CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 36  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0366
ASN 60.0223
ALA 70.0171
LYS 80.0129
VAL 90.0077
ALA 100.0093
VAL 110.0086
LEU 120.0085
GLY 130.0074
ALA 140.0073
SER 150.0049
GLY 160.0054
GLY 170.0071
ILE 180.0079
GLY 190.0084
GLN 200.0090
PRO 210.0110
LEU 220.0103
SER 230.0107
LEU 240.0109
LEU 250.0110
LEU 260.0127
LYS 270.0124
ASN 280.0125
SER 290.0126
PRO 300.0161
LEU 310.0150
VAL 320.0150
SER 330.0169
ARG 340.0149
LEU 350.0126
THR 360.0096
LEU 370.0071
TYR 380.0096
ASP 390.0091
ILE 400.0112
ALA 410.0064
HIS 420.0073
THR 430.0069
PRO 440.0075
GLY 450.0127
VAL 460.0125
ALA 470.0132
ALA 480.0138
ASP 490.0142
LEU 500.0123
SER 510.0123
HIS 520.0112
ILE 530.0099
GLU 540.0113
THR 550.0106
LYS 560.0104
ALA 570.0123
ALA 580.0164
VAL 590.0128
LYS 600.0092
GLY 610.0055
TYR 620.0040
LEU 630.0096
GLY 640.0190
PRO 650.0261
GLU 660.0225
GLN 670.0136
LEU 680.0176
PRO 690.0188
ASP 700.0108
CYS 710.0103
LEU 720.0135
LYS 730.0143
GLY 740.0157
CYS 750.0091
ASP 760.0077
VAL 770.0036
VAL 780.0048
VAL 790.0069
ILE 800.0075
PRO 810.0097
ALA 820.0151
GLY 830.0189
VAL 840.0227
PRO 850.0263
ARG 860.0213
LYS 870.0206
PRO 880.0193
GLY 890.0187
MET 900.0172
THR 910.0170
ARG 920.0175
ASP 930.0181
ASP 940.0204
LEU 950.0222
PHE 960.0177
ASN 970.0174
THR 980.0215
ASN 990.0213
ALA 1000.0163
THR 1010.0171
THR 1010.0170
ILE 1020.0195
VAL 1030.0183
ALA 1040.0131
THR 1050.0151
LEU 1060.0165
THR 1070.0149
ALA 1080.0120
ALA 1090.0156
CYS 1100.0137
ALA 1110.0129
GLN 1120.0142
HIS 1130.0155
CYS 1140.0127
PRO 1150.0096
GLU 1160.0091
ALA 1170.0080
MET 1180.0084
MET 1180.0084
ILE 1190.0080
CYS 1200.0084
VAL 1210.0089
ILE 1220.0103
ALA 1230.0125
ASN 1240.0162
PRO 1250.0187
VAL 1260.0174
ASN 1270.0167
SER 1280.0158
THR 1290.0172
ILE 1300.0183
PRO 1310.0174
ILE 1320.0150
THR 1330.0156
ALA 1340.0179
GLU 1350.0149
VAL 1360.0110
PHE 1370.0138
LYS 1380.0165
LYS 1390.0120
HIS 1400.0106
GLY 1410.0163
VAL 1420.0142
TYR 1430.0162
ASN 1440.0144
PRO 1450.0173
ASN 1460.0118
LYS 1470.0130
ILE 1480.0139
PHE 1490.0141
GLY 1500.0093
VAL 1510.0090
THR 1520.0085
THR 1530.0095
LEU 1540.0076
ASP 1550.0078
ILE 1560.0073
VAL 1570.0066
ARG 1580.0084
ALA 1590.0082
ASN 1600.0077
THR 1610.0077
PHE 1620.0082
VAL 1630.0073
ALA 1640.0083
GLU 1650.0086
LEU 1660.0077
LYS 1670.0055
GLY 1680.0084
LEU 1690.0086
ASP 1700.0110
PRO 1710.0107
ALA 1720.0124
ARG 1730.0102
VAL 1740.0105
ASN 1750.0121
VAL 1760.0107
PRO 1770.0127
VAL 1780.0105
ILE 1790.0086
GLY 1800.0103
GLY 1810.0145
HIS 1820.0117
ALA 1830.0081
GLY 1840.0067
LYS 1850.0103
THR 1860.0111
ILE 1870.0106
ILE 1880.0080
PRO 1890.0084
LEU 1900.0099
ILE 1910.0090
SER 1920.0088
GLN 1930.0119
CYS 1940.0112
THR 1950.0130
PRO 1960.0108
LYS 1970.0098
VAL 1980.0075
ASP 1990.0079
PHE 2000.0059
PRO 2010.0113
GLN 2020.0069
ASP 2030.0132
GLN 2040.0119
LEU 2050.0065
THR 2060.0094
ALA 2070.0110
LEU 2080.0083
THR 2090.0101
GLY 2100.0080
ARG 2110.0073
ILE 2120.0070
GLN 2130.0086
GLU 2140.0113
ALA 2150.0116
GLY 2160.0149
THR 2170.0178
GLU 2180.0215
VAL 2190.0188
VAL 2200.0185
LYS 2210.0215
ALA 2220.0188
LYS 2230.0172
ALA 2240.0175
GLY 2250.0165
ALA 2260.0161
GLY 2270.0149
SER 2280.0167
ALA 2290.0172
THR 2300.0122
LEU 2310.0105
SER 2320.0080
MET 2330.0075
MET 2330.0075
ALA 2340.0088
TYR 2350.0055
ALA 2360.0079
GLY 2370.0092
ALA 2380.0111
ARG 2390.0109
PHE 2400.0124
VAL 2410.0130
PHE 2420.0165
SER 2430.0165
LEU 2440.0183
VAL 2450.0194
ASP 2460.0238
ALA 2470.0217
MET 2480.0229
ASN 2490.0257
GLY 2500.0312
LYS 2510.0304
GLU 2520.0295
GLY 2530.0279
VAL 2540.0225
VAL 2550.0184
GLU 2560.0168
CYS 2570.0143
SER 2580.0160
PHE 2590.0170
VAL 2600.0162
LYS 2610.0158
SER 2620.0169
GLN 2630.0144
GLU 2640.0108
THR 2650.0135
GLU 2660.0184
CYS 2670.0197
THR 2680.0209
TYR 2690.0210
PHE 2700.0166
SER 2710.0157
THR 2720.0120
PRO 2730.0135
LEU 2740.0150
LEU 2750.0169
LEU 2760.0193
GLY 2770.0212
LYS 2780.0208
LYS 2790.0163
GLY 2800.0168
ILE 2810.0135
GLU 2820.0158
LYS 2830.0131
ASN 2840.0124
LEU 2850.0123
GLY 2860.0072
ILE 2870.0079
GLY 2880.0083
LYS 2890.0111
VAL 2900.0096
SER 2910.0089
SER 2920.0082
PHE 2930.0077
GLU 2940.0082
GLU 2950.0087
LYS 2960.0091
MET 2970.0087
ILE 2980.0082
SER 2990.0098
ASP 3000.0102
ALA 3010.0126
ILE 3020.0170
PRO 3030.0185
GLU 3040.0190
LEU 3050.0182
LYS 3060.0200
ALA 3070.0181
SER 3080.0187
ILE 3090.0201
LYS 3100.0172
LYS 3110.0106
GLY 3120.0132
GLU 3130.0141
ASP 3140.0115
PHE 3150.0018
VAL 3160.0052
LYS 3170.0144
THR 3180.0178
LEU 3190.0145
ASN 60.0177
ALA 70.0145
LYS 80.0135
VAL 90.0106
ALA 100.0090
VAL 110.0081
LEU 120.0065
GLY 130.0049
ALA 140.0090
SER 150.0075
GLY 160.0065
GLY 170.0072
ILE 180.0078
GLY 190.0094
GLN 200.0106
PRO 210.0117
LEU 220.0108
SER 230.0120
LEU 240.0116
LEU 250.0109
LEU 260.0130
LYS 270.0124
ASN 280.0109
SER 290.0110
PRO 300.0135
LEU 310.0139
VAL 320.0147
SER 330.0159
ARG 340.0163
LEU 350.0145
THR 360.0123
LEU 370.0106
TYR 380.0090
ASP 390.0067
ILE 400.0051
ALA 410.0050
HIS 420.0115
THR 430.0117
PRO 440.0122
GLY 450.0149
VAL 460.0156
ALA 470.0165
ALA 480.0168
ASP 490.0157
LEU 500.0133
SER 510.0135
HIS 520.0115
ILE 530.0088
GLU 540.0102
THR 550.0081
LYS 560.0088
ALA 570.0126
ALA 580.0185
VAL 590.0158
LYS 600.0137
GLY 610.0111
TYR 620.0052
LEU 630.0045
GLY 640.0110
PRO 650.0181
GLU 660.0188
GLN 670.0099
LEU 680.0141
PRO 690.0171
ASP 700.0097
CYS 710.0087
LEU 720.0123
LYS 730.0143
GLY 740.0142
CYS 750.0084
ASP 760.0067
VAL 770.0057
VAL 780.0043
VAL 790.0061
ILE 800.0064
PRO 810.0083
ALA 820.0142
GLY 830.0180
VAL 840.0218
PRO 850.0254
ARG 860.0208
LYS 870.0195
PRO 880.0182
GLY 890.0183
MET 900.0197
THR 910.0201
ARG 920.0197
ASP 930.0206
ASP 940.0230
LEU 950.0240
PHE 960.0189
ASN 970.0187
THR 980.0220
ASN 990.0213
ALA 1000.0166
THR 1010.0179
ILE 1020.0193
VAL 1030.0174
ALA 1040.0135
THR 1050.0167
LEU 1060.0159
THR 1070.0137
ALA 1080.0137
ALA 1090.0174
CYS 1100.0139
ALA 1110.0142
GLN 1120.0174
HIS 1130.0182
CYS 1140.0151
PRO 1150.0107
GLU 1160.0112
ALA 1170.0089
MET 1180.0088
ILE 1190.0082
CYS 1200.0086
VAL 1210.0084
ILE 1220.0107
ALA 1230.0126
ASN 1240.0172
PRO 1250.0200
VAL 1260.0186
ASN 1270.0179
SER 1280.0166
THR 1290.0177
ILE 1300.0191
PRO 1310.0173
ILE 1320.0130
THR 1330.0140
ALA 1340.0161
GLU 1350.0129
VAL 1360.0077
PHE 1370.0109
LYS 1380.0147
LYS 1390.0120
HIS 1400.0086
GLY 1410.0142
VAL 1420.0121
TYR 1430.0156
ASN 1440.0171
PRO 1450.0214
ASN 1460.0154
LYS 1470.0161
ILE 1480.0161
PHE 1490.0154
GLY 1500.0112
VAL 1510.0096
THR 1520.0076
THR 1530.0077
LEU 1540.0043
ASP 1550.0047
ILE 1560.0046
VAL 1570.0047
ARG 1580.0076
ALA 1590.0070
ASN 1600.0074
THR 1610.0073
PHE 1620.0062
VAL 1630.0051
ALA 1640.0082
GLU 1650.0085
LEU 1660.0085
LYS 1670.0075
GLY 1680.0127
LEU 1690.0108
ASP 1700.0150
PRO 1710.0134
ALA 1720.0171
ARG 1730.0140
VAL 1740.0098
ASN 1750.0111
VAL 1760.0091
PRO 1770.0111
VAL 1780.0075
ILE 1790.0068
GLY 1800.0103
GLY 1810.0144
HIS 1820.0124
ALA 1830.0082
GLY 1840.0048
LYS 1850.0077
THR 1860.0100
ILE 1870.0079
ILE 1880.0049
PRO 1890.0049
LEU 1900.0073
ILE 1910.0086
SER 1920.0092
GLN 1930.0108
CYS 1940.0105
THR 1950.0127
PRO 1960.0096
LYS 1970.0102
VAL 1980.0083
ASP 1990.0156
PHE 2000.0127
PRO 2010.0198
GLN 2020.0078
ASP 2030.0028
GLN 2040.0069
LEU 2050.0029
THR 2060.0077
ALA 2070.0076
LEU 2080.0053
THR 2090.0071
GLY 2100.0058
ARG 2110.0052
ILE 2120.0042
GLN 2130.0051
GLU 2140.0098
ALA 2150.0106
GLY 2160.0142
THR 2170.0170
GLU 2180.0209
VAL 2190.0173
VAL 2200.0164
LYS 2210.0208
ALA 2220.0172
LYS 2230.0162
ALA 2240.0170
GLY 2250.0175
ALA 2260.0166
GLY 2270.0139
SER 2280.0148
ALA 2290.0157
THR 2300.0109
LEU 2310.0098
SER 2320.0079
MET 2330.0068
MET 2330.0069
ALA 2340.0083
TYR 2350.0059
ALA 2360.0074
GLY 2370.0084
ALA 2380.0121
ARG 2390.0112
PHE 2400.0128
VAL 2410.0148
PHE 2420.0198
SER 2430.0190
LEU 2440.0209
VAL 2450.0235
ASP 2460.0295
ALA 2470.0250
MET 2480.0261
ASN 2490.0298
GLY 2500.0308
LYS 2510.0366
GLU 2520.0349
GLY 2530.0355
VAL 2540.0237
VAL 2550.0179
GLU 2560.0174
CYS 2570.0141
SER 2580.0175
PHE 2590.0192
VAL 2600.0193
LYS 2610.0198
SER 2620.0215
GLN 2630.0205
GLU 2640.0162
THR 2650.0179
GLU 2660.0214
CYS 2670.0221
THR 2680.0238
TYR 2690.0235
PHE 2700.0192
SER 2710.0169
THR 2720.0119
PRO 2730.0119
LEU 2740.0115
LEU 2750.0134
LEU 2760.0177
GLY 2770.0191
LYS 2780.0179
LYS 2790.0147
GLY 2800.0181
ILE 2810.0130
GLU 2820.0112
LYS 2830.0068
ASN 2840.0080
LEU 2850.0062
GLY 2860.0086
ILE 2870.0066
GLY 2880.0066
LYS 2890.0105
VAL 2900.0114
SER 2910.0152
SER 2920.0152
PHE 2930.0100
GLU 2940.0071
GLU 2950.0102
LYS 2960.0099
MET 2970.0065
ILE 2980.0092
SER 2990.0121
ASP 3000.0113
ALA 3010.0132
ILE 3020.0183
PRO 3030.0187
GLU 3040.0187
LEU 3050.0196
LYS 3060.0205
ALA 3070.0178
SER 3080.0190
ILE 3090.0215
LYS 3100.0173
LYS 3110.0098
GLY 3120.0116
GLU 3130.0129
ASP 3140.0146
PHE 3150.0065
VAL 3160.0085
LYS 3170.0215
THR 3180.0319
LEU 3190.0292

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.