CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 74  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0528
ASN 60.0090
ALA 70.0113
LYS 80.0137
VAL 90.0136
ALA 100.0121
VAL 110.0102
LEU 120.0104
GLY 130.0088
ALA 140.0079
SER 150.0093
GLY 160.0109
GLY 170.0132
ILE 180.0081
GLY 190.0052
GLN 200.0081
PRO 210.0106
LEU 220.0064
SER 230.0050
LEU 240.0070
LEU 250.0080
LEU 260.0065
LYS 270.0053
ASN 280.0098
SER 290.0095
PRO 300.0086
LEU 310.0076
VAL 320.0040
SER 330.0041
ARG 340.0094
LEU 350.0053
THR 360.0071
LEU 370.0036
TYR 380.0054
ASP 390.0072
ILE 400.0097
ALA 410.0145
HIS 420.0200
THR 430.0130
PRO 440.0128
GLY 450.0158
VAL 460.0132
ALA 470.0123
ALA 480.0104
ASP 490.0102
LEU 500.0099
SER 510.0092
HIS 520.0092
ILE 530.0088
GLU 540.0083
THR 550.0077
LYS 560.0077
ALA 570.0072
ALA 580.0089
VAL 590.0058
LYS 600.0085
GLY 610.0060
TYR 620.0014
LEU 630.0067
GLY 640.0083
PRO 650.0046
GLU 660.0037
GLN 670.0030
LEU 680.0087
PRO 690.0125
ASP 700.0126
CYS 710.0125
LEU 720.0166
LYS 730.0189
GLY 740.0174
CYS 750.0159
ASP 760.0146
VAL 770.0150
VAL 780.0130
VAL 790.0140
ILE 800.0169
PRO 810.0180
ALA 820.0245
GLY 830.0174
VAL 840.0143
PRO 850.0161
ARG 860.0171
LYS 870.0188
PRO 880.0189
GLY 890.0184
MET 900.0209
THR 910.0230
ARG 920.0120
ASP 930.0189
ASP 940.0310
LEU 950.0176
PHE 960.0195
ASN 970.0390
THR 980.0316
ASN 990.0220
ALA 1000.0156
THR 1010.0287
THR 1010.0286
ILE 1020.0242
VAL 1030.0183
ALA 1040.0112
THR 1050.0182
LEU 1060.0180
THR 1070.0090
ALA 1080.0129
ALA 1090.0123
CYS 1100.0122
ALA 1110.0203
GLN 1120.0287
HIS 1130.0215
CYS 1140.0246
PRO 1150.0193
GLU 1160.0175
ALA 1170.0112
MET 1180.0061
MET 1180.0061
ILE 1190.0080
CYS 1200.0104
VAL 1210.0125
ILE 1220.0139
ALA 1230.0106
ASN 1240.0073
PRO 1250.0058
VAL 1260.0070
ASN 1270.0060
SER 1280.0051
THR 1290.0095
ILE 1300.0098
PRO 1310.0093
ILE 1320.0096
THR 1330.0108
ALA 1340.0147
GLU 1350.0125
VAL 1360.0086
PHE 1370.0117
LYS 1380.0264
LYS 1390.0240
HIS 1400.0328
GLY 1410.0403
VAL 1420.0228
TYR 1430.0187
ASN 1440.0207
PRO 1450.0212
ASN 1460.0110
LYS 1470.0069
ILE 1480.0074
PHE 1490.0112
GLY 1500.0100
VAL 1510.0070
THR 1520.0049
THR 1530.0038
LEU 1540.0019
ASP 1550.0044
ILE 1560.0046
VAL 1570.0031
ARG 1580.0048
ALA 1590.0067
ASN 1600.0060
THR 1610.0071
PHE 1620.0092
VAL 1630.0086
ALA 1640.0076
GLU 1650.0087
LEU 1660.0063
LYS 1670.0043
GLY 1680.0063
LEU 1690.0079
ASP 1700.0098
PRO 1710.0062
ALA 1720.0050
ARG 1730.0086
VAL 1740.0067
ASN 1750.0058
VAL 1760.0050
PRO 1770.0049
VAL 1780.0048
ILE 1790.0039
GLY 1800.0044
GLY 1810.0064
HIS 1820.0117
ALA 1830.0147
GLY 1840.0156
LYS 1850.0156
THR 1860.0108
ILE 1870.0096
ILE 1880.0079
PRO 1890.0067
LEU 1900.0074
ILE 1910.0080
SER 1920.0084
GLN 1930.0094
CYS 1940.0018
THR 1950.0048
PRO 1960.0055
LYS 1970.0022
VAL 1980.0059
ASP 1990.0118
PHE 2000.0076
PRO 2010.0127
GLN 2020.0125
ASP 2030.0128
GLN 2040.0071
LEU 2050.0042
THR 2060.0097
ALA 2070.0114
LEU 2080.0094
THR 2090.0090
GLY 2100.0151
ARG 2110.0126
ILE 2120.0088
GLN 2130.0104
GLU 2140.0169
ALA 2150.0083
GLY 2160.0102
THR 2170.0156
GLU 2180.0215
VAL 2190.0091
VAL 2200.0077
LYS 2210.0174
ALA 2220.0147
LYS 2230.0089
ALA 2240.0041
GLY 2250.0068
ALA 2260.0120
GLY 2270.0108
SER 2280.0039
ALA 2290.0050
THR 2300.0056
LEU 2310.0078
SER 2320.0073
MET 2330.0042
MET 2330.0042
ALA 2340.0055
TYR 2350.0049
ALA 2360.0038
GLY 2370.0029
ALA 2380.0051
ARG 2390.0049
PHE 2400.0053
VAL 2410.0071
PHE 2420.0073
SER 2430.0088
LEU 2440.0084
VAL 2450.0068
ASP 2460.0069
ALA 2470.0067
MET 2480.0031
ASN 2490.0028
GLY 2500.0080
LYS 2510.0126
GLU 2520.0059
GLY 2530.0123
VAL 2540.0086
VAL 2550.0076
GLU 2560.0060
CYS 2570.0057
SER 2580.0065
PHE 2590.0053
VAL 2600.0033
LYS 2610.0043
SER 2620.0042
GLN 2630.0039
GLU 2640.0044
THR 2650.0036
GLU 2660.0070
CYS 2670.0028
THR 2680.0036
TYR 2690.0046
PHE 2700.0017
SER 2710.0015
THR 2720.0024
PRO 2730.0037
LEU 2740.0061
LEU 2750.0072
LEU 2760.0044
GLY 2770.0045
LYS 2780.0026
LYS 2790.0040
GLY 2800.0048
ILE 2810.0056
GLU 2820.0066
LYS 2830.0093
ASN 2840.0076
LEU 2850.0108
GLY 2860.0022
ILE 2870.0042
GLY 2880.0239
LYS 2890.0398
VAL 2900.0115
SER 2910.0111
SER 2920.0093
PHE 2930.0078
GLU 2940.0120
GLU 2950.0137
LYS 2960.0175
MET 2970.0129
ILE 2980.0058
SER 2990.0121
ASP 3000.0136
ALA 3010.0092
ILE 3020.0047
PRO 3030.0076
GLU 3040.0089
LEU 3050.0079
LYS 3060.0083
ALA 3070.0077
SER 3080.0043
ILE 3090.0045
LYS 3100.0073
LYS 3110.0076
GLY 3120.0078
GLU 3130.0086
ASP 3140.0057
PHE 3150.0117
VAL 3160.0207
LYS 3170.0211
THR 3180.0384
LEU 3190.0369
ASN 60.0155
ALA 70.0152
LYS 80.0170
VAL 90.0156
ALA 100.0110
VAL 110.0096
LEU 120.0100
GLY 130.0085
ALA 140.0073
SER 150.0059
GLY 160.0063
GLY 170.0063
ILE 180.0060
GLY 190.0034
GLN 200.0045
PRO 210.0074
LEU 220.0046
SER 230.0027
LEU 240.0047
LEU 250.0058
LEU 260.0029
LYS 270.0028
ASN 280.0056
SER 290.0037
PRO 300.0058
LEU 310.0053
VAL 320.0074
SER 330.0122
ARG 340.0117
LEU 350.0095
THR 360.0100
LEU 370.0084
TYR 380.0085
ASP 390.0103
ILE 400.0124
ALA 410.0137
HIS 420.0129
THR 430.0109
PRO 440.0111
GLY 450.0127
VAL 460.0104
ALA 470.0110
ALA 480.0104
ASP 490.0101
LEU 500.0085
SER 510.0082
HIS 520.0077
ILE 530.0068
GLU 540.0040
THR 550.0039
LYS 560.0038
ALA 570.0035
ALA 580.0088
VAL 590.0056
LYS 600.0070
GLY 610.0049
TYR 620.0073
LEU 630.0107
GLY 640.0125
PRO 650.0099
GLU 660.0117
GLN 670.0048
LEU 680.0056
PRO 690.0064
ASP 700.0088
CYS 710.0112
LEU 720.0112
LYS 730.0121
GLY 740.0175
CYS 750.0166
ASP 760.0159
VAL 770.0156
VAL 780.0111
VAL 790.0115
ILE 800.0156
PRO 810.0174
ALA 820.0260
GLY 830.0211
VAL 840.0263
PRO 850.0364
ARG 860.0313
LYS 870.0194
PRO 880.0196
GLY 890.0276
MET 900.0405
THR 910.0472
ARG 920.0327
ASP 930.0342
ASP 940.0473
LEU 950.0170
PHE 960.0200
ASN 970.0528
THR 980.0418
ASN 990.0279
ALA 1000.0201
THR 1010.0390
ILE 1020.0313
VAL 1030.0244
ALA 1040.0152
THR 1050.0227
LEU 1060.0143
THR 1070.0128
ALA 1080.0046
ALA 1090.0044
CYS 1100.0049
ALA 1110.0111
GLN 1120.0120
HIS 1130.0080
CYS 1140.0094
PRO 1150.0088
GLU 1160.0078
ALA 1170.0100
MET 1180.0073
ILE 1190.0087
CYS 1200.0104
VAL 1210.0122
ILE 1220.0198
ALA 1230.0155
ASN 1240.0135
PRO 1250.0128
VAL 1260.0106
ASN 1270.0119
SER 1280.0070
THR 1290.0092
ILE 1300.0049
PRO 1310.0051
ILE 1320.0071
THR 1330.0094
ALA 1340.0136
GLU 1350.0101
VAL 1360.0068
PHE 1370.0119
LYS 1380.0243
LYS 1390.0212
HIS 1400.0263
GLY 1410.0327
VAL 1420.0215
TYR 1430.0210
ASN 1440.0222
PRO 1450.0224
ASN 1460.0097
LYS 1470.0052
ILE 1480.0063
PHE 1490.0099
GLY 1500.0103
VAL 1510.0084
THR 1520.0078
THR 1530.0071
LEU 1540.0035
ASP 1550.0056
ILE 1560.0038
VAL 1570.0023
ARG 1580.0019
ALA 1590.0066
ASN 1600.0067
THR 1610.0090
PHE 1620.0105
VAL 1630.0108
ALA 1640.0108
GLU 1650.0134
LEU 1660.0126
LYS 1670.0121
GLY 1680.0117
LEU 1690.0111
ASP 1700.0077
PRO 1710.0074
ALA 1720.0089
ARG 1730.0098
VAL 1740.0033
ASN 1750.0038
VAL 1760.0035
PRO 1770.0047
VAL 1780.0045
ILE 1790.0052
GLY 1800.0080
GLY 1810.0121
HIS 1820.0214
ALA 1830.0237
GLY 1840.0229
LYS 1850.0234
THR 1860.0173
ILE 1870.0120
ILE 1880.0060
PRO 1890.0025
LEU 1900.0079
ILE 1910.0098
SER 1920.0098
GLN 1930.0121
CYS 1940.0034
THR 1950.0042
PRO 1960.0065
LYS 1970.0044
VAL 1980.0084
ASP 1990.0123
PHE 2000.0131
PRO 2010.0220
GLN 2020.0188
ASP 2030.0195
GLN 2040.0112
LEU 2050.0111
THR 2060.0104
ALA 2070.0077
LEU 2080.0089
THR 2090.0137
GLY 2100.0187
ARG 2110.0143
ILE 2120.0077
GLN 2130.0126
GLU 2140.0260
ALA 2150.0103
GLY 2160.0245
THR 2170.0264
GLU 2180.0195
VAL 2190.0087
VAL 2200.0149
LYS 2210.0127
ALA 2220.0113
LYS 2230.0140
ALA 2240.0126
GLY 2250.0167
ALA 2260.0238
GLY 2270.0272
SER 2280.0248
ALA 2290.0209
THR 2300.0069
LEU 2310.0081
SER 2320.0089
MET 2330.0074
MET 2330.0074
ALA 2340.0061
TYR 2350.0072
ALA 2360.0058
GLY 2370.0050
ALA 2380.0045
ARG 2390.0044
PHE 2400.0047
VAL 2410.0053
PHE 2420.0035
SER 2430.0051
LEU 2440.0068
VAL 2450.0056
ASP 2460.0038
ALA 2470.0053
MET 2480.0053
ASN 2490.0026
GLY 2500.0020
LYS 2510.0050
GLU 2520.0061
GLY 2530.0082
VAL 2540.0070
VAL 2550.0063
GLU 2560.0055
CYS 2570.0050
SER 2580.0054
PHE 2590.0041
VAL 2600.0063
LYS 2610.0121
SER 2620.0203
GLN 2630.0264
GLU 2640.0258
THR 2650.0242
GLU 2660.0166
CYS 2670.0105
THR 2680.0071
TYR 2690.0075
PHE 2700.0036
SER 2710.0039
THR 2720.0026
PRO 2730.0041
LEU 2740.0048
LEU 2750.0058
LEU 2760.0037
GLY 2770.0044
LYS 2780.0026
LYS 2790.0054
GLY 2800.0054
ILE 2810.0051
GLU 2820.0126
LYS 2830.0109
ASN 2840.0094
LEU 2850.0086
GLY 2860.0077
ILE 2870.0110
GLY 2880.0198
LYS 2890.0311
VAL 2900.0209
SER 2910.0131
SER 2920.0064
PHE 2930.0030
GLU 2940.0050
GLU 2950.0140
LYS 2960.0155
MET 2970.0110
ILE 2980.0110
SER 2990.0193
ASP 3000.0189
ALA 3010.0134
ILE 3020.0095
PRO 3030.0116
GLU 3040.0122
LEU 3050.0101
LYS 3060.0093
ALA 3070.0105
SER 3080.0098
ILE 3090.0081
LYS 3100.0114
LYS 3110.0060
GLY 3120.0016
GLU 3130.0091
ASP 3140.0150
PHE 3150.0073
VAL 3160.0181
LYS 3170.0211
THR 3180.0246
LEU 3190.0299

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.