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***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0924
ASN 60.0071
ALA 70.0061
LYS 80.0064
VAL 90.0069
ALA 100.0076
VAL 110.0095
LEU 120.0087
GLY 130.0102
ALA 140.0096
SER 150.0110
GLY 160.0129
GLY 170.0143
ILE 180.0108
GLY 190.0103
GLN 200.0099
PRO 210.0093
LEU 220.0085
SER 230.0095
LEU 240.0079
LEU 250.0069
LEU 260.0081
LYS 270.0078
ASN 280.0074
SER 290.0078
PRO 300.0075
LEU 310.0097
VAL 320.0096
SER 330.0101
ARG 340.0081
LEU 350.0087
THR 360.0068
LEU 370.0075
TYR 380.0054
ASP 390.0099
ILE 400.0119
ALA 410.0168
HIS 420.0115
THR 430.0093
PRO 440.0090
GLY 450.0072
VAL 460.0063
ALA 470.0054
ALA 480.0063
ASP 490.0056
LEU 500.0068
SER 510.0049
HIS 520.0063
ILE 530.0066
GLU 540.0057
THR 550.0067
LYS 560.0083
ALA 570.0097
ALA 580.0106
VAL 590.0107
LYS 600.0095
GLY 610.0096
TYR 620.0099
LEU 630.0109
GLY 640.0064
PRO 650.0027
GLU 660.0118
GLN 670.0075
LEU 680.0031
PRO 690.0104
ASP 700.0056
CYS 710.0023
LEU 720.0084
LYS 730.0093
GLY 740.0064
CYS 750.0063
ASP 760.0060
VAL 770.0062
VAL 780.0088
VAL 790.0091
ILE 800.0084
PRO 810.0088
ALA 820.0079
GLY 830.0073
VAL 840.0093
PRO 850.0155
ARG 860.0176
LYS 870.0211
PRO 880.0216
GLY 890.0286
MET 900.0187
THR 910.0162
ARG 920.0111
ASP 930.0111
ASP 940.0085
LEU 950.0072
PHE 960.0063
ASN 970.0076
THR 980.0080
ASN 990.0091
ALA 1000.0099
THR 1010.0089
THR 1010.0089
ILE 1020.0113
VAL 1030.0128
ALA 1040.0117
THR 1050.0120
LEU 1060.0152
THR 1070.0172
ALA 1080.0167
ALA 1090.0166
CYS 1100.0165
ALA 1110.0185
GLN 1120.0173
HIS 1130.0145
CYS 1140.0118
PRO 1150.0096
GLU 1160.0081
ALA 1170.0095
MET 1180.0051
MET 1180.0051
ILE 1190.0045
CYS 1200.0051
VAL 1210.0045
ILE 1220.0050
ALA 1230.0040
ASN 1240.0046
PRO 1250.0046
VAL 1260.0023
ASN 1270.0024
SER 1280.0030
THR 1290.0026
ILE 1300.0082
PRO 1310.0066
ILE 1320.0060
THR 1330.0060
ALA 1340.0078
GLU 1350.0053
VAL 1360.0089
PHE 1370.0074
LYS 1380.0044
LYS 1390.0091
HIS 1400.0135
GLY 1410.0120
VAL 1420.0059
TYR 1430.0025
ASN 1440.0054
PRO 1450.0113
ASN 1460.0075
LYS 1470.0069
ILE 1480.0072
PHE 1490.0087
GLY 1500.0058
VAL 1510.0056
THR 1520.0044
THR 1530.0046
LEU 1540.0031
ASP 1550.0035
ILE 1560.0046
VAL 1570.0045
ARG 1580.0033
ALA 1590.0035
ASN 1600.0053
THR 1610.0056
PHE 1620.0059
VAL 1630.0066
ALA 1640.0077
GLU 1650.0068
LEU 1660.0066
LYS 1670.0077
GLY 1680.0057
LEU 1690.0099
ASP 1700.0140
PRO 1710.0115
ALA 1720.0170
ARG 1730.0170
VAL 1740.0097
ASN 1750.0061
VAL 1760.0017
PRO 1770.0044
VAL 1780.0073
ILE 1790.0065
GLY 1800.0061
GLY 1810.0067
HIS 1820.0080
ALA 1830.0097
GLY 1840.0109
LYS 1850.0111
THR 1860.0110
ILE 1870.0114
ILE 1880.0117
PRO 1890.0128
LEU 1900.0149
ILE 1910.0132
SER 1920.0123
GLN 1930.0150
CYS 1940.0120
THR 1950.0135
PRO 1960.0154
LYS 1970.0148
VAL 1980.0148
ASP 1990.0177
PHE 2000.0193
PRO 2010.0226
GLN 2020.0168
ASP 2030.0220
GLN 2040.0192
LEU 2050.0135
THR 2060.0112
ALA 2070.0154
LEU 2080.0122
THR 2090.0115
GLY 2100.0049
ARG 2110.0052
ILE 2120.0051
GLN 2130.0065
GLU 2140.0050
ALA 2150.0058
GLY 2160.0024
THR 2170.0058
GLU 2180.0124
VAL 2190.0073
VAL 2200.0037
LYS 2210.0066
ALA 2220.0120
LYS 2230.0104
ALA 2240.0109
GLY 2250.0168
ALA 2260.0149
GLY 2270.0113
SER 2280.0056
ALA 2290.0014
THR 2300.0032
LEU 2310.0022
SER 2320.0019
MET 2330.0040
MET 2330.0040
ALA 2340.0042
TYR 2350.0045
ALA 2360.0058
GLY 2370.0063
ALA 2380.0060
ARG 2390.0061
PHE 2400.0061
VAL 2410.0062
PHE 2420.0100
SER 2430.0066
LEU 2440.0072
VAL 2450.0088
ASP 2460.0086
ALA 2470.0056
MET 2480.0107
ASN 2490.0106
GLY 2500.0193
LYS 2510.0089
GLU 2520.0214
GLY 2530.0277
VAL 2540.0093
VAL 2550.0095
GLU 2560.0103
CYS 2570.0107
SER 2580.0105
PHE 2590.0110
VAL 2600.0121
LYS 2610.0130
SER 2620.0173
GLN 2630.0165
GLU 2640.0124
THR 2650.0105
GLU 2660.0109
CYS 2670.0111
THR 2680.0128
TYR 2690.0129
PHE 2700.0110
SER 2710.0110
THR 2720.0097
PRO 2730.0110
LEU 2740.0125
LEU 2750.0102
LEU 2760.0107
GLY 2770.0099
LYS 2780.0120
LYS 2790.0113
GLY 2800.0120
ILE 2810.0133
GLU 2820.0145
LYS 2830.0148
ASN 2840.0156
LEU 2850.0150
GLY 2860.0086
ILE 2870.0100
GLY 2880.0284
LYS 2890.0475
VAL 2900.0224
SER 2910.0162
SER 2920.0220
PHE 2930.0138
GLU 2940.0170
GLU 2950.0228
LYS 2960.0195
MET 2970.0171
ILE 2980.0170
SER 2990.0153
ASP 3000.0162
ALA 3010.0161
ILE 3020.0059
PRO 3030.0079
GLU 3040.0100
LEU 3050.0087
LYS 3060.0087
ALA 3070.0101
SER 3080.0097
ILE 3090.0094
LYS 3100.0106
LYS 3110.0097
GLY 3120.0085
GLU 3130.0077
ASP 3140.0126
PHE 3150.0087
VAL 3160.0060
LYS 3170.0091
THR 3180.0069
LEU 3190.0148
ASN 60.0170
ALA 70.0119
LYS 80.0096
VAL 90.0059
ALA 100.0078
VAL 110.0082
LEU 120.0095
GLY 130.0096
ALA 140.0099
SER 150.0102
GLY 160.0113
GLY 170.0115
ILE 180.0103
GLY 190.0083
GLN 200.0066
PRO 210.0071
LEU 220.0073
SER 230.0043
LEU 240.0041
LEU 250.0050
LEU 260.0038
LYS 270.0035
ASN 280.0084
SER 290.0097
PRO 300.0149
LEU 310.0113
VAL 320.0099
SER 330.0132
ARG 340.0075
LEU 350.0081
THR 360.0102
LEU 370.0113
TYR 380.0107
ASP 390.0148
ILE 400.0187
ALA 410.0222
HIS 420.0182
THR 430.0183
PRO 440.0183
GLY 450.0172
VAL 460.0116
ALA 470.0136
ALA 480.0123
ASP 490.0081
LEU 500.0058
SER 510.0082
HIS 520.0070
ILE 530.0061
GLU 540.0113
THR 550.0104
LYS 560.0110
ALA 570.0103
ALA 580.0081
VAL 590.0089
LYS 600.0126
GLY 610.0155
TYR 620.0145
LEU 630.0156
GLY 640.0176
PRO 650.0207
GLU 660.0232
GLN 670.0174
LEU 680.0126
PRO 690.0193
ASP 700.0150
CYS 710.0132
LEU 720.0105
LYS 730.0142
GLY 740.0133
CYS 750.0082
ASP 760.0091
VAL 770.0045
VAL 780.0068
VAL 790.0081
ILE 800.0121
PRO 810.0144
ALA 820.0155
GLY 830.0096
VAL 840.0073
PRO 850.0107
ARG 860.0105
LYS 870.0120
PRO 880.0167
GLY 890.0194
MET 900.0150
THR 910.0147
ARG 920.0108
ASP 930.0130
ASP 940.0136
LEU 950.0073
PHE 960.0104
ASN 970.0180
THR 980.0122
ASN 990.0126
ALA 1000.0157
THR 1010.0200
ILE 1020.0175
VAL 1030.0160
ALA 1040.0154
THR 1050.0162
LEU 1060.0081
THR 1070.0047
ALA 1080.0073
ALA 1090.0050
CYS 1100.0053
ALA 1110.0114
GLN 1120.0136
HIS 1130.0115
CYS 1140.0135
PRO 1150.0134
GLU 1160.0132
ALA 1170.0118
MET 1180.0140
ILE 1190.0133
CYS 1200.0097
VAL 1210.0138
ILE 1220.0136
ALA 1230.0112
ASN 1240.0075
PRO 1250.0056
VAL 1260.0104
ASN 1270.0102
SER 1280.0102
THR 1290.0112
ILE 1300.0122
PRO 1310.0129
ILE 1320.0113
THR 1330.0115
ALA 1340.0081
GLU 1350.0100
VAL 1360.0070
PHE 1370.0041
LYS 1380.0086
LYS 1390.0109
HIS 1400.0097
GLY 1410.0092
VAL 1420.0087
TYR 1430.0068
ASN 1440.0086
PRO 1450.0102
ASN 1460.0203
LYS 1470.0205
ILE 1480.0171
PHE 1490.0111
GLY 1500.0096
VAL 1510.0092
THR 1520.0089
THR 1530.0083
LEU 1540.0050
ASP 1550.0049
ILE 1560.0048
VAL 1570.0049
ARG 1580.0047
ALA 1590.0036
ASN 1600.0027
THR 1610.0045
PHE 1620.0095
VAL 1630.0084
ALA 1640.0089
GLU 1650.0108
LEU 1660.0145
LYS 1670.0137
GLY 1680.0172
LEU 1690.0155
ASP 1700.0055
PRO 1710.0060
ALA 1720.0041
ARG 1730.0034
VAL 1740.0041
ASN 1750.0029
VAL 1760.0058
PRO 1770.0107
VAL 1780.0111
ILE 1790.0096
GLY 1800.0087
GLY 1810.0100
HIS 1820.0075
ALA 1830.0041
GLY 1840.0012
LYS 1850.0028
THR 1860.0054
ILE 1870.0078
ILE 1880.0065
PRO 1890.0091
LEU 1900.0131
ILE 1910.0109
SER 1920.0130
GLN 1930.0176
CYS 1940.0070
THR 1950.0039
PRO 1960.0074
LYS 1970.0078
VAL 1980.0115
ASP 1990.0104
PHE 2000.0109
PRO 2010.0150
GLN 2020.0126
ASP 2030.0124
GLN 2040.0112
LEU 2050.0111
THR 2060.0074
ALA 2070.0070
LEU 2080.0062
THR 2090.0065
GLY 2100.0054
ARG 2110.0069
ILE 2120.0052
GLN 2130.0072
GLU 2140.0124
ALA 2150.0122
GLY 2160.0176
THR 2170.0216
GLU 2180.0223
VAL 2190.0111
VAL 2200.0126
LYS 2210.0222
ALA 2220.0119
LYS 2230.0088
ALA 2240.0149
GLY 2250.0118
ALA 2260.0125
GLY 2270.0056
SER 2280.0050
ALA 2290.0072
THR 2300.0088
LEU 2310.0092
SER 2320.0107
MET 2330.0100
MET 2330.0100
ALA 2340.0098
TYR 2350.0091
ALA 2360.0088
GLY 2370.0081
ALA 2380.0082
ARG 2390.0048
PHE 2400.0054
VAL 2410.0063
PHE 2420.0033
SER 2430.0107
LEU 2440.0132
VAL 2450.0068
ASP 2460.0095
ALA 2470.0197
MET 2480.0082
ASN 2490.0155
GLY 2500.0575
LYS 2510.0376
GLU 2520.0717
GLY 2530.0924
VAL 2540.0243
VAL 2550.0196
GLU 2560.0136
CYS 2570.0130
SER 2580.0106
PHE 2590.0100
VAL 2600.0102
LYS 2610.0104
SER 2620.0155
GLN 2630.0177
GLU 2640.0212
THR 2650.0235
GLU 2660.0307
CYS 2670.0249
THR 2680.0213
TYR 2690.0170
PHE 2700.0123
SER 2710.0124
THR 2720.0104
PRO 2730.0114
LEU 2740.0180
LEU 2750.0282
LEU 2760.0267
GLY 2770.0379
LYS 2780.0422
LYS 2790.0469
GLY 2800.0335
ILE 2810.0316
GLU 2820.0575
LYS 2830.0504
ASN 2840.0274
LEU 2850.0380
GLY 2860.0194
ILE 2870.0109
GLY 2880.0165
LYS 2890.0252
VAL 2900.0280
SER 2910.0257
SER 2920.0253
PHE 2930.0167
GLU 2940.0145
GLU 2950.0261
LYS 2960.0251
MET 2970.0129
ILE 2980.0119
SER 2990.0213
ASP 3000.0196
ALA 3010.0077
ILE 3020.0120
PRO 3030.0104
GLU 3040.0086
LEU 3050.0127
LYS 3060.0191
ALA 3070.0162
SER 3080.0111
ILE 3090.0156
LYS 3100.0153
LYS 3110.0126
GLY 3120.0135
GLU 3130.0173
ASP 3140.0182
PHE 3150.0186
VAL 3160.0206
LYS 3170.0218
THR 3180.0365
LEU 3190.0409

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.