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***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0579
ASN 60.0279
ALA 70.0239
LYS 80.0187
VAL 90.0171
ALA 100.0133
VAL 110.0141
LEU 120.0139
GLY 130.0163
ALA 140.0164
SER 150.0145
GLY 160.0160
GLY 170.0159
ILE 180.0146
GLY 190.0140
GLN 200.0128
PRO 210.0133
LEU 220.0148
SER 230.0132
LEU 240.0133
LEU 250.0152
LEU 260.0170
LYS 270.0152
ASN 280.0193
SER 290.0223
PRO 300.0276
LEU 310.0266
VAL 320.0262
SER 330.0262
ARG 340.0213
LEU 350.0182
THR 360.0136
LEU 370.0131
TYR 380.0142
ASP 390.0164
ILE 400.0188
ALA 410.0216
HIS 420.0184
THR 430.0130
PRO 440.0083
GLY 450.0093
VAL 460.0077
ALA 470.0069
ALA 480.0044
ASP 490.0043
LEU 500.0046
SER 510.0045
HIS 520.0062
ILE 530.0075
GLU 540.0075
THR 550.0120
LYS 560.0168
ALA 570.0189
ALA 580.0203
VAL 590.0149
LYS 600.0127
GLY 610.0096
TYR 620.0122
LEU 630.0142
GLY 640.0140
PRO 650.0122
GLU 660.0176
GLN 670.0172
LEU 680.0166
PRO 690.0193
ASP 700.0181
CYS 710.0172
LEU 720.0172
LYS 730.0182
GLY 740.0108
CYS 750.0106
ASP 760.0090
VAL 770.0097
VAL 780.0078
VAL 790.0076
ILE 800.0079
PRO 810.0094
ALA 820.0093
GLY 830.0100
VAL 840.0135
PRO 850.0172
ARG 860.0218
LYS 870.0207
PRO 880.0155
GLY 890.0138
MET 900.0193
THR 910.0186
ARG 920.0181
ASP 930.0188
ASP 940.0191
LEU 950.0164
PHE 960.0139
ASN 970.0107
THR 980.0090
ASN 990.0087
ALA 1000.0052
THR 1010.0042
THR 1010.0042
ILE 1020.0087
VAL 1030.0064
ALA 1040.0093
THR 1050.0153
LEU 1060.0137
THR 1070.0108
ALA 1080.0159
ALA 1090.0190
CYS 1100.0169
ALA 1110.0162
GLN 1120.0177
HIS 1130.0172
CYS 1140.0121
PRO 1150.0083
GLU 1160.0056
ALA 1170.0054
MET 1180.0056
MET 1180.0056
ILE 1190.0057
CYS 1200.0051
VAL 1210.0053
ILE 1220.0069
ALA 1230.0080
ASN 1240.0095
PRO 1250.0099
VAL 1260.0139
ASN 1270.0141
SER 1280.0122
THR 1290.0117
ILE 1300.0101
PRO 1310.0072
ILE 1320.0047
THR 1330.0061
ALA 1340.0064
GLU 1350.0095
VAL 1360.0108
PHE 1370.0108
LYS 1380.0143
LYS 1390.0208
HIS 1400.0219
GLY 1410.0196
VAL 1420.0129
TYR 1430.0095
ASN 1440.0125
PRO 1450.0149
ASN 1460.0156
LYS 1470.0125
ILE 1480.0118
PHE 1490.0124
GLY 1500.0105
VAL 1510.0072
THR 1520.0063
THR 1530.0052
LEU 1540.0048
ASP 1550.0053
ILE 1560.0059
VAL 1570.0072
ARG 1580.0091
ALA 1590.0101
ASN 1600.0101
THR 1610.0096
PHE 1620.0117
VAL 1630.0126
ALA 1640.0157
GLU 1650.0163
LEU 1660.0165
LYS 1670.0242
GLY 1680.0289
LEU 1690.0268
ASP 1700.0122
PRO 1710.0090
ALA 1720.0112
ARG 1730.0088
VAL 1740.0110
ASN 1750.0085
VAL 1760.0074
PRO 1770.0073
VAL 1780.0023
ILE 1790.0057
GLY 1800.0110
GLY 1810.0134
HIS 1820.0111
ALA 1830.0128
GLY 1840.0127
LYS 1850.0132
THR 1860.0145
ILE 1870.0084
ILE 1880.0069
PRO 1890.0064
LEU 1900.0080
ILE 1910.0082
SER 1920.0118
GLN 1930.0115
CYS 1940.0103
THR 1950.0091
PRO 1960.0129
LYS 1970.0152
VAL 1980.0307
ASP 1990.0360
PHE 2000.0274
PRO 2010.0365
GLN 2020.0373
ASP 2030.0382
GLN 2040.0215
LEU 2050.0163
THR 2060.0198
ALA 2070.0212
LEU 2080.0114
THR 2090.0126
GLY 2100.0093
ARG 2110.0116
ILE 2120.0101
GLN 2130.0085
GLU 2140.0085
ALA 2150.0102
GLY 2160.0114
THR 2170.0110
GLU 2180.0114
VAL 2190.0122
VAL 2200.0153
LYS 2210.0161
ALA 2220.0152
LYS 2230.0167
ALA 2240.0250
GLY 2250.0282
ALA 2260.0210
GLY 2270.0171
SER 2280.0118
ALA 2290.0074
THR 2300.0073
LEU 2310.0070
SER 2320.0077
MET 2330.0090
MET 2330.0090
ALA 2340.0111
TYR 2350.0103
ALA 2360.0094
GLY 2370.0095
ALA 2380.0134
ARG 2390.0114
PHE 2400.0101
VAL 2410.0093
PHE 2420.0180
SER 2430.0161
LEU 2440.0150
VAL 2450.0178
ASP 2460.0259
ALA 2470.0167
MET 2480.0194
ASN 2490.0258
GLY 2500.0159
LYS 2510.0206
GLU 2520.0351
GLY 2530.0579
VAL 2540.0246
VAL 2550.0211
GLU 2560.0186
CYS 2570.0142
SER 2580.0147
PHE 2590.0151
VAL 2600.0160
LYS 2610.0169
SER 2620.0212
GLN 2630.0223
GLU 2640.0211
THR 2650.0222
GLU 2660.0217
CYS 2670.0197
THR 2680.0199
TYR 2690.0182
PHE 2700.0162
SER 2710.0158
THR 2720.0144
PRO 2730.0172
LEU 2740.0200
LEU 2750.0213
LEU 2760.0160
GLY 2770.0133
LYS 2780.0166
LYS 2790.0196
GLY 2800.0140
ILE 2810.0182
GLU 2820.0170
LYS 2830.0205
ASN 2840.0194
LEU 2850.0272
GLY 2860.0135
ILE 2870.0083
GLY 2880.0102
LYS 2890.0215
VAL 2900.0233
SER 2910.0309
SER 2920.0398
PHE 2930.0257
GLU 2940.0203
GLU 2950.0270
LYS 2960.0327
MET 2970.0252
ILE 2980.0199
SER 2990.0269
ASP 3000.0312
ALA 3010.0274
ILE 3020.0214
PRO 3030.0270
GLU 3040.0238
LEU 3050.0226
LYS 3060.0196
ALA 3070.0184
SER 3080.0178
ILE 3090.0194
LYS 3100.0146
LYS 3110.0145
GLY 3120.0095
GLU 3130.0074
ASP 3140.0218
PHE 3150.0147
VAL 3160.0142
LYS 3170.0240
THR 3180.0351
LEU 3190.0317
ASN 60.0057
ALA 70.0065
LYS 80.0062
VAL 90.0074
ALA 100.0092
VAL 110.0099
LEU 120.0099
GLY 130.0111
ALA 140.0109
SER 150.0112
GLY 160.0097
GLY 170.0088
ILE 180.0063
GLY 190.0077
GLN 200.0073
PRO 210.0066
LEU 220.0072
SER 230.0070
LEU 240.0067
LEU 250.0083
LEU 260.0079
LYS 270.0067
ASN 280.0076
SER 290.0089
PRO 300.0076
LEU 310.0081
VAL 320.0073
SER 330.0066
ARG 340.0081
LEU 350.0095
THR 360.0095
LEU 370.0111
TYR 380.0132
ASP 390.0154
ILE 400.0170
ALA 410.0181
HIS 420.0116
THR 430.0121
PRO 440.0081
GLY 450.0072
VAL 460.0058
ALA 470.0074
ALA 480.0050
ASP 490.0060
LEU 500.0040
SER 510.0029
HIS 520.0054
ILE 530.0072
GLU 540.0066
THR 550.0052
LYS 560.0036
ALA 570.0032
ALA 580.0084
VAL 590.0092
LYS 600.0089
GLY 610.0099
TYR 620.0153
LEU 630.0181
GLY 640.0185
PRO 650.0166
GLU 660.0221
GLN 670.0185
LEU 680.0142
PRO 690.0107
ASP 700.0110
CYS 710.0111
LEU 720.0071
LYS 730.0052
GLY 740.0042
CYS 750.0044
ASP 760.0047
VAL 770.0043
VAL 780.0054
VAL 790.0048
ILE 800.0040
PRO 810.0042
ALA 820.0070
GLY 830.0099
VAL 840.0129
PRO 850.0128
ARG 860.0179
LYS 870.0176
PRO 880.0214
GLY 890.0255
MET 900.0185
THR 910.0201
ARG 920.0190
ASP 930.0206
ASP 940.0189
LEU 950.0170
PHE 960.0167
ASN 970.0176
THR 980.0142
ASN 990.0124
ALA 1000.0123
THR 1010.0122
ILE 1020.0069
VAL 1030.0060
ALA 1040.0065
THR 1050.0053
LEU 1060.0061
THR 1070.0053
ALA 1080.0070
ALA 1090.0065
CYS 1100.0067
ALA 1110.0091
GLN 1120.0109
HIS 1130.0075
CYS 1140.0055
PRO 1150.0107
GLU 1160.0111
ALA 1170.0060
MET 1180.0050
ILE 1190.0033
CYS 1200.0028
VAL 1210.0022
ILE 1220.0017
ALA 1230.0047
ASN 1240.0085
PRO 1250.0110
VAL 1260.0043
ASN 1270.0040
SER 1280.0045
THR 1290.0051
ILE 1300.0058
PRO 1310.0061
ILE 1320.0062
THR 1330.0062
ALA 1340.0107
GLU 1350.0114
VAL 1360.0111
PHE 1370.0109
LYS 1380.0156
LYS 1390.0159
HIS 1400.0152
GLY 1410.0157
VAL 1420.0146
TYR 1430.0136
ASN 1440.0123
PRO 1450.0114
ASN 1460.0093
LYS 1470.0073
ILE 1480.0062
PHE 1490.0046
GLY 1500.0023
VAL 1510.0022
THR 1520.0046
THR 1530.0056
LEU 1540.0087
ASP 1550.0079
ILE 1560.0075
VAL 1570.0072
ARG 1580.0086
ALA 1590.0068
ASN 1600.0066
THR 1610.0069
PHE 1620.0075
VAL 1630.0055
ALA 1640.0059
GLU 1650.0058
LEU 1660.0060
LYS 1670.0035
GLY 1680.0031
LEU 1690.0029
ASP 1700.0050
PRO 1710.0039
ALA 1720.0051
ARG 1730.0037
VAL 1740.0076
ASN 1750.0099
VAL 1760.0098
PRO 1770.0125
VAL 1780.0078
ILE 1790.0068
GLY 1800.0055
GLY 1810.0070
HIS 1820.0059
ALA 1830.0067
GLY 1840.0079
LYS 1850.0097
THR 1860.0069
ILE 1870.0094
ILE 1880.0081
PRO 1890.0104
LEU 1900.0121
ILE 1910.0120
SER 1920.0139
GLN 1930.0168
CYS 1940.0124
THR 1950.0115
PRO 1960.0101
LYS 1970.0107
VAL 1980.0098
ASP 1990.0088
PHE 2000.0074
PRO 2010.0067
GLN 2020.0076
ASP 2030.0063
GLN 2040.0075
LEU 2050.0094
THR 2060.0075
ALA 2070.0079
LEU 2080.0088
THR 2090.0098
GLY 2100.0099
ARG 2110.0105
ILE 2120.0118
GLN 2130.0136
GLU 2140.0192
ALA 2150.0176
GLY 2160.0271
THR 2170.0318
GLU 2180.0319
VAL 2190.0191
VAL 2200.0230
LYS 2210.0327
ALA 2220.0230
LYS 2230.0158
ALA 2240.0233
GLY 2250.0168
ALA 2260.0100
GLY 2270.0093
SER 2280.0127
ALA 2290.0085
THR 2300.0023
LEU 2310.0026
SER 2320.0038
MET 2330.0050
MET 2330.0050
ALA 2340.0043
TYR 2350.0055
ALA 2360.0062
GLY 2370.0057
ALA 2380.0068
ARG 2390.0069
PHE 2400.0056
VAL 2410.0046
PHE 2420.0059
SER 2430.0062
LEU 2440.0032
VAL 2450.0039
ASP 2460.0104
ALA 2470.0053
MET 2480.0068
ASN 2490.0123
GLY 2500.0104
LYS 2510.0151
GLU 2520.0145
GLY 2530.0224
VAL 2540.0115
VAL 2550.0114
GLU 2560.0081
CYS 2570.0085
SER 2580.0039
PHE 2590.0044
VAL 2600.0049
LYS 2610.0063
SER 2620.0099
GLN 2630.0114
GLU 2640.0118
THR 2650.0114
GLU 2660.0103
CYS 2670.0086
THR 2680.0074
TYR 2690.0061
PHE 2700.0071
SER 2710.0073
THR 2720.0089
PRO 2730.0103
LEU 2740.0125
LEU 2750.0124
LEU 2760.0059
GLY 2770.0039
LYS 2780.0073
LYS 2790.0104
GLY 2800.0074
ILE 2810.0086
GLU 2820.0130
LYS 2830.0178
ASN 2840.0177
LEU 2850.0217
GLY 2860.0142
ILE 2870.0113
GLY 2880.0131
LYS 2890.0184
VAL 2900.0184
SER 2910.0183
SER 2920.0159
PHE 2930.0124
GLU 2940.0112
GLU 2950.0112
LYS 2960.0080
MET 2970.0058
ILE 2980.0056
SER 2990.0051
ASP 3000.0030
ALA 3010.0019
ILE 3020.0047
PRO 3030.0058
GLU 3040.0048
LEU 3050.0028
LYS 3060.0046
ALA 3070.0039
SER 3080.0052
ILE 3090.0045
LYS 3100.0071
LYS 3110.0083
GLY 3120.0085
GLU 3130.0065
ASP 3140.0109
PHE 3150.0095
VAL 3160.0117
LYS 3170.0134
THR 3180.0170
LEU 3190.0202

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.