063
HIS 520.0055
ILE 530.0076
GLU 540.0058
THR 550.0081
LYS 560.0103
ALA 570.0140
ALA 580.0179
VAL 590.0178
LYS 600.0163
GLY 610.0169
TYR 620.0220
LEU 630.0248
GLY 640.0239
PRO 650.0201
GLU 660.0212
GLN 670.0192
LEU 680.0138
PRO 690.0087
ASP 700.0105
CYS 710.0127
LEU 720.0095
LYS 730.0115
GLY 740.0138
CYS 750.0101
ASP 760.0108
VAL 770.0058
VAL 780.0046
VAL 790.0038
ILE 800.0029
PRO 810.0034
ALA 820.0081
GLY 830.0067
VAL 840.0073
PRO 850.0096
ARG 860.0136
LYS 870.0157
PRO 880.0174
GLY 890.0155
MET 900.0176
THR 910.0180
ARG 920.0164
ASP 930.0169
ASP 940.0190
LEU 950.0157
PHE 960.0134
ASN 970.0135
THR 980.0122
ASN 990.0101
ALA 1000.0087
THR 1010.0079
THR 1010.0079
ILE 1020.0046
VAL 1030.0048
ALA 1040.0035
THR 1050.0021
LEU 1060.0031
THR 1070.0050
ALA 1080.0046
ALA 1090.0047
CYS 1100.0081
ALA 1110.0080
GLN 1120.0078
HIS 1130.0081
CYS 1140.0101
PRO 1150.0109
GLU 1160.0124
ALA 1170.0100
MET 1180.0073
MET 1180.0073
ILE 1190.0060
CYS 1200.0054
VAL 1210.0057
ILE 1220.0097
ALA 1230.0089
ASN 1240.0114
PRO 1250.0125
VAL 1260.0112
ASN 1270.0099
SER 1280.0087
THR 1290.0088
ILE 1300.0070
PRO 1310.0050
ILE 1320.0052
THR 1330.0048
ALA 1340.0067
GLU 1350.0067
VAL 1360.0070
PHE 1370.0075
LYS 1380.0106
LYS 1390.0112
HIS 1400.0120
GLY 1410.0135
VAL 1420.0123
TYR 1430.0108
ASN 1440.0111
PRO 1450.0105
ASN 1460.0123
LYS 1470.0082
ILE 1480.0068
PHE 1490.0073
GLY 1500.0111
VAL 1510.0097
THR 1520.0116
THR 1530.0094
LEU 1540.0096
ASP 1550.0096
ILE 1560.0092
VAL 1570.0079
ARG 1580.0072
ALA 1590.0059
ASN 1600.0068
THR 1610.0062
PHE 1620.0060
VAL 1630.0065
ALA 1640.0095
GLU 1650.0064
LEU 1660.0070
LYS 1670.0088
GLY 1680.0093
LEU 1690.0105
ASP 1700.0101
PRO 1710.0057
ALA 1720.0105
ARG 1730.0161
VAL 1740.0130
ASN 1750.0137
VAL 1760.0127
PRO 1770.0151
VAL 1780.0152
ILE 1790.0130
GLY 1800.0104
GLY 1810.0108
HIS 1820.0120
ALA 1830.0118
GLY 1840.0127
LYS 1850.0119
THR 1860.0097
ILE 1870.0120
ILE 1880.0112
PRO 1890.0135
LEU 1900.0147
ILE 1910.0162
SER 1920.0165
GLN 1930.0182
CYS 1940.0156
THR 1950.0173
PRO 1960.0181
LYS 1970.0169
VAL 1980.0162
ASP 1990.0157
PHE 2000.0134
PRO 2010.0154
GLN 2020.0105
ASP 2030.0059
GLN 2040.0062
LEU 2050.0100
THR 2060.0073
ALA 2070.0078
LEU 2080.0096
THR 2090.0100
GLY 2100.0091
ARG 2110.0097
ILE 2120.0101
GLN 2130.0101
GLU 2140.0127
ALA 2150.0126
GLY 2160.0122
THR 2170.0131
GLU 2180.0174
VAL 2190.0170
VAL 2200.0157
LYS 2210.0194
ALA 2220.0262
LYS 2230.0259
ALA 2240.0309
GLY 2250.0311
ALA 2260.0282
GLY 2270.0194
SER 2280.0118
ALA 2290.0073
THR 2300.0083
LEU 2310.0088
SER 2320.0062
MET 2330.0032
MET 2330.0032
ALA 2340.0060
TYR 2350.0048
ALA 2360.0026
GLY 2370.0043
ALA 2380.0095
ARG 2390.0057
PHE 2400.0053
VAL 2410.0053
PHE 2420.0107
SER 2430.0098
LEU 2440.0071
VAL 2450.0099
ASP 2460.0206
ALA 2470.0130
MET 2480.0161
ASN 2490.0242
GLY 2500.0221
LYS 2510.0241
GLU 2520.0168
GLY 2530.0272
VAL 2540.0185
VAL 2550.0186
GLU 2560.0169
CYS 2570.0160
SER 2580.0156
PHE 2590.0115
VAL 2600.0096
LYS 2610.0095
SER 2620.0172
GLN 2630.0226
GLU 2640.0231
THR 2650.0189
GLU 2660.0188
CYS 2670.0112
THR 2680.0106
TYR 2690.0077
PHE 2700.0103
SER 2710.0143
THR 2720.0194
PRO 2730.0246
LEU 2740.0204
LEU 2750.0188
LEU 2760.0103
GLY 2770.0040
LYS 2780.0131
LYS 2790.0132
GLY 2800.0050
ILE 2810.0092
GLU 2820.0118
LYS 2830.0222
ASN 2840.0249
LEU 2850.0354
GLY 2860.0280
ILE 2870.0217
GLY 2880.0265
LYS 2890.0248
VAL 2900.0166
SER 2910.0136
SER 2920.0115
PHE 2930.0107
GLU 2940.0105
GLU 2950.0139
LYS 2960.0128
MET 2970.0093
ILE 2980.0085
SER 2990.0131
ASP 3000.0121
ALA 3010.0073
ILE 3020.0068
PRO 3030.0108
GLU 3040.0103
LEU 3050.0061
LYS 3060.0063
ALA 3070.0105
SER 3080.0091
ILE 3090.0044
LYS 3100.0052
LYS 3110.0088
GLY 3120.0073
GLU 3130.0052
ASP 3140.0077
PHE 3150.0098
VAL 3160.0076
LYS 3170.0094
THR 3180.0170
LEU 3190.0143
ASN 60.0181
ALA 70.0136
LYS 80.0125
VAL 90.0116
ALA 100.0103
VAL 110.0119
LEU 120.0127
GLY 130.0151
ALA 140.0168
SER 150.0213
GLY 160.0197
GLY 170.0189
ILE 180.0142
GLY 190.0149
GLN 200.0177
PRO 210.0164
LEU 220.0155
SER 230.0155
LEU 240.0167
LEU 250.0161
LEU 260.0169
LYS 270.0148
ASN 280.0183
SER 290.0193
PRO 300.0236
LEU 310.0196
VAL 320.0183
SER 330.0185
ARG 340.0168
LEU 350.0161
THR 360.0142
LEU 370.0152
TYR 380.0168
ASP 390.0210
ILE 400.0217
ALA 410.0218
HIS 420.0206
THR 430.0196
PRO 440.0201
GLY 450.0241
VAL 460.0155
ALA 470.0164
ALA 480.0151
ASP 490.0130
LEU 500.0086
SER 510.0079
HIS 520.0049
ILE 530.0061
GLU 540.0031
THR 550.0056
LYS 560.0102
ALA 570.0140
ALA 580.0173
VAL 590.0169
LYS 600.0170
GLY 610.0164
TYR 620.0130
LEU 630.0149
GLY 640.0227
PRO 650.0312
GLU 660.0297
GLN 670.0171
LEU 680.0196
PRO 690.0181
ASP 700.0130
CYS 710.0116
LEU 720.0126
LYS 730.0132
GLY 740.0148
CYS 750.0097
ASP 760.0105
VAL 770.0071
VAL 780.0097
VAL 790.0092
ILE 800.0083
PRO 810.0084
ALA 820.0102
GLY 830.0082
VAL 840.0119
PRO 850.0166
ARG 860.0174
LYS 870.0146
PRO 880.0139
GLY 890.0139
MET 900.0228
THR 910.0214
ARG 920.0202
ASP 930.0198
ASP 940.0224
LEU 950.0211
PHE 960.0185
ASN 970.0191
THR 980.0167
ASN 990.0159
ALA 1000.0135
THR 1010.0126
ILE 1020.0112
VAL 1030.0120
ALA 1040.0092
THR 1050.0086
LEU 1060.0100
THR 1070.0115
ALA 1080.0105
ALA 1090.0103
CYS 1100.0105
ALA 1110.0132
GLN 1120.0124
HIS 1130.0114
CYS 1140.0103
PRO 1150.0121
GLU 1160.0129
ALA 1170.0111
MET 1180.0117
ILE 1190.0107
CYS 1200.0118
VAL 1210.0118
ILE 1220.0147
ALA 1230.0137
ASN 1240.0140
PRO 1250.0138
VAL 1260.0148
ASN 1270.0123
SER 1280.0115
THR 1290.0126
ILE 1300.0120
PRO 1310.0081
ILE 1320.0085
THR 1330.0097
ALA 1340.0090
GLU 1350.0066
VAL 1360.0054
PHE 1370.0063
LYS 1380.0049
LYS 1390.0023
HIS 1400.0043
GLY 1410.0060
VAL 1420.0068
TYR 1430.0086
ASN 1440.0105
PRO 1450.0129
ASN 1460.0160
LYS 1470.0128
ILE 1480.0130
PHE 1490.0149
GLY 1500.0162
VAL 1510.0127
THR 1520.0140
THR 1530.0097
LEU 1540.0066
ASP 1550.0088
ILE 1560.0077
VAL 1570.0059
ARG 1580.0051
ALA 1590.0056
ASN 1600.0065
THR 1610.0070
PHE 1620.0069
VAL 1630.0072
ALA 1640.0099
GLU 1650.0091
LEU 1660.0043
LYS 1670.0067
GLY 1680.0084
LEU 1690.0110
ASP 1700.0028
PRO 1710.0042
ALA 1720.0065
ARG 1730.0058
VAL 1740.0098
ASN 1750.0118
VAL 1760.0126
PRO 1770.0153
VAL 1780.0165
ILE 1790.0133
GLY 1800.0102
GLY 1810.0108
HIS 1820.0111
ALA 1830.0121
GLY 1840.0141
LYS 1850.0131
THR 1860.0094
ILE 1870.0122
ILE 1880.0107
PRO 1890.0140
LEU 1900.0147
ILE 1910.0149
SER 1920.0150
GLN 1930.0159
CYS 1940.0131
THR 1950.0163
PRO 1960.0166
LYS 1970.0157
VAL 1980.0179
ASP 1990.0177
PHE 2000.0135
PRO 2010.0193
GLN 2020.0142
ASP 2030.0167
GLN 2040.0111
LEU 2050.0035
THR 2060.0055
ALA 2070.0077
LEU 2080.0060
THR 2090.0087
GLY 2100.0072
ARG 2110.0081
ILE 2120.0083
GLN 2130.0083
GLU 2140.0082
ALA 2150.0091
GLY 2160.0125
THR 2170.0127
GLU 2180.0130
VAL 2190.0125
VAL 2200.0122
LYS 2210.0125
ALA 2220.0156
LYS 2230.0141
ALA 2240.0154
GLY 2250.0145
ALA 2260.0146
GLY 2270.0126
SER 2280.0121
ALA 2290.0097
THR 2300.0103
LEU 2310.0105
SER 2320.0089
MET 2330.0083
MET 2330.0083
ALA 2340.0125
TYR 2350.0102
ALA 2360.0082
GLY 2370.0102
ALA 2380.0161
ARG 2390.0104
PHE 2400.0086
VAL 2410.0096
PHE 2420.0130
SER 2430.0094
LEU 2440.0054
VAL 2450.0053
ASP 2460.0140
ALA 2470.0063
MET 2480.0090
ASN 2490.0179
GLY 2500.0314
LYS 2510.0266
GLU 2520.0219
GLY 2530.0091
VAL 2540.0135
VAL 2550.0161
GLU 2560.0167
CYS 2570.0186
SER 2580.0209
PHE 2590.0155
VAL 2600.0150
LYS 2610.0136
SER 2620.0219
GLN 2630.0275
GLU 2640.0235
THR 2650.0181
GLU 2660.0260
CYS 2670.0150
THR 2680.0154
TYR 2690.0094
PHE 2700.0112
SER 2710.0160
THR 2720.0209
PRO 2730.0281
LEU 2740.0231
LEU 2750.0186
LEU 2760.0118
GLY 2770.0078
LYS 2780.0118
LYS 2790.0136
GLY 2800.0088
ILE 2810.0144
GLU 2820.0150
LYS 2830.0233
ASN 2840.0270
LEU 2850.0348
GLY 2860.0273
ILE 2870.0195
GLY 2880.0229
LYS 2890.0178
VAL 2900.0142
SER 2910.0128
SER 2920.0114
PHE 2930.0127
GLU 2940.0104
GLU 2950.0098
LYS 2960.0125
MET 2970.0119
ILE 2980.0096
SER 2990.0205
ASP 3000.0245
ALA 3010.0168
ILE 3020.0194
PRO 3030.0266
GLU 3040.0225
LEU 3050.0136
LYS 3060.0194
ALA 3070.0235
SER 3080.0177
ILE 3090.0122
LYS 3100.0150
LYS 3110.0161
GLY 3120.0128
GLU 3130.0117
ASP 3140.0170
PHE 3150.0144
VAL 3160.0116
LYS 3170.0150
THR 3180.0186
LEU 3190.0131

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.