CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0440
ASN 60.0216
ALA 70.0163
LYS 80.0164
VAL 90.0123
ALA 100.0100
VAL 110.0105
LEU 120.0086
GLY 130.0100
ALA 140.0102
SER 150.0094
GLY 160.0080
GLY 170.0082
ILE 180.0056
GLY 190.0048
GLN 200.0049
PRO 210.0062
LEU 220.0062
SER 230.0066
LEU 240.0062
LEU 250.0052
LEU 260.0062
LYS 270.0066
ASN 280.0063
SER 290.0076
PRO 300.0122
LEU 310.0153
VAL 320.0123
SER 330.0200
ARG 340.0173
LEU 350.0154
THR 360.0135
LEU 370.0126
TYR 380.0141
ASP 390.0176
ILE 400.0201
ALA 410.0185
HIS 420.0122
THR 430.0100
PRO 440.0077
GLY 450.0080
VAL 460.0060
ALA 470.0046
ALA 480.0045
ASP 490.0047
LEU 500.0061
SER 510.0047
HIS 520.0052
ILE 530.0051
GLU 540.0095
THR 550.0077
LYS 560.0104
ALA 570.0130
ALA 580.0161
VAL 590.0131
LYS 600.0120
GLY 610.0102
TYR 620.0123
LEU 630.0170
GLY 640.0219
PRO 650.0232
GLU 660.0173
GLN 670.0092
LEU 680.0126
PRO 690.0061
ASP 700.0073
CYS 710.0124
LEU 720.0139
LYS 730.0143
GLY 740.0169
CYS 750.0136
ASP 760.0117
VAL 770.0108
VAL 780.0078
VAL 790.0067
ILE 800.0049
PRO 810.0039
ALA 820.0029
GLY 830.0024
VAL 840.0027
PRO 850.0032
ARG 860.0051
LYS 870.0067
PRO 880.0115
GLY 890.0147
MET 900.0083
THR 910.0096
ARG 920.0093
ASP 930.0100
ASP 940.0064
LEU 950.0068
PHE 960.0064
ASN 970.0046
THR 980.0053
ASN 990.0068
ALA 1000.0059
THR 1010.0075
THR 1010.0075
ILE 1020.0054
VAL 1030.0047
ALA 1040.0057
THR 1050.0072
LEU 1060.0053
THR 1070.0074
ALA 1080.0071
ALA 1090.0067
CYS 1100.0123
ALA 1110.0124
GLN 1120.0125
HIS 1130.0138
CYS 1140.0138
PRO 1150.0131
GLU 1160.0110
ALA 1170.0124
MET 1180.0115
MET 1180.0115
ILE 1190.0099
CYS 1200.0081
VAL 1210.0067
ILE 1220.0046
ALA 1230.0064
ASN 1240.0075
PRO 1250.0092
VAL 1260.0085
ASN 1270.0078
SER 1280.0073
THR 1290.0079
ILE 1300.0077
PRO 1310.0074
ILE 1320.0060
THR 1330.0061
ALA 1340.0081
GLU 1350.0054
VAL 1360.0043
PHE 1370.0043
LYS 1380.0056
LYS 1390.0089
HIS 1400.0120
GLY 1410.0110
VAL 1420.0060
TYR 1430.0033
ASN 1440.0037
PRO 1450.0078
ASN 1460.0110
LYS 1470.0116
ILE 1480.0102
PHE 1490.0088
GLY 1500.0077
VAL 1510.0068
THR 1520.0051
THR 1530.0044
LEU 1540.0038
ASP 1550.0031
ILE 1560.0024
VAL 1570.0036
ARG 1580.0047
ALA 1590.0039
ASN 1600.0059
THR 1610.0081
PHE 1620.0084
VAL 1630.0065
ALA 1640.0064
GLU 1650.0089
LEU 1660.0140
LYS 1670.0135
GLY 1680.0181
LEU 1690.0162
ASP 1700.0144
PRO 1710.0086
ALA 1720.0052
ARG 1730.0104
VAL 1740.0033
ASN 1750.0049
VAL 1760.0079
PRO 1770.0129
VAL 1780.0098
ILE 1790.0079
GLY 1800.0078
GLY 1810.0096
HIS 1820.0075
ALA 1830.0088
GLY 1840.0096
LYS 1850.0110
THR 1860.0086
ILE 1870.0081
ILE 1880.0072
PRO 1890.0088
LEU 1900.0151
ILE 1910.0137
SER 1920.0133
GLN 1930.0182
CYS 1940.0096
THR 1950.0071
PRO 1960.0091
LYS 1970.0104
VAL 1980.0071
ASP 1990.0073
PHE 2000.0142
PRO 2010.0237
GLN 2020.0196
ASP 2030.0208
GLN 2040.0160
LEU 2050.0144
THR 2060.0125
ALA 2070.0098
LEU 2080.0071
THR 2090.0103
GLY 2100.0063
ARG 2110.0066
ILE 2120.0048
GLN 2130.0035
GLU 2140.0078
ALA 2150.0056
GLY 2160.0048
THR 2170.0067
GLU 2180.0077
VAL 2190.0057
VAL 2200.0045
LYS 2210.0095
ALA 2220.0079
LYS 2230.0085
ALA 2240.0114
GLY 2250.0117
ALA 2260.0112
GLY 2270.0070
SER 2280.0045
ALA 2290.0057
THR 2300.0060
LEU 2310.0064
SER 2320.0051
MET 2330.0059
MET 2330.0059
ALA 2340.0078
TYR 2350.0069
ALA 2360.0053
GLY 2370.0095
ALA 2380.0100
ARG 2390.0087
PHE 2400.0099
VAL 2410.0120
PHE 2420.0140
SER 2430.0173
LEU 2440.0153
VAL 2450.0126
ASP 2460.0210
ALA 2470.0178
MET 2480.0146
ASN 2490.0190
GLY 2500.0206
LYS 2510.0194
GLU 2520.0198
GLY 2530.0206
VAL 2540.0094
VAL 2550.0082
GLU 2560.0085
CYS 2570.0087
SER 2580.0096
PHE 2590.0085
VAL 2600.0099
LYS 2610.0102
SER 2620.0162
GLN 2630.0186
GLU 2640.0179
THR 2650.0175
GLU 2660.0220
CYS 2670.0168
THR 2680.0147
TYR 2690.0126
PHE 2700.0091
SER 2710.0094
THR 2720.0072
PRO 2730.0071
LEU 2740.0077
LEU 2750.0118
LEU 2760.0148
GLY 2770.0209
LYS 2780.0265
LYS 2790.0252
GLY 2800.0194
ILE 2810.0152
GLU 2820.0229
LYS 2830.0183
ASN 2840.0107
LEU 2850.0115
GLY 2860.0098
ILE 2870.0059
GLY 2880.0249
LYS 2890.0434
VAL 2900.0233
SER 2910.0156
SER 2920.0153
PHE 2930.0067
GLU 2940.0085
GLU 2950.0189
LYS 2960.0181
MET 2970.0072
ILE 2980.0097
SER 2990.0158
ASP 3000.0147
ALA 3010.0082
ILE 3020.0127
PRO 3030.0124
GLU 3040.0098
LEU 3050.0113
LYS 3060.0147
ALA 3070.0125
SER 3080.0079
ILE 3090.0103
LYS 3100.0112
LYS 3110.0073
GLY 3120.0079
GLU 3130.0114
ASP 3140.0171
PHE 3150.0110
VAL 3160.0177
LYS 3170.0235
THR 3180.0384
LEU 3190.0378
ASN 60.0166
ALA 70.0127
LYS 80.0091
VAL 90.0080
ALA 100.0030
VAL 110.0037
LEU 120.0063
GLY 130.0089
ALA 140.0077
SER 150.0097
GLY 160.0111
GLY 170.0103
ILE 180.0078
GLY 190.0083
GLN 200.0082
PRO 210.0080
LEU 220.0076
SER 230.0063
LEU 240.0076
LEU 250.0093
LEU 260.0131
LYS 270.0132
ASN 280.0180
SER 290.0206
PRO 300.0258
LEU 310.0214
VAL 320.0202
SER 330.0204
ARG 340.0143
LEU 350.0095
THR 360.0046
LEU 370.0018
TYR 380.0048
ASP 390.0124
ILE 400.0163
ALA 410.0209
HIS 420.0131
THR 430.0107
PRO 440.0135
GLY 450.0111
VAL 460.0047
ALA 470.0073
ALA 480.0086
ASP 490.0063
LEU 500.0078
SER 510.0094
HIS 520.0093
ILE 530.0109
GLU 540.0124
THR 550.0189
LYS 560.0242
ALA 570.0255
ALA 580.0211
VAL 590.0127
LYS 600.0103
GLY 610.0064
TYR 620.0054
LEU 630.0093
GLY 640.0106
PRO 650.0159
GLU 660.0171
GLN 670.0092
LEU 680.0067
PRO 690.0145
ASP 700.0108
CYS 710.0077
LEU 720.0064
LYS 730.0079
GLY 740.0013
CYS 750.0033
ASP 760.0042
VAL 770.0061
VAL 780.0049
VAL 790.0057
ILE 800.0075
PRO 810.0102
ALA 820.0120
GLY 830.0064
VAL 840.0060
PRO 850.0117
ARG 860.0263
LYS 870.0306
PRO 880.0256
GLY 890.0332
MET 900.0332
THR 910.0286
ARG 920.0177
ASP 930.0218
ASP 940.0216
LEU 950.0115
PHE 960.0076
ASN 970.0076
THR 980.0047
ASN 990.0042
ALA 1000.0072
THR 1010.0075
ILE 1020.0089
VAL 1030.0094
ALA 1040.0052
THR 1050.0069
LEU 1060.0079
THR 1070.0054
ALA 1080.0057
ALA 1090.0090
CYS 1100.0092
ALA 1110.0095
GLN 1120.0105
HIS 1130.0096
CYS 1140.0106
PRO 1150.0106
GLU 1160.0096
ALA 1170.0094
MET 1180.0086
ILE 1190.0062
CYS 1200.0087
VAL 1210.0114
ILE 1220.0136
ALA 1230.0114
ASN 1240.0112
PRO 1250.0119
VAL 1260.0144
ASN 1270.0143
SER 1280.0151
THR 1290.0157
ILE 1300.0172
PRO 1310.0152
ILE 1320.0130
THR 1330.0109
ALA 1340.0075
GLU 1350.0069
VAL 1360.0044
PHE 1370.0053
LYS 1380.0112
LYS 1390.0131
HIS 1400.0157
GLY 1410.0173
VAL 1420.0112
TYR 1430.0064
ASN 1440.0073
PRO 1450.0068
ASN 1460.0067
LYS 1470.0095
ILE 1480.0090
PHE 1490.0097
GLY 1500.0105
VAL 1510.0088
THR 1520.0073
THR 1530.0064
LEU 1540.0058
ASP 1550.0054
ILE 1560.0062
VAL 1570.0071
ARG 1580.0081
ALA 1590.0084
ASN 1600.0094
THR 1610.0112
PHE 1620.0129
VAL 1630.0139
ALA 1640.0164
GLU 1650.0215
LEU 1660.0197
LYS 1670.0226
GLY 1680.0258
LEU 1690.0194
ASP 1700.0344
PRO 1710.0230
ALA 1720.0268
ARG 1730.0284
VAL 1740.0152
ASN 1750.0150
VAL 1760.0123
PRO 1770.0162
VAL 1780.0055
ILE 1790.0059
GLY 1800.0060
GLY 1810.0059
HIS 1820.0054
ALA 1830.0068
GLY 1840.0088
LYS 1850.0097
THR 1860.0060
ILE 1870.0065
ILE 1880.0070
PRO 1890.0075
LEU 1900.0184
ILE 1910.0189
SER 1920.0252
GLN 1930.0295
CYS 1940.0299
THR 1950.0241
PRO 1960.0243
LYS 1970.0373
VAL 1980.0344
ASP 1990.0154
PHE 2000.0084
PRO 2010.0259
GLN 2020.0396
ASP 2030.0440
GLN 2040.0306
LEU 2050.0154
THR 2060.0147
ALA 2070.0095
LEU 2080.0063
THR 2090.0098
GLY 2100.0061
ARG 2110.0063
ILE 2120.0056
GLN 2130.0088
GLU 2140.0057
ALA 2150.0063
GLY 2160.0073
THR 2170.0070
GLU 2180.0106
VAL 2190.0138
VAL 2200.0168
LYS 2210.0159
ALA 2220.0221
LYS 2230.0261
ALA 2240.0354
GLY 2250.0418
ALA 2260.0337
GLY 2270.0253
SER 2280.0148
ALA 2290.0078
THR 2300.0062
LEU 2310.0053
SER 2320.0051
MET 2330.0056
MET 2330.0056
ALA 2340.0042
TYR 2350.0047
ALA 2360.0046
GLY 2370.0041
ALA 2380.0046
ARG 2390.0035
PHE 2400.0013
VAL 2410.0025
PHE 2420.0094
SER 2430.0086
LEU 2440.0088
VAL 2450.0093
ASP 2460.0187
ALA 2470.0145
MET 2480.0192
ASN 2490.0237
GLY 2500.0210
LYS 2510.0254
GLU 2520.0229
GLY 2530.0285
VAL 2540.0068
VAL 2550.0072
GLU 2560.0064
CYS 2570.0064
SER 2580.0083
PHE 2590.0113
VAL 2600.0130
LYS 2610.0162
SER 2620.0235
GLN 2630.0306
GLU 2640.0269
THR 2650.0306
GLU 2660.0285
CYS 2670.0214
THR 2680.0234
TYR 2690.0156
PHE 2700.0131
SER 2710.0092
THR 2720.0080
PRO 2730.0062
LEU 2740.0092
LEU 2750.0118
LEU 2760.0086
GLY 2770.0160
LYS 2780.0275
LYS 2790.0300
GLY 2800.0195
ILE 2810.0131
GLU 2820.0242
LYS 2830.0181
ASN 2840.0074
LEU 2850.0195
GLY 2860.0302
ILE 2870.0280
GLY 2880.0342
LYS 2890.0380
VAL 2900.0093
SER 2910.0181
SER 2920.0297
PHE 2930.0318
GLU 2940.0156
GLU 2950.0205
LYS 2960.0241
MET 2970.0207
ILE 2980.0133
SER 2990.0157
ASP 3000.0195
ALA 3010.0167
ILE 3020.0050
PRO 3030.0066
GLU 3040.0102
LEU 3050.0086
LYS 3060.0141
ALA 3070.0209
SER 3080.0217
ILE 3090.0189
LYS 3100.0180
LYS 3110.0165
GLY 3120.0156
GLU 3130.0156
ASP 3140.0212
PHE 3150.0127
VAL 3160.0084
LYS 3170.0165
THR 3180.0207
LEU 3190.0164

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.