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***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0568
ASN 60.0166
ALA 70.0143
LYS 80.0121
VAL 90.0095
ALA 100.0068
VAL 110.0069
LEU 120.0064
GLY 130.0074
ALA 140.0066
SER 150.0051
GLY 160.0037
GLY 170.0037
ILE 180.0120
GLY 190.0108
GLN 200.0067
PRO 210.0076
LEU 220.0076
SER 230.0064
LEU 240.0031
LEU 250.0042
LEU 260.0065
LYS 270.0049
ASN 280.0070
SER 290.0107
PRO 300.0143
LEU 310.0182
VAL 320.0148
SER 330.0114
ARG 340.0103
LEU 350.0083
THR 360.0076
LEU 370.0056
TYR 380.0077
ASP 390.0066
ILE 400.0066
ALA 410.0045
HIS 420.0039
THR 430.0041
PRO 440.0040
GLY 450.0044
VAL 460.0038
ALA 470.0039
ALA 480.0034
ASP 490.0037
LEU 500.0035
SER 510.0035
HIS 520.0036
ILE 530.0038
GLU 540.0037
THR 550.0042
LYS 560.0047
ALA 570.0066
ALA 580.0100
VAL 590.0081
LYS 600.0090
GLY 610.0075
TYR 620.0058
LEU 630.0025
GLY 640.0065
PRO 650.0087
GLU 660.0037
GLN 670.0035
LEU 680.0081
PRO 690.0098
ASP 700.0093
CYS 710.0101
LEU 720.0111
LYS 730.0116
GLY 740.0048
CYS 750.0058
ASP 760.0068
VAL 770.0080
VAL 780.0047
VAL 790.0072
ILE 800.0098
PRO 810.0125
ALA 820.0139
GLY 830.0115
VAL 840.0091
PRO 850.0058
ARG 860.0070
LYS 870.0219
PRO 880.0341
GLY 890.0381
MET 900.0147
THR 910.0077
ARG 920.0024
ASP 930.0075
ASP 940.0093
LEU 950.0104
PHE 960.0148
ASN 970.0207
THR 980.0176
ASN 990.0173
ALA 1000.0198
THR 1010.0218
THR 1010.0219
ILE 1020.0159
VAL 1030.0164
ALA 1040.0165
THR 1050.0157
LEU 1060.0131
THR 1070.0136
ALA 1080.0134
ALA 1090.0130
CYS 1100.0121
ALA 1110.0102
GLN 1120.0098
HIS 1130.0109
CYS 1140.0087
PRO 1150.0053
GLU 1160.0054
ALA 1170.0045
MET 1180.0077
MET 1180.0077
ILE 1190.0085
CYS 1200.0078
VAL 1210.0140
ILE 1220.0162
ALA 1230.0141
ASN 1240.0128
PRO 1250.0130
VAL 1260.0146
ASN 1270.0139
SER 1280.0148
THR 1290.0166
ILE 1300.0128
PRO 1310.0137
ILE 1320.0125
THR 1330.0130
ALA 1340.0101
GLU 1350.0101
VAL 1360.0096
PHE 1370.0073
LYS 1380.0065
LYS 1390.0122
HIS 1400.0109
GLY 1410.0094
VAL 1420.0034
TYR 1430.0022
ASN 1440.0020
PRO 1450.0038
ASN 1460.0131
LYS 1470.0098
ILE 1480.0091
PHE 1490.0080
GLY 1500.0133
VAL 1510.0147
THR 1520.0142
THR 1530.0153
LEU 1540.0177
ASP 1550.0162
ILE 1560.0149
VAL 1570.0165
ARG 1580.0182
ALA 1590.0181
ASN 1600.0165
THR 1610.0171
PHE 1620.0212
VAL 1630.0231
ALA 1640.0227
GLU 1650.0216
LEU 1660.0254
LYS 1670.0232
GLY 1680.0264
LEU 1690.0282
ASP 1700.0240
PRO 1710.0223
ALA 1720.0200
ARG 1730.0250
VAL 1740.0156
ASN 1750.0170
VAL 1760.0165
PRO 1770.0194
VAL 1780.0112
ILE 1790.0084
GLY 1800.0064
GLY 1810.0071
HIS 1820.0098
ALA 1830.0092
GLY 1840.0100
LYS 1850.0095
THR 1860.0065
ILE 1870.0079
ILE 1880.0117
PRO 1890.0144
LEU 1900.0187
ILE 1910.0204
SER 1920.0173
GLN 1930.0231
CYS 1940.0161
THR 1950.0157
PRO 1960.0130
LYS 1970.0122
VAL 1980.0142
ASP 1990.0180
PHE 2000.0268
PRO 2010.0364
GLN 2020.0329
ASP 2030.0454
GLN 2040.0417
LEU 2050.0338
THR 2060.0283
ALA 2070.0298
LEU 2080.0254
THR 2090.0303
GLY 2100.0089
ARG 2110.0051
ILE 2120.0098
GLN 2130.0110
GLU 2140.0088
ALA 2150.0226
GLY 2160.0188
THR 2170.0178
GLU 2180.0397
VAL 2190.0361
VAL 2200.0235
LYS 2210.0401
ALA 2220.0397
LYS 2230.0294
ALA 2240.0318
GLY 2250.0225
ALA 2260.0168
GLY 2270.0125
SER 2280.0158
ALA 2290.0226
THR 2300.0175
LEU 2310.0182
SER 2320.0195
MET 2330.0193
MET 2330.0193
ALA 2340.0180
TYR 2350.0168
ALA 2360.0175
GLY 2370.0182
ALA 2380.0156
ARG 2390.0110
PHE 2400.0142
VAL 2410.0179
PHE 2420.0197
SER 2430.0180
LEU 2440.0242
VAL 2450.0285
ASP 2460.0339
ALA 2470.0301
MET 2480.0344
ASN 2490.0372
GLY 2500.0313
LYS 2510.0375
GLU 2520.0386
GLY 2530.0487
VAL 2540.0179
VAL 2550.0111
GLU 2560.0142
CYS 2570.0166
SER 2580.0114
PHE 2590.0086
VAL 2600.0050
LYS 2610.0019
SER 2620.0119
GLN 2630.0218
GLU 2640.0277
THR 2650.0306
GLU 2660.0284
CYS 2670.0173
THR 2680.0107
TYR 2690.0059
PHE 2700.0092
SER 2710.0121
THR 2720.0149
PRO 2730.0165
LEU 2740.0140
LEU 2750.0115
LEU 2760.0173
GLY 2770.0191
LYS 2780.0221
LYS 2790.0240
GLY 2800.0216
ILE 2810.0192
GLU 2820.0137
LYS 2830.0130
ASN 2840.0160
LEU 2850.0163
GLY 2860.0285
ILE 2870.0282
GLY 2880.0454
LYS 2890.0568
VAL 2900.0274
SER 2910.0305
SER 2920.0375
PHE 2930.0302
GLU 2940.0252
GLU 2950.0280
LYS 2960.0298
MET 2970.0265
ILE 2980.0227
SER 2990.0292
ASP 3000.0252
ALA 3010.0183
ILE 3020.0171
PRO 3030.0166
GLU 3040.0056
LEU 3050.0050
LYS 3060.0033
ALA 3070.0104
SER 3080.0167
ILE 3090.0150
LYS 3100.0222
LYS 3110.0202
GLY 3120.0181
GLU 3130.0195
ASP 3140.0342
PHE 3150.0265
VAL 3160.0250
LYS 3170.0344
THR 3180.0525
LEU 3190.0430
ASN 60.0088
ALA 70.0084
LYS 80.0102
VAL 90.0090
ALA 100.0093
VAL 110.0082
LEU 120.0079
GLY 130.0076
ALA 140.0066
SER 150.0081
GLY 160.0093
GLY 170.0098
ILE 180.0066
GLY 190.0038
GLN 200.0046
PRO 210.0060
LEU 220.0043
SER 230.0022
LEU 240.0060
LEU 250.0061
LEU 260.0032
LYS 270.0070
ASN 280.0096
SER 290.0067
PRO 300.0072
LEU 310.0044
VAL 320.0061
SER 330.0109
ARG 340.0089
LEU 350.0058
THR 360.0064
LEU 370.0060
TYR 380.0113
ASP 390.0105
ILE 400.0098
ALA 410.0096
HIS 420.0096
THR 430.0115
PRO 440.0167
GLY 450.0223
VAL 460.0157
ALA 470.0189
ALA 480.0227
ASP 490.0228
LEU 500.0162
SER 510.0184
HIS 520.0202
ILE 530.0202
GLU 540.0171
THR 550.0155
LYS 560.0156
ALA 570.0152
ALA 580.0134
VAL 590.0068
LYS 600.0031
GLY 610.0052
TYR 620.0129
LEU 630.0118
GLY 640.0106
PRO 650.0102
GLU 660.0219
GLN 670.0204
LEU 680.0136
PRO 690.0152
ASP 700.0167
CYS 710.0152
LEU 720.0125
LYS 730.0148
GLY 740.0131
CYS 750.0118
ASP 760.0127
VAL 770.0110
VAL 780.0086
VAL 790.0076
ILE 800.0069
PRO 810.0065
ALA 820.0053
GLY 830.0049
VAL 840.0043
PRO 850.0043
ARG 860.0071
LYS 870.0072
PRO 880.0036
GLY 890.0062
MET 900.0094
THR 910.0073
ARG 920.0044
ASP 930.0051
ASP 940.0068
LEU 950.0059
PHE 960.0040
ASN 970.0068
THR 980.0059
ASN 990.0051
ALA 1000.0041
THR 1010.0062
ILE 1020.0054
VAL 1030.0052
ALA 1040.0033
THR 1050.0050
LEU 1060.0069
THR 1070.0047
ALA 1080.0048
ALA 1090.0077
CYS 1100.0075
ALA 1110.0030
GLN 1120.0074
HIS 1130.0103
CYS 1140.0077
PRO 1150.0051
GLU 1160.0069
ALA 1170.0097
MET 1180.0067
ILE 1190.0059
CYS 1200.0058
VAL 1210.0050
ILE 1220.0038
ALA 1230.0027
ASN 1240.0030
PRO 1250.0036
VAL 1260.0051
ASN 1270.0046
SER 1280.0056
THR 1290.0064
ILE 1300.0076
PRO 1310.0076
ILE 1320.0071
THR 1330.0065
ALA 1340.0086
GLU 1350.0073
VAL 1360.0031
PHE 1370.0039
LYS 1380.0096
LYS 1390.0095
HIS 1400.0083
GLY 1410.0107
VAL 1420.0044
TYR 1430.0064
ASN 1440.0078
PRO 1450.0102
ASN 1460.0063
LYS 1470.0067
ILE 1480.0065
PHE 1490.0057
GLY 1500.0014
VAL 1510.0008
THR 1520.0015
THR 1530.0022
LEU 1540.0039
ASP 1550.0037
ILE 1560.0033
VAL 1570.0027
ARG 1580.0027
ALA 1590.0024
ASN 1600.0023
THR 1610.0025
PHE 1620.0029
VAL 1630.0030
ALA 1640.0037
GLU 1650.0038
LEU 1660.0029
LYS 1670.0041
GLY 1680.0068
LEU 1690.0079
ASP 1700.0059
PRO 1710.0035
ALA 1720.0047
ARG 1730.0064
VAL 1740.0042
ASN 1750.0035
VAL 1760.0047
PRO 1770.0070
VAL 1780.0057
ILE 1790.0054
GLY 1800.0048
GLY 1810.0049
HIS 1820.0029
ALA 1830.0043
GLY 1840.0059
LYS 1850.0062
THR 1860.0050
ILE 1870.0050
ILE 1880.0048
PRO 1890.0047
LEU 1900.0059
ILE 1910.0044
SER 1920.0072
GLN 1930.0075
CYS 1940.0075
THR 1950.0079
PRO 1960.0103
LYS 1970.0124
VAL 1980.0059
ASP 1990.0077
PHE 2000.0110
PRO 2010.0205
GLN 2020.0125
ASP 2030.0066
GLN 2040.0058
LEU 2050.0062
THR 2060.0056
ALA 2070.0058
LEU 2080.0040
THR 2090.0045
GLY 2100.0034
ARG 2110.0042
ILE 2120.0037
GLN 2130.0038
GLU 2140.0035
ALA 2150.0044
GLY 2160.0031
THR 2170.0022
GLU 2180.0051
VAL 2190.0067
VAL 2200.0058
LYS 2210.0059
ALA 2220.0098
LYS 2230.0108
ALA 2240.0124
GLY 2250.0135
ALA 2260.0129
GLY 2270.0102
SER 2280.0071
ALA 2290.0058
THR 2300.0047
LEU 2310.0044
SER 2320.0038
MET 2330.0038
MET 2330.0038
ALA 2340.0048
TYR 2350.0041
ALA 2360.0039
GLY 2370.0040
ALA 2380.0037
ARG 2390.0030
PHE 2400.0028
VAL 2410.0036
PHE 2420.0030
SER 2430.0038
LEU 2440.0034
VAL 2450.0021
ASP 2460.0030
ALA 2470.0029
MET 2480.0004
ASN 2490.0025
GLY 2500.0052
LYS 2510.0070
GLU 2520.0059
GLY 2530.0077
VAL 2540.0048
VAL 2550.0041
GLU 2560.0038
CYS 2570.0044
SER 2580.0046
PHE 2590.0042
VAL 2600.0043
LYS 2610.0043
SER 2620.0038
GLN 2630.0037
GLU 2640.0054
THR 2650.0070
GLU 2660.0095
CYS 2670.0052
THR 2680.0065
TYR 2690.0048
PHE 2700.0024
SER 2710.0043
THR 2720.0052
PRO 2730.0073
LEU 2740.0053
LEU 2750.0060
LEU 2760.0055
GLY 2770.0056
LYS 2780.0058
LYS 2790.0043
GLY 2800.0043
ILE 2810.0044
GLU 2820.0081
LYS 2830.0083
ASN 2840.0077
LEU 2850.0079
GLY 2860.0113
ILE 2870.0101
GLY 2880.0125
LYS 2890.0133
VAL 2900.0156
SER 2910.0157
SER 2920.0137
PHE 2930.0109
GLU 2940.0044
GLU 2950.0059
LYS 2960.0047
MET 2970.0070
ILE 2980.0065
SER 2990.0107
ASP 3000.0120
ALA 3010.0069
ILE 3020.0037
PRO 3030.0023
GLU 3040.0020
LEU 3050.0020
LYS 3060.0042
ALA 3070.0058
SER 3080.0070
ILE 3090.0074
LYS 3100.0068
LYS 3110.0065
GLY 3120.0082
GLU 3130.0085
ASP 3140.0071
PHE 3150.0059
VAL 3160.0064
LYS 3170.0061
THR 3180.0052
LEU 3190.0067

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.