CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0332
ASN 60.0166
ALA 70.0145
LYS 80.0145
VAL 90.0119
ALA 100.0124
VAL 110.0106
LEU 120.0115
GLY 130.0107
ALA 140.0088
SER 150.0083
GLY 160.0081
GLY 170.0065
ILE 180.0055
GLY 190.0065
GLN 200.0058
PRO 210.0046
LEU 220.0058
SER 230.0067
LEU 240.0057
LEU 250.0056
LEU 260.0075
LYS 270.0067
ASN 280.0060
SER 290.0076
PRO 300.0104
LEU 310.0113
VAL 320.0110
SER 330.0127
ARG 340.0129
LEU 350.0109
THR 360.0120
LEU 370.0108
TYR 380.0124
ASP 390.0127
ILE 400.0150
ALA 410.0128
HIS 420.0094
THR 430.0087
PRO 440.0065
GLY 450.0045
VAL 460.0056
ALA 470.0047
ALA 480.0026
ASP 490.0027
LEU 500.0035
SER 510.0010
HIS 520.0006
ILE 530.0025
GLU 540.0053
THR 550.0058
LYS 560.0065
ALA 570.0085
ALA 580.0106
VAL 590.0095
LYS 600.0106
GLY 610.0104
TYR 620.0140
LEU 630.0149
GLY 640.0173
PRO 650.0192
GLU 660.0213
GLN 670.0189
LEU 680.0179
PRO 690.0198
ASP 700.0195
CYS 710.0164
LEU 720.0167
LYS 730.0192
GLY 740.0189
CYS 750.0161
ASP 760.0152
VAL 770.0124
VAL 780.0118
VAL 790.0094
ILE 800.0093
PRO 810.0081
ALA 820.0119
GLY 830.0120
VAL 840.0141
PRO 850.0129
ARG 860.0151
LYS 870.0173
PRO 880.0173
GLY 890.0200
MET 900.0191
THR 910.0168
ARG 920.0135
ASP 930.0152
ASP 940.0180
LEU 950.0160
PHE 960.0150
ASN 970.0183
THR 980.0184
ASN 990.0147
ALA 1000.0139
THR 1010.0170
THR 1010.0170
ILE 1020.0161
VAL 1030.0129
ALA 1040.0141
THR 1050.0173
LEU 1060.0155
THR 1070.0140
ALA 1080.0168
ALA 1090.0183
CYS 1100.0162
ALA 1110.0171
GLN 1120.0203
HIS 1130.0204
CYS 1140.0185
PRO 1150.0173
GLU 1160.0172
ALA 1170.0150
MET 1180.0119
MET 1180.0120
ILE 1190.0100
CYS 1200.0071
VAL 1210.0062
ILE 1220.0052
ALA 1230.0083
ASN 1240.0086
PRO 1250.0091
VAL 1260.0059
ASN 1270.0066
SER 1280.0084
THR 1290.0081
ILE 1300.0050
PRO 1310.0056
ILE 1320.0094
THR 1330.0093
ALA 1340.0078
GLU 1350.0098
VAL 1360.0132
PHE 1370.0130
LYS 1380.0125
LYS 1390.0155
HIS 1400.0178
GLY 1410.0169
VAL 1420.0161
TYR 1430.0123
ASN 1440.0120
PRO 1450.0086
ASN 1460.0106
LYS 1470.0106
ILE 1480.0076
PHE 1490.0049
GLY 1500.0018
VAL 1510.0017
THR 1520.0023
THR 1530.0037
LEU 1540.0022
ASP 1550.0056
ILE 1560.0075
VAL 1570.0060
ARG 1580.0062
ALA 1590.0103
ASN 1600.0108
THR 1610.0082
PHE 1620.0116
VAL 1630.0154
ALA 1640.0147
GLU 1650.0133
LEU 1660.0184
LYS 1670.0209
GLY 1680.0185
LEU 1690.0184
ASP 1700.0154
PRO 1710.0121
ALA 1720.0149
ARG 1730.0195
VAL 1740.0170
ASN 1750.0165
VAL 1760.0157
PRO 1770.0153
VAL 1780.0118
ILE 1790.0113
GLY 1800.0103
GLY 1810.0078
HIS 1820.0071
ALA 1830.0112
GLY 1840.0147
LYS 1850.0167
THR 1860.0133
ILE 1870.0118
ILE 1880.0146
PRO 1890.0153
LEU 1900.0191
ILE 1910.0213
SER 1920.0255
GLN 1930.0236
CYS 1940.0219
THR 1950.0238
PRO 1960.0258
LYS 1970.0282
VAL 1980.0270
ASP 1990.0302
PHE 2000.0290
PRO 2010.0327
GLN 2020.0319
ASP 2030.0316
GLN 2040.0274
LEU 2050.0255
THR 2060.0254
ALA 2070.0234
LEU 2080.0193
THR 2090.0184
GLY 2100.0182
ARG 2110.0150
ILE 2120.0120
GLN 2130.0132
GLU 2140.0131
ALA 2150.0096
GLY 2160.0088
THR 2170.0127
GLU 2180.0105
VAL 2190.0074
VAL 2200.0109
LYS 2210.0127
ALA 2220.0079
LYS 2230.0091
ALA 2240.0126
GLY 2250.0151
ALA 2260.0138
GLY 2270.0125
SER 2280.0088
ALA 2290.0043
THR 2300.0046
LEU 2310.0042
SER 2320.0022
MET 2330.0026
MET 2330.0026
ALA 2340.0046
TYR 2350.0043
ALA 2360.0031
GLY 2370.0039
ALA 2380.0068
ARG 2390.0069
PHE 2400.0063
VAL 2410.0084
PHE 2420.0094
SER 2430.0103
LEU 2440.0109
VAL 2450.0131
ASP 2460.0147
ALA 2470.0155
MET 2480.0166
ASN 2490.0189
GLY 2500.0210
LYS 2510.0198
GLU 2520.0204
GLY 2530.0187
VAL 2540.0150
VAL 2550.0130
GLU 2560.0096
CYS 2570.0078
SER 2580.0048
PHE 2590.0026
VAL 2600.0031
LYS 2610.0031
SER 2620.0058
GLN 2630.0081
GLU 2640.0113
THR 2650.0113
GLU 2660.0104
CYS 2670.0079
THR 2680.0039
TYR 2690.0031
PHE 2700.0058
SER 2710.0068
THR 2720.0102
PRO 2730.0121
LEU 2740.0112
LEU 2750.0145
LEU 2760.0140
GLY 2770.0170
LYS 2780.0191
LYS 2790.0171
GLY 2800.0133
ILE 2810.0121
GLU 2820.0159
LYS 2830.0149
ASN 2840.0123
LEU 2850.0154
GLY 2860.0156
ILE 2870.0166
GLY 2880.0215
LYS 2890.0258
VAL 2900.0256
SER 2910.0285
SER 2920.0302
PHE 2930.0278
GLU 2940.0236
GLU 2950.0244
LYS 2960.0257
MET 2970.0218
ILE 2980.0187
SER 2990.0212
ASP 3000.0217
ALA 3010.0172
ILE 3020.0150
PRO 3030.0167
GLU 3040.0157
LEU 3050.0114
LYS 3060.0111
ALA 3070.0138
SER 3080.0116
ILE 3090.0083
LYS 3100.0106
LYS 3110.0132
GLY 3120.0108
GLU 3130.0100
ASP 3140.0136
PHE 3150.0153
VAL 3160.0143
LYS 3170.0156
THR 3180.0195
LEU 3190.0201
ASN 60.0165
ALA 70.0143
LYS 80.0143
VAL 90.0119
ALA 100.0124
VAL 110.0105
LEU 120.0116
GLY 130.0107
ALA 140.0089
SER 150.0084
GLY 160.0082
GLY 170.0065
ILE 180.0055
GLY 190.0067
GLN 200.0059
PRO 210.0046
LEU 220.0058
SER 230.0067
LEU 240.0058
LEU 250.0056
LEU 260.0075
LYS 270.0068
ASN 280.0061
SER 290.0077
PRO 300.0105
LEU 310.0114
VAL 320.0112
SER 330.0131
ARG 340.0130
LEU 350.0111
THR 360.0121
LEU 370.0109
TYR 380.0125
ASP 390.0128
ILE 400.0153
ALA 410.0132
HIS 420.0097
THR 430.0089
PRO 440.0067
GLY 450.0046
VAL 460.0057
ALA 470.0048
ALA 480.0026
ASP 490.0027
LEU 500.0036
SER 510.0011
HIS 520.0006
ILE 530.0028
GLU 540.0053
THR 550.0060
LYS 560.0065
ALA 570.0086
ALA 580.0105
VAL 590.0095
LYS 600.0106
GLY 610.0103
TYR 620.0143
LEU 630.0152
GLY 640.0176
PRO 650.0195
GLU 660.0217
GLN 670.0193
LEU 680.0180
PRO 690.0200
ASP 700.0196
CYS 710.0165
LEU 720.0167
LYS 730.0193
GLY 740.0189
CYS 750.0161
ASP 760.0151
VAL 770.0124
VAL 780.0117
VAL 790.0092
ILE 800.0092
PRO 810.0080
ALA 820.0117
GLY 830.0120
VAL 840.0140
PRO 850.0128
ARG 860.0148
LYS 870.0170
PRO 880.0171
GLY 890.0197
MET 900.0189
THR 910.0168
ARG 920.0136
ASP 930.0153
ASP 940.0180
LEU 950.0158
PHE 960.0150
ASN 970.0181
THR 980.0182
ASN 990.0144
ALA 1000.0135
THR 1010.0167
ILE 1020.0158
VAL 1030.0128
ALA 1040.0141
THR 1050.0171
LEU 1060.0154
THR 1070.0139
ALA 1080.0167
ALA 1090.0183
CYS 1100.0162
ALA 1110.0171
GLN 1120.0203
HIS 1130.0204
CYS 1140.0185
PRO 1150.0172
GLU 1160.0171
ALA 1170.0149
MET 1180.0119
ILE 1190.0100
CYS 1200.0071
VAL 1210.0061
ILE 1220.0051
ALA 1230.0081
ASN 1240.0086
PRO 1250.0090
VAL 1260.0058
ASN 1270.0065
SER 1280.0082
THR 1290.0079
ILE 1300.0048
PRO 1310.0054
ILE 1320.0092
THR 1330.0092
ALA 1340.0077
GLU 1350.0097
VAL 1360.0130
PHE 1370.0130
LYS 1380.0124
LYS 1390.0153
HIS 1400.0177
GLY 1410.0167
VAL 1420.0160
TYR 1430.0122
ASN 1440.0120
PRO 1450.0086
ASN 1460.0104
LYS 1470.0105
ILE 1480.0075
PHE 1490.0048
GLY 1500.0016
VAL 1510.0017
THR 1520.0024
THR 1530.0037
LEU 1540.0022
ASP 1550.0057
ILE 1560.0076
VAL 1570.0060
ARG 1580.0062
ALA 1590.0103
ASN 1600.0107
THR 1610.0080
PHE 1620.0117
VAL 1630.0155
ALA 1640.0144
GLU 1650.0131
LEU 1660.0183
LYS 1670.0207
GLY 1680.0183
LEU 1690.0182
ASP 1700.0148
PRO 1710.0118
ALA 1720.0147
ARG 1730.0192
VAL 1740.0169
ASN 1750.0165
VAL 1760.0158
PRO 1770.0154
VAL 1780.0119
ILE 1790.0114
GLY 1800.0106
GLY 1810.0080
HIS 1820.0072
ALA 1830.0113
GLY 1840.0149
LYS 1850.0168
THR 1860.0136
ILE 1870.0120
ILE 1880.0149
PRO 1890.0156
LEU 1900.0194
ILE 1910.0216
SER 1920.0257
GLN 1930.0238
CYS 1940.0221
THR 1950.0238
PRO 1960.0259
LYS 1970.0285
VAL 1980.0274
ASP 1990.0307
PHE 2000.0294
PRO 2010.0332
GLN 2020.0323
ASP 2030.0319
GLN 2040.0275
LEU 2050.0258
THR 2060.0257
ALA 2070.0238
LEU 2080.0196
THR 2090.0187
GLY 2100.0185
ARG 2110.0153
ILE 2120.0122
GLN 2130.0135
GLU 2140.0133
ALA 2150.0098
GLY 2160.0089
THR 2170.0130
GLU 2180.0103
VAL 2190.0075
VAL 2200.0110
LYS 2210.0124
ALA 2220.0078
LYS 2230.0090
ALA 2240.0125
GLY 2250.0149
ALA 2260.0135
GLY 2270.0123
SER 2280.0089
ALA 2290.0045
THR 2300.0046
LEU 2310.0042
SER 2320.0021
MET 2330.0026
MET 2330.0026
ALA 2340.0045
TYR 2350.0042
ALA 2360.0029
GLY 2370.0039
ALA 2380.0067
ARG 2390.0068
PHE 2400.0062
VAL 2410.0082
PHE 2420.0094
SER 2430.0103
LEU 2440.0110
VAL 2450.0131
ASP 2460.0149
ALA 2470.0156
MET 2480.0167
ASN 2490.0190
GLY 2500.0211
LYS 2510.0199
GLU 2520.0206
GLY 2530.0190
VAL 2540.0152
VAL 2550.0132
GLU 2560.0098
CYS 2570.0080
SER 2580.0050
PHE 2590.0027
VAL 2600.0032
LYS 2610.0032
SER 2620.0060
GLN 2630.0084
GLU 2640.0116
THR 2650.0116
GLU 2660.0105
CYS 2670.0082
THR 2680.0042
TYR 2690.0033
PHE 2700.0061
SER 2710.0070
THR 2720.0103
PRO 2730.0123
LEU 2740.0115
LEU 2750.0147
LEU 2760.0142
GLY 2770.0172
LYS 2780.0192
LYS 2790.0171
GLY 2800.0134
ILE 2810.0122
GLU 2820.0160
LYS 2830.0152
ASN 2840.0126
LEU 2850.0156
GLY 2860.0152
ILE 2870.0171
GLY 2880.0220
LYS 2890.0263
VAL 2900.0261
SER 2910.0290
SER 2920.0306
PHE 2930.0283
GLU 2940.0239
GLU 2950.0249
LYS 2960.0260
MET 2970.0220
ILE 2980.0187
SER 2990.0213
ASP 3000.0220
ALA 3010.0174
ILE 3020.0152
PRO 3030.0169
GLU 3040.0157
LEU 3050.0114
LYS 3060.0110
ALA 3070.0137
SER 3080.0114
ILE 3090.0082
LYS 3100.0105
LYS 3110.0130
GLY 3120.0107
GLU 3130.0100
ASP 3140.0136
PHE 3150.0151
VAL 3160.0141
LYS 3170.0156
THR 3180.0195
LEU 3190.0202

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.