CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 62  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0597
ASN 60.0151
ALA 70.0148
LYS 80.0166
VAL 90.0170
ALA 100.0130
VAL 110.0131
LEU 120.0129
GLY 130.0158
ALA 140.0148
SER 150.0148
GLY 160.0178
GLY 170.0155
ILE 180.0097
GLY 190.0094
GLN 200.0075
PRO 210.0060
LEU 220.0064
SER 230.0052
LEU 240.0031
LEU 250.0046
LEU 260.0091
LYS 270.0070
ASN 280.0080
SER 290.0115
PRO 300.0137
LEU 310.0129
VAL 320.0148
SER 330.0156
ARG 340.0172
LEU 350.0150
THR 360.0121
LEU 370.0110
TYR 380.0142
ASP 390.0206
ILE 400.0259
ALA 410.0290
HIS 420.0192
THR 430.0117
PRO 440.0133
GLY 450.0152
VAL 460.0067
ALA 470.0057
ALA 480.0114
ASP 490.0118
LEU 500.0043
SER 510.0067
HIS 520.0067
ILE 530.0052
GLU 540.0035
THR 550.0059
LYS 560.0097
ALA 570.0116
ALA 580.0137
VAL 590.0089
LYS 600.0082
GLY 610.0046
TYR 620.0082
LEU 630.0115
GLY 640.0111
PRO 650.0163
GLU 660.0171
GLN 670.0138
LEU 680.0127
PRO 690.0155
ASP 700.0134
CYS 710.0160
LEU 720.0132
LYS 730.0159
GLY 740.0145
CYS 750.0144
ASP 760.0142
VAL 770.0145
VAL 780.0070
VAL 790.0069
ILE 800.0078
PRO 810.0128
ALA 820.0172
GLY 830.0110
VAL 840.0061
PRO 850.0086
ARG 860.0225
LYS 870.0229
PRO 880.0225
GLY 890.0306
MET 900.0245
THR 910.0249
ARG 920.0202
ASP 930.0227
ASP 940.0229
LEU 950.0123
PHE 960.0095
ASN 970.0096
THR 980.0044
ASN 990.0056
ALA 1000.0059
THR 1010.0076
THR 1010.0076
ILE 1020.0150
VAL 1030.0123
ALA 1040.0091
THR 1050.0132
LEU 1060.0094
THR 1070.0051
ALA 1080.0137
ALA 1090.0125
CYS 1100.0120
ALA 1110.0184
GLN 1120.0268
HIS 1130.0252
CYS 1140.0214
PRO 1150.0226
GLU 1160.0224
ALA 1170.0181
MET 1180.0129
MET 1180.0129
ILE 1190.0071
CYS 1200.0033
VAL 1210.0050
ILE 1220.0125
ALA 1230.0096
ASN 1240.0094
PRO 1250.0109
VAL 1260.0096
ASN 1270.0096
SER 1280.0105
THR 1290.0106
ILE 1300.0119
PRO 1310.0104
ILE 1320.0103
THR 1330.0098
ALA 1340.0062
GLU 1350.0099
VAL 1360.0110
PHE 1370.0069
LYS 1380.0089
LYS 1390.0131
HIS 1400.0094
GLY 1410.0092
VAL 1420.0113
TYR 1430.0074
ASN 1440.0082
PRO 1450.0051
ASN 1460.0147
LYS 1470.0141
ILE 1480.0079
PHE 1490.0036
GLY 1500.0053
VAL 1510.0047
THR 1520.0044
THR 1530.0035
LEU 1540.0071
ASP 1550.0077
ILE 1560.0075
VAL 1570.0076
ARG 1580.0084
ALA 1590.0093
ASN 1600.0088
THR 1610.0088
PHE 1620.0094
VAL 1630.0108
ALA 1640.0095
GLU 1650.0091
LEU 1660.0094
LYS 1670.0147
GLY 1680.0142
LEU 1690.0124
ASP 1700.0154
PRO 1710.0115
ALA 1720.0110
ARG 1730.0132
VAL 1740.0156
ASN 1750.0195
VAL 1760.0186
PRO 1770.0229
VAL 1780.0124
ILE 1790.0114
GLY 1800.0107
GLY 1810.0115
HIS 1820.0041
ALA 1830.0037
GLY 1840.0038
LYS 1850.0035
THR 1860.0072
ILE 1870.0076
ILE 1880.0078
PRO 1890.0084
LEU 1900.0174
ILE 1910.0145
SER 1920.0196
GLN 1930.0275
CYS 1940.0308
THR 1950.0280
PRO 1960.0264
LYS 1970.0342
VAL 1980.0320
ASP 1990.0165
PHE 2000.0064
PRO 2010.0198
GLN 2020.0286
ASP 2030.0292
GLN 2040.0203
LEU 2050.0200
THR 2060.0188
ALA 2070.0138
LEU 2080.0107
THR 2090.0160
GLY 2100.0077
ARG 2110.0066
ILE 2120.0070
GLN 2130.0078
GLU 2140.0068
ALA 2150.0094
GLY 2160.0128
THR 2170.0116
GLU 2180.0156
VAL 2190.0156
VAL 2200.0181
LYS 2210.0171
ALA 2220.0148
LYS 2230.0181
ALA 2240.0269
GLY 2250.0328
ALA 2260.0224
GLY 2270.0191
SER 2280.0142
ALA 2290.0108
THR 2300.0071
LEU 2310.0062
SER 2320.0054
MET 2330.0060
MET 2330.0060
ALA 2340.0035
TYR 2350.0040
ALA 2360.0032
GLY 2370.0017
ALA 2380.0046
ARG 2390.0020
PHE 2400.0026
VAL 2410.0043
PHE 2420.0073
SER 2430.0065
LEU 2440.0083
VAL 2450.0087
ASP 2460.0160
ALA 2470.0122
MET 2480.0150
ASN 2490.0237
GLY 2500.0457
LYS 2510.0384
GLU 2520.0548
GLY 2530.0597
VAL 2540.0104
VAL 2550.0102
GLU 2560.0105
CYS 2570.0105
SER 2580.0022
PHE 2590.0061
VAL 2600.0093
LYS 2610.0144
SER 2620.0239
GLN 2630.0304
GLU 2640.0281
THR 2650.0319
GLU 2660.0306
CYS 2670.0237
THR 2680.0237
TYR 2690.0156
PHE 2700.0134
SER 2710.0107
THR 2720.0102
PRO 2730.0090
LEU 2740.0102
LEU 2750.0135
LEU 2760.0133
GLY 2770.0199
LYS 2780.0262
LYS 2790.0313
GLY 2800.0211
ILE 2810.0184
GLU 2820.0275
LYS 2830.0208
ASN 2840.0081
LEU 2850.0193
GLY 2860.0332
ILE 2870.0269
GLY 2880.0271
LYS 2890.0236
VAL 2900.0146
SER 2910.0227
SER 2920.0315
PHE 2930.0287
GLU 2940.0119
GLU 2950.0165
LYS 2960.0232
MET 2970.0194
ILE 2980.0101
SER 2990.0154
ASP 3000.0190
ALA 3010.0151
ILE 3020.0052
PRO 3030.0059
GLU 3040.0079
LEU 3050.0047
LYS 3060.0086
ALA 3070.0143
SER 3080.0146
ILE 3090.0115
LYS 3100.0128
LYS 3110.0125
GLY 3120.0093
GLU 3130.0087
ASP 3140.0164
PHE 3150.0099
VAL 3160.0088
LYS 3170.0181
THR 3180.0415
LEU 3190.0390
ASN 60.0179
ALA 70.0161
LYS 80.0145
VAL 90.0115
ALA 100.0063
VAL 110.0060
LEU 120.0079
GLY 130.0112
ALA 140.0082
SER 150.0079
GLY 160.0080
GLY 170.0053
ILE 180.0006
GLY 190.0009
GLN 200.0013
PRO 210.0016
LEU 220.0033
SER 230.0036
LEU 240.0039
LEU 250.0045
LEU 260.0087
LYS 270.0087
ASN 280.0087
SER 290.0113
PRO 300.0147
LEU 310.0161
VAL 320.0159
SER 330.0169
ARG 340.0158
LEU 350.0099
THR 360.0050
LEU 370.0034
TYR 380.0070
ASP 390.0155
ILE 400.0202
ALA 410.0263
HIS 420.0177
THR 430.0133
PRO 440.0142
GLY 450.0128
VAL 460.0042
ALA 470.0049
ALA 480.0084
ASP 490.0089
LEU 500.0077
SER 510.0085
HIS 520.0077
ILE 530.0071
GLU 540.0083
THR 550.0082
LYS 560.0117
ALA 570.0152
ALA 580.0174
VAL 590.0102
LYS 600.0095
GLY 610.0090
TYR 620.0117
LEU 630.0141
GLY 640.0060
PRO 650.0094
GLU 660.0230
GLN 670.0157
LEU 680.0061
PRO 690.0131
ASP 700.0095
CYS 710.0046
LEU 720.0074
LYS 730.0098
GLY 740.0122
CYS 750.0113
ASP 760.0134
VAL 770.0121
VAL 780.0062
VAL 790.0060
ILE 800.0064
PRO 810.0077
ALA 820.0127
GLY 830.0096
VAL 840.0128
PRO 850.0199
ARG 860.0292
LYS 870.0314
PRO 880.0251
GLY 890.0236
MET 900.0197
THR 910.0141
ARG 920.0126
ASP 930.0101
ASP 940.0148
LEU 950.0115
PHE 960.0085
ASN 970.0075
THR 980.0088
ASN 990.0046
ALA 1000.0040
THR 1010.0060
ILE 1020.0069
VAL 1030.0067
ALA 1040.0065
THR 1050.0073
LEU 1060.0092
THR 1070.0106
ALA 1080.0083
ALA 1090.0079
CYS 1100.0093
ALA 1110.0108
GLN 1120.0087
HIS 1130.0079
CYS 1140.0100
PRO 1150.0049
GLU 1160.0073
ALA 1170.0105
MET 1180.0072
ILE 1190.0064
CYS 1200.0060
VAL 1210.0067
ILE 1220.0054
ALA 1230.0046
ASN 1240.0054
PRO 1250.0068
VAL 1260.0021
ASN 1270.0014
SER 1280.0030
THR 1290.0037
ILE 1300.0039
PRO 1310.0049
ILE 1320.0044
THR 1330.0065
ALA 1340.0050
GLU 1350.0063
VAL 1360.0079
PHE 1370.0099
LYS 1380.0124
LYS 1390.0134
HIS 1400.0160
GLY 1410.0171
VAL 1420.0096
TYR 1430.0071
ASN 1440.0040
PRO 1450.0021
ASN 1460.0041
LYS 1470.0039
ILE 1480.0032
PHE 1490.0034
GLY 1500.0036
VAL 1510.0032
THR 1520.0037
THR 1530.0037
LEU 1540.0035
ASP 1550.0048
ILE 1560.0042
VAL 1570.0028
ARG 1580.0032
ALA 1590.0042
ASN 1600.0045
THR 1610.0043
PHE 1620.0052
VAL 1630.0048
ALA 1640.0043
GLU 1650.0039
LEU 1660.0032
LYS 1670.0079
GLY 1680.0087
LEU 1690.0071
ASP 1700.0063
PRO 1710.0054
ALA 1720.0052
ARG 1730.0058
VAL 1740.0061
ASN 1750.0113
VAL 1760.0134
PRO 1770.0192
VAL 1780.0122
ILE 1790.0109
GLY 1800.0097
GLY 1810.0117
HIS 1820.0045
ALA 1830.0040
GLY 1840.0083
LYS 1850.0115
THR 1860.0112
ILE 1870.0112
ILE 1880.0098
PRO 1890.0097
LEU 1900.0181
ILE 1910.0150
SER 1920.0204
GLN 1930.0261
CYS 1940.0250
THR 1950.0182
PRO 1960.0189
LYS 1970.0291
VAL 1980.0236
ASP 1990.0125
PHE 2000.0101
PRO 2010.0202
GLN 2020.0173
ASP 2030.0136
GLN 2040.0115
LEU 2050.0097
THR 2060.0092
ALA 2070.0094
LEU 2080.0097
THR 2090.0106
GLY 2100.0078
ARG 2110.0078
ILE 2120.0078
GLN 2130.0078
GLU 2140.0054
ALA 2150.0098
GLY 2160.0160
THR 2170.0127
GLU 2180.0165
VAL 2190.0182
VAL 2200.0212
LYS 2210.0184
ALA 2220.0215
LYS 2230.0220
ALA 2240.0208
GLY 2250.0231
ALA 2260.0251
GLY 2270.0235
SER 2280.0207
ALA 2290.0212
THR 2300.0066
LEU 2310.0068
SER 2320.0067
MET 2330.0064
MET 2330.0064
ALA 2340.0043
TYR 2350.0044
ALA 2360.0041
GLY 2370.0046
ALA 2380.0044
ARG 2390.0044
PHE 2400.0054
VAL 2410.0061
PHE 2420.0082
SER 2430.0076
LEU 2440.0086
VAL 2450.0095
ASP 2460.0110
ALA 2470.0083
MET 2480.0128
ASN 2490.0161
GLY 2500.0140
LYS 2510.0189
GLU 2520.0214
GLY 2530.0220
VAL 2540.0028
VAL 2550.0026
GLU 2560.0028
CYS 2570.0028
SER 2580.0033
PHE 2590.0025
VAL 2600.0032
LYS 2610.0039
SER 2620.0058
GLN 2630.0062
GLU 2640.0061
THR 2650.0055
GLU 2660.0043
CYS 2670.0032
THR 2680.0036
TYR 2690.0031
PHE 2700.0055
SER 2710.0063
THR 2720.0068
PRO 2730.0080
LEU 2740.0042
LEU 2750.0044
LEU 2760.0030
GLY 2770.0049
LYS 2780.0092
LYS 2790.0098
GLY 2800.0068
ILE 2810.0045
GLU 2820.0073
LYS 2830.0048
ASN 2840.0038
LEU 2850.0065
GLY 2860.0210
ILE 2870.0158
GLY 2880.0219
LYS 2890.0240
VAL 2900.0301
SER 2910.0294
SER 2920.0271
PHE 2930.0221
GLU 2940.0057
GLU 2950.0060
LYS 2960.0088
MET 2970.0118
ILE 2980.0089
SER 2990.0139
ASP 3000.0144
ALA 3010.0114
ILE 3020.0045
PRO 3030.0037
GLU 3040.0051
LEU 3050.0035
LYS 3060.0044
ALA 3070.0056
SER 3080.0043
ILE 3090.0060
LYS 3100.0123
LYS 3110.0108
GLY 3120.0091
GLU 3130.0111
ASP 3140.0206
PHE 3150.0113
VAL 3160.0092
LYS 3170.0155
THR 3180.0115
LEU 3190.0075

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.