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***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0451
ASN 60.0207
ALA 70.0151
LYS 80.0116
VAL 90.0105
ALA 100.0124
VAL 110.0111
LEU 120.0098
GLY 130.0089
ALA 140.0043
SER 150.0054
GLY 160.0047
GLY 170.0045
ILE 180.0021
GLY 190.0040
GLN 200.0062
PRO 210.0063
LEU 220.0054
SER 230.0072
LEU 240.0088
LEU 250.0085
LEU 260.0100
LYS 270.0112
ASN 280.0147
SER 290.0157
PRO 300.0199
LEU 310.0171
VAL 320.0163
SER 330.0181
ARG 340.0089
LEU 350.0079
THR 360.0073
LEU 370.0082
TYR 380.0130
ASP 390.0109
ILE 400.0101
ALA 410.0081
HIS 420.0049
THR 430.0076
PRO 440.0134
GLY 450.0200
VAL 460.0131
ALA 470.0164
ALA 480.0197
ASP 490.0194
LEU 500.0144
SER 510.0161
HIS 520.0165
ILE 530.0176
GLU 540.0143
THR 550.0137
LYS 560.0139
ALA 570.0163
ALA 580.0110
VAL 590.0083
LYS 600.0046
GLY 610.0059
TYR 620.0126
LEU 630.0109
GLY 640.0122
PRO 650.0151
GLU 660.0196
GLN 670.0196
LEU 680.0192
PRO 690.0236
ASP 700.0219
CYS 710.0191
LEU 720.0158
LYS 730.0189
GLY 740.0133
CYS 750.0128
ASP 760.0142
VAL 770.0123
VAL 780.0135
VAL 790.0125
ILE 800.0097
PRO 810.0092
ALA 820.0125
GLY 830.0124
VAL 840.0158
PRO 850.0236
ARG 860.0307
LYS 870.0314
PRO 880.0278
GLY 890.0340
MET 900.0288
THR 910.0291
ARG 920.0248
ASP 930.0278
ASP 940.0256
LEU 950.0227
PHE 960.0191
ASN 970.0180
THR 980.0192
ASN 990.0177
ALA 1000.0154
THR 1010.0148
THR 1010.0148
ILE 1020.0120
VAL 1030.0118
ALA 1040.0050
THR 1050.0059
LEU 1060.0120
THR 1070.0106
ALA 1080.0128
ALA 1090.0189
CYS 1100.0152
ALA 1110.0130
GLN 1120.0182
HIS 1130.0203
CYS 1140.0129
PRO 1150.0060
GLU 1160.0067
ALA 1170.0128
MET 1180.0126
MET 1180.0126
ILE 1190.0105
CYS 1200.0119
VAL 1210.0096
ILE 1220.0154
ALA 1230.0120
ASN 1240.0154
PRO 1250.0187
VAL 1260.0092
ASN 1270.0082
SER 1280.0096
THR 1290.0108
ILE 1300.0058
PRO 1310.0046
ILE 1320.0042
THR 1330.0046
ALA 1340.0041
GLU 1350.0082
VAL 1360.0091
PHE 1370.0099
LYS 1380.0199
LYS 1390.0248
HIS 1400.0260
GLY 1410.0264
VAL 1420.0127
TYR 1430.0083
ASN 1440.0080
PRO 1450.0129
ASN 1460.0127
LYS 1470.0124
ILE 1480.0122
PHE 1490.0134
GLY 1500.0075
VAL 1510.0072
THR 1520.0067
THR 1530.0065
LEU 1540.0032
ASP 1550.0038
ILE 1560.0046
VAL 1570.0042
ARG 1580.0042
ALA 1590.0044
ASN 1600.0047
THR 1610.0051
PHE 1620.0046
VAL 1630.0060
ALA 1640.0074
GLU 1650.0076
LEU 1660.0068
LYS 1670.0091
GLY 1680.0101
LEU 1690.0110
ASP 1700.0152
PRO 1710.0086
ALA 1720.0135
ARG 1730.0164
VAL 1740.0089
ASN 1750.0042
VAL 1760.0047
PRO 1770.0061
VAL 1780.0064
ILE 1790.0064
GLY 1800.0055
GLY 1810.0039
HIS 1820.0094
ALA 1830.0083
GLY 1840.0071
LYS 1850.0065
THR 1860.0039
ILE 1870.0044
ILE 1880.0049
PRO 1890.0052
LEU 1900.0061
ILE 1910.0074
SER 1920.0101
GLN 1930.0093
CYS 1940.0071
THR 1950.0076
PRO 1960.0122
LYS 1970.0146
VAL 1980.0084
ASP 1990.0099
PHE 2000.0147
PRO 2010.0266
GLN 2020.0200
ASP 2030.0165
GLN 2040.0137
LEU 2050.0148
THR 2060.0105
ALA 2070.0095
LEU 2080.0051
THR 2090.0056
GLY 2100.0040
ARG 2110.0042
ILE 2120.0051
GLN 2130.0063
GLU 2140.0109
ALA 2150.0107
GLY 2160.0144
THR 2170.0144
GLU 2180.0129
VAL 2190.0126
VAL 2200.0199
LYS 2210.0197
ALA 2220.0175
LYS 2230.0217
ALA 2240.0324
GLY 2250.0382
ALA 2260.0268
GLY 2270.0225
SER 2280.0159
ALA 2290.0106
THR 2300.0039
LEU 2310.0036
SER 2320.0038
MET 2330.0047
MET 2330.0047
ALA 2340.0055
TYR 2350.0055
ALA 2360.0054
GLY 2370.0060
ALA 2380.0091
ARG 2390.0080
PHE 2400.0086
VAL 2410.0096
PHE 2420.0135
SER 2430.0117
LEU 2440.0121
VAL 2450.0144
ASP 2460.0193
ALA 2470.0133
MET 2480.0169
ASN 2490.0188
GLY 2500.0249
LYS 2510.0313
GLU 2520.0447
GLY 2530.0451
VAL 2540.0104
VAL 2550.0114
GLU 2560.0108
CYS 2570.0143
SER 2580.0107
PHE 2590.0078
VAL 2600.0073
LYS 2610.0083
SER 2620.0138
GLN 2630.0157
GLU 2640.0183
THR 2650.0145
GLU 2660.0065
CYS 2670.0056
THR 2680.0061
TYR 2690.0071
PHE 2700.0093
SER 2710.0110
THR 2720.0125
PRO 2730.0142
LEU 2740.0165
LEU 2750.0153
LEU 2760.0154
GLY 2770.0180
LYS 2780.0165
LYS 2790.0207
GLY 2800.0191
ILE 2810.0179
GLU 2820.0243
LYS 2830.0221
ASN 2840.0210
LEU 2850.0139
GLY 2860.0157
ILE 2870.0146
GLY 2880.0144
LYS 2890.0135
VAL 2900.0105
SER 2910.0111
SER 2920.0101
PHE 2930.0162
GLU 2940.0089
GLU 2950.0096
LYS 2960.0171
MET 2970.0146
ILE 2980.0070
SER 2990.0145
ASP 3000.0159
ALA 3010.0070
ILE 3020.0071
PRO 3030.0077
GLU 3040.0042
LEU 3050.0029
LYS 3060.0026
ALA 3070.0063
SER 3080.0065
ILE 3090.0038
LYS 3100.0052
LYS 3110.0082
GLY 3120.0061
GLU 3130.0036
ASP 3140.0188
PHE 3150.0158
VAL 3160.0068
LYS 3170.0186
THR 3180.0329
LEU 3190.0158
ASN 60.0145
ALA 70.0118
LYS 80.0095
VAL 90.0075
ALA 100.0031
VAL 110.0042
LEU 120.0049
GLY 130.0062
ALA 140.0056
SER 150.0030
GLY 160.0047
GLY 170.0068
ILE 180.0125
GLY 190.0101
GLN 200.0065
PRO 210.0089
LEU 220.0090
SER 230.0064
LEU 240.0049
LEU 250.0055
LEU 260.0032
LYS 270.0014
ASN 280.0040
SER 290.0058
PRO 300.0129
LEU 310.0151
VAL 320.0108
SER 330.0088
ARG 340.0049
LEU 350.0038
THR 360.0031
LEU 370.0023
TYR 380.0043
ASP 390.0050
ILE 400.0065
ALA 410.0059
HIS 420.0106
THR 430.0087
PRO 440.0086
GLY 450.0079
VAL 460.0036
ALA 470.0034
ALA 480.0038
ASP 490.0039
LEU 500.0023
SER 510.0021
HIS 520.0031
ILE 530.0040
GLU 540.0047
THR 550.0040
LYS 560.0033
ALA 570.0028
ALA 580.0035
VAL 590.0037
LYS 600.0047
GLY 610.0056
TYR 620.0058
LEU 630.0059
GLY 640.0068
PRO 650.0075
GLU 660.0059
GLN 670.0062
LEU 680.0051
PRO 690.0048
ASP 700.0053
CYS 710.0059
LEU 720.0047
LYS 730.0048
GLY 740.0081
CYS 750.0070
ASP 760.0085
VAL 770.0070
VAL 780.0039
VAL 790.0062
ILE 800.0097
PRO 810.0124
ALA 820.0120
GLY 830.0082
VAL 840.0051
PRO 850.0046
ARG 860.0099
LYS 870.0218
PRO 880.0341
GLY 890.0380
MET 900.0184
THR 910.0134
ARG 920.0059
ASP 930.0115
ASP 940.0117
LEU 950.0080
PHE 960.0117
ASN 970.0184
THR 980.0106
ASN 990.0108
ALA 1000.0131
THR 1010.0134
ILE 1020.0099
VAL 1030.0108
ALA 1040.0097
THR 1050.0069
LEU 1060.0076
THR 1070.0078
ALA 1080.0064
ALA 1090.0047
CYS 1100.0056
ALA 1110.0060
GLN 1120.0070
HIS 1130.0062
CYS 1140.0044
PRO 1150.0065
GLU 1160.0063
ALA 1170.0068
MET 1180.0050
ILE 1190.0056
CYS 1200.0072
VAL 1210.0133
ILE 1220.0153
ALA 1230.0130
ASN 1240.0103
PRO 1250.0097
VAL 1260.0141
ASN 1270.0138
SER 1280.0149
THR 1290.0163
ILE 1300.0135
PRO 1310.0141
ILE 1320.0129
THR 1330.0128
ALA 1340.0091
GLU 1350.0091
VAL 1360.0082
PHE 1370.0067
LYS 1380.0066
LYS 1390.0095
HIS 1400.0117
GLY 1410.0112
VAL 1420.0063
TYR 1430.0041
ASN 1440.0034
PRO 1450.0027
ASN 1460.0072
LYS 1470.0043
ILE 1480.0047
PHE 1490.0059
GLY 1500.0116
VAL 1510.0118
THR 1520.0113
THR 1530.0123
LEU 1540.0135
ASP 1550.0113
ILE 1560.0108
VAL 1570.0128
ARG 1580.0127
ALA 1590.0110
ASN 1600.0093
THR 1610.0108
PHE 1620.0121
VAL 1630.0122
ALA 1640.0117
GLU 1650.0123
LEU 1660.0157
LYS 1670.0139
GLY 1680.0153
LEU 1690.0142
ASP 1700.0123
PRO 1710.0111
ALA 1720.0067
ARG 1730.0065
VAL 1740.0060
ASN 1750.0068
VAL 1760.0078
PRO 1770.0090
VAL 1780.0091
ILE 1790.0073
GLY 1800.0062
GLY 1810.0075
HIS 1820.0093
ALA 1830.0063
GLY 1840.0052
LYS 1850.0071
THR 1860.0068
ILE 1870.0068
ILE 1880.0074
PRO 1890.0082
LEU 1900.0107
ILE 1910.0107
SER 1920.0092
GLN 1930.0133
CYS 1940.0076
THR 1950.0071
PRO 1960.0064
LYS 1970.0078
VAL 1980.0092
ASP 1990.0125
PHE 2000.0167
PRO 2010.0222
GLN 2020.0172
ASP 2030.0253
GLN 2040.0249
LEU 2050.0191
THR 2060.0164
ALA 2070.0158
LEU 2080.0122
THR 2090.0165
GLY 2100.0048
ARG 2110.0019
ILE 2120.0040
GLN 2130.0049
GLU 2140.0088
ALA 2150.0186
GLY 2160.0147
THR 2170.0187
GLU 2180.0380
VAL 2190.0345
VAL 2200.0234
LYS 2210.0419
ALA 2220.0365
LYS 2230.0303
ALA 2240.0310
GLY 2250.0227
ALA 2260.0229
GLY 2270.0160
SER 2280.0153
ALA 2290.0207
THR 2300.0159
LEU 2310.0166
SER 2320.0172
MET 2330.0169
MET 2330.0169
ALA 2340.0155
TYR 2350.0145
ALA 2360.0154
GLY 2370.0158
ALA 2380.0113
ARG 2390.0077
PHE 2400.0101
VAL 2410.0125
PHE 2420.0152
SER 2430.0137
LEU 2440.0187
VAL 2450.0224
ASP 2460.0271
ALA 2470.0226
MET 2480.0281
ASN 2490.0305
GLY 2500.0145
LYS 2510.0297
GLU 2520.0293
GLY 2530.0294
VAL 2540.0112
VAL 2550.0079
GLU 2560.0096
CYS 2570.0134
SER 2580.0116
PHE 2590.0087
VAL 2600.0072
LYS 2610.0045
SER 2620.0077
GLN 2630.0134
GLU 2640.0193
THR 2650.0182
GLU 2660.0168
CYS 2670.0081
THR 2680.0047
TYR 2690.0061
PHE 2700.0060
SER 2710.0107
THR 2720.0142
PRO 2730.0183
LEU 2740.0144
LEU 2750.0116
LEU 2760.0133
GLY 2770.0138
LYS 2780.0178
LYS 2790.0186
GLY 2800.0168
ILE 2810.0154
GLU 2820.0172
LYS 2830.0182
ASN 2840.0180
LEU 2850.0210
GLY 2860.0230
ILE 2870.0192
GLY 2880.0236
LYS 2890.0228
VAL 2900.0169
SER 2910.0206
SER 2920.0250
PHE 2930.0190
GLU 2940.0155
GLU 2950.0185
LYS 2960.0199
MET 2970.0160
ILE 2980.0135
SER 2990.0187
ASP 3000.0155
ALA 3010.0111
ILE 3020.0099
PRO 3030.0144
GLU 3040.0107
LEU 3050.0083
LYS 3060.0068
ALA 3070.0143
SER 3080.0168
ILE 3090.0160
LYS 3100.0193
LYS 3110.0165
GLY 3120.0163
GLU 3130.0190
ASP 3140.0273
PHE 3150.0206
VAL 3160.0173
LYS 3170.0247
THR 3180.0391
LEU 3190.0311

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.