CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 76  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0711
ASN 60.0092
ALA 70.0083
LYS 80.0093
VAL 90.0098
ALA 100.0079
VAL 110.0073
LEU 120.0055
GLY 130.0051
ALA 140.0101
SER 150.0106
GLY 160.0072
GLY 170.0066
ILE 180.0062
GLY 190.0081
GLN 200.0083
PRO 210.0075
LEU 220.0081
SER 230.0098
LEU 240.0072
LEU 250.0072
LEU 260.0100
LYS 270.0089
ASN 280.0055
SER 290.0068
PRO 300.0044
LEU 310.0096
VAL 320.0106
SER 330.0109
ARG 340.0164
LEU 350.0147
THR 360.0126
LEU 370.0112
TYR 380.0084
ASP 390.0063
ILE 400.0094
ALA 410.0155
HIS 420.0133
THR 430.0133
PRO 440.0143
GLY 450.0139
VAL 460.0109
ALA 470.0115
ALA 480.0099
ASP 490.0066
LEU 500.0100
SER 510.0107
HIS 520.0094
ILE 530.0068
GLU 540.0118
THR 550.0085
LYS 560.0096
ALA 570.0129
ALA 580.0207
VAL 590.0158
LYS 600.0181
GLY 610.0150
TYR 620.0092
LEU 630.0091
GLY 640.0108
PRO 650.0136
GLU 660.0154
GLN 670.0058
LEU 680.0092
PRO 690.0201
ASP 700.0149
CYS 710.0110
LEU 720.0108
LYS 730.0157
GLY 740.0089
CYS 750.0039
ASP 760.0009
VAL 770.0034
VAL 780.0030
VAL 790.0031
ILE 800.0032
PRO 810.0043
ALA 820.0069
GLY 830.0088
VAL 840.0193
PRO 850.0295
ARG 860.0248
LYS 870.0221
PRO 880.0130
GLY 890.0218
MET 900.0054
THR 910.0017
ARG 920.0067
ASP 930.0064
ASP 940.0073
LEU 950.0079
PHE 960.0033
ASN 970.0031
THR 980.0085
ASN 990.0037
ALA 1000.0052
THR 1010.0079
THR 1010.0079
ILE 1020.0053
VAL 1030.0048
ALA 1040.0067
THR 1050.0068
LEU 1060.0033
THR 1070.0053
ALA 1080.0036
ALA 1090.0045
CYS 1100.0056
ALA 1110.0052
GLN 1120.0059
HIS 1130.0112
CYS 1140.0097
PRO 1150.0140
GLU 1160.0212
ALA 1170.0120
MET 1180.0096
MET 1180.0096
ILE 1190.0065
CYS 1200.0052
VAL 1210.0038
ILE 1220.0035
ALA 1230.0022
ASN 1240.0042
PRO 1250.0054
VAL 1260.0039
ASN 1270.0050
SER 1280.0046
THR 1290.0031
ILE 1300.0049
PRO 1310.0064
ILE 1320.0079
THR 1330.0077
ALA 1340.0114
GLU 1350.0123
VAL 1360.0096
PHE 1370.0106
LYS 1380.0175
LYS 1390.0102
HIS 1400.0057
GLY 1410.0157
VAL 1420.0226
TYR 1430.0227
ASN 1440.0257
PRO 1450.0246
ASN 1460.0167
LYS 1470.0154
ILE 1480.0097
PHE 1490.0051
GLY 1500.0046
VAL 1510.0060
THR 1520.0076
THR 1530.0082
LEU 1540.0072
ASP 1550.0069
ILE 1560.0080
VAL 1570.0081
ARG 1580.0054
ALA 1590.0057
ASN 1600.0074
THR 1610.0054
PHE 1620.0083
VAL 1630.0101
ALA 1640.0076
GLU 1650.0100
LEU 1660.0118
LYS 1670.0162
GLY 1680.0149
LEU 1690.0091
ASP 1700.0290
PRO 1710.0086
ALA 1720.0242
ARG 1730.0211
VAL 1740.0084
ASN 1750.0099
VAL 1760.0071
PRO 1770.0088
VAL 1780.0124
ILE 1790.0136
GLY 1800.0136
GLY 1810.0136
HIS 1820.0072
ALA 1830.0045
GLY 1840.0048
LYS 1850.0065
THR 1860.0073
ILE 1870.0067
ILE 1880.0041
PRO 1890.0061
LEU 1900.0107
ILE 1910.0102
SER 1920.0128
GLN 1930.0142
CYS 1940.0259
THR 1950.0275
PRO 1960.0284
LYS 1970.0335
VAL 1980.0279
ASP 1990.0162
PHE 2000.0172
PRO 2010.0304
GLN 2020.0318
ASP 2030.0372
GLN 2040.0264
LEU 2050.0107
THR 2060.0139
ALA 2070.0091
LEU 2080.0053
THR 2090.0092
GLY 2100.0052
ARG 2110.0041
ILE 2120.0039
GLN 2130.0061
GLU 2140.0124
ALA 2150.0133
GLY 2160.0138
THR 2170.0151
GLU 2180.0178
VAL 2190.0185
VAL 2200.0094
LYS 2210.0114
ALA 2220.0100
LYS 2230.0090
ALA 2240.0041
GLY 2250.0090
ALA 2260.0145
GLY 2270.0164
SER 2280.0177
ALA 2290.0176
THR 2300.0054
LEU 2310.0053
SER 2320.0064
MET 2330.0060
MET 2330.0060
ALA 2340.0073
TYR 2350.0071
ALA 2360.0069
GLY 2370.0072
ALA 2380.0110
ARG 2390.0104
PHE 2400.0088
VAL 2410.0106
PHE 2420.0137
SER 2430.0134
LEU 2440.0110
VAL 2450.0099
ASP 2460.0187
ALA 2470.0139
MET 2480.0124
ASN 2490.0215
GLY 2500.0428
LYS 2510.0466
GLU 2520.0335
GLY 2530.0511
VAL 2540.0212
VAL 2550.0139
GLU 2560.0074
CYS 2570.0059
SER 2580.0112
PHE 2590.0087
VAL 2600.0037
LYS 2610.0096
SER 2620.0182
GLN 2630.0265
GLU 2640.0334
THR 2650.0414
GLU 2660.0501
CYS 2670.0363
THR 2680.0258
TYR 2690.0152
PHE 2700.0184
SER 2710.0189
THR 2720.0163
PRO 2730.0164
LEU 2740.0150
LEU 2750.0191
LEU 2760.0143
GLY 2770.0153
LYS 2780.0042
LYS 2790.0057
GLY 2800.0094
ILE 2810.0167
GLU 2820.0194
LYS 2830.0174
ASN 2840.0081
LEU 2850.0208
GLY 2860.0280
ILE 2870.0216
GLY 2880.0157
LYS 2890.0331
VAL 2900.0128
SER 2910.0266
SER 2920.0323
PHE 2930.0205
GLU 2940.0106
GLU 2950.0248
LYS 2960.0331
MET 2970.0136
ILE 2980.0148
SER 2990.0340
ASP 3000.0252
ALA 3010.0086
ILE 3020.0171
PRO 3030.0143
GLU 3040.0117
LEU 3050.0152
LYS 3060.0132
ALA 3070.0077
SER 3080.0022
ILE 3090.0038
LYS 3100.0047
LYS 3110.0055
GLY 3120.0062
GLU 3130.0042
ASP 3140.0132
PHE 3150.0164
VAL 3160.0063
LYS 3170.0195
THR 3180.0711
LEU 3190.0473
ASN 60.0087
ALA 70.0040
LYS 80.0057
VAL 90.0068
ALA 100.0078
VAL 110.0076
LEU 120.0074
GLY 130.0072
ALA 140.0049
SER 150.0063
GLY 160.0076
GLY 170.0085
ILE 180.0057
GLY 190.0050
GLN 200.0051
PRO 210.0054
LEU 220.0069
SER 230.0059
LEU 240.0066
LEU 250.0065
LEU 260.0057
LYS 270.0041
ASN 280.0076
SER 290.0078
PRO 300.0122
LEU 310.0085
VAL 320.0042
SER 330.0063
ARG 340.0055
LEU 350.0061
THR 360.0076
LEU 370.0083
TYR 380.0070
ASP 390.0058
ILE 400.0045
ALA 410.0057
HIS 420.0035
THR 430.0040
PRO 440.0058
GLY 450.0047
VAL 460.0013
ALA 470.0036
ALA 480.0030
ASP 490.0036
LEU 500.0024
SER 510.0023
HIS 520.0022
ILE 530.0018
GLU 540.0047
THR 550.0040
LYS 560.0065
ALA 570.0046
ALA 580.0041
VAL 590.0048
LYS 600.0067
GLY 610.0082
TYR 620.0061
LEU 630.0066
GLY 640.0090
PRO 650.0099
GLU 660.0174
GLN 670.0091
LEU 680.0074
PRO 690.0181
ASP 700.0125
CYS 710.0114
LEU 720.0116
LYS 730.0151
GLY 740.0069
CYS 750.0068
ASP 760.0080
VAL 770.0084
VAL 780.0054
VAL 790.0054
ILE 800.0068
PRO 810.0072
ALA 820.0067
GLY 830.0087
VAL 840.0117
PRO 850.0117
ARG 860.0079
LYS 870.0060
PRO 880.0058
GLY 890.0077
MET 900.0106
THR 910.0108
ARG 920.0107
ASP 930.0110
ASP 940.0141
LEU 950.0142
PHE 960.0120
ASN 970.0147
THR 980.0138
ASN 990.0106
ALA 1000.0074
THR 1010.0072
ILE 1020.0056
VAL 1030.0029
ALA 1040.0030
THR 1050.0021
LEU 1060.0021
THR 1070.0038
ALA 1080.0058
ALA 1090.0054
CYS 1100.0059
ALA 1110.0058
GLN 1120.0043
HIS 1130.0047
CYS 1140.0102
PRO 1150.0040
GLU 1160.0085
ALA 1170.0082
MET 1180.0059
ILE 1190.0061
CYS 1200.0057
VAL 1210.0060
ILE 1220.0062
ALA 1230.0063
ASN 1240.0056
PRO 1250.0061
VAL 1260.0026
ASN 1270.0041
SER 1280.0051
THR 1290.0043
ILE 1300.0040
PRO 1310.0037
ILE 1320.0039
THR 1330.0041
ALA 1340.0034
GLU 1350.0062
VAL 1360.0059
PHE 1370.0031
LYS 1380.0094
LYS 1390.0112
HIS 1400.0044
GLY 1410.0074
VAL 1420.0065
TYR 1430.0062
ASN 1440.0084
PRO 1450.0075
ASN 1460.0076
LYS 1470.0076
ILE 1480.0076
PHE 1490.0081
GLY 1500.0079
VAL 1510.0051
THR 1520.0051
THR 1530.0036
LEU 1540.0052
ASP 1550.0064
ILE 1560.0081
VAL 1570.0080
ARG 1580.0103
ALA 1590.0129
ASN 1600.0118
THR 1610.0111
PHE 1620.0141
VAL 1630.0124
ALA 1640.0085
GLU 1650.0113
LEU 1660.0136
LYS 1670.0075
GLY 1680.0096
LEU 1690.0067
ASP 1700.0115
PRO 1710.0134
ALA 1720.0198
ARG 1730.0198
VAL 1740.0159
ASN 1750.0126
VAL 1760.0090
PRO 1770.0096
VAL 1780.0082
ILE 1790.0081
GLY 1800.0084
GLY 1810.0081
HIS 1820.0042
ALA 1830.0098
GLY 1840.0142
LYS 1850.0165
THR 1860.0084
ILE 1870.0103
ILE 1880.0091
PRO 1890.0122
LEU 1900.0124
ILE 1910.0139
SER 1920.0135
GLN 1930.0119
CYS 1940.0084
THR 1950.0159
PRO 1960.0174
LYS 1970.0085
VAL 1980.0118
ASP 1990.0169
PHE 2000.0074
PRO 2010.0102
GLN 2020.0251
ASP 2030.0226
GLN 2040.0121
LEU 2050.0104
THR 2060.0140
ALA 2070.0126
LEU 2080.0109
THR 2090.0111
GLY 2100.0119
ARG 2110.0105
ILE 2120.0115
GLN 2130.0108
GLU 2140.0062
ALA 2150.0064
GLY 2160.0041
THR 2170.0070
GLU 2180.0072
VAL 2190.0044
VAL 2200.0050
LYS 2210.0064
ALA 2220.0065
LYS 2230.0051
ALA 2240.0076
GLY 2250.0077
ALA 2260.0079
GLY 2270.0071
SER 2280.0070
ALA 2290.0071
THR 2300.0061
LEU 2310.0049
SER 2320.0052
MET 2330.0061
MET 2330.0061
ALA 2340.0073
TYR 2350.0074
ALA 2360.0069
GLY 2370.0065
ALA 2380.0083
ARG 2390.0068
PHE 2400.0029
VAL 2410.0034
PHE 2420.0021
SER 2430.0033
LEU 2440.0056
VAL 2450.0045
ASP 2460.0064
ALA 2470.0051
MET 2480.0058
ASN 2490.0062
GLY 2500.0317
LYS 2510.0201
GLU 2520.0148
GLY 2530.0387
VAL 2540.0093
VAL 2550.0068
GLU 2560.0053
CYS 2570.0096
SER 2580.0124
PHE 2590.0083
VAL 2600.0046
LYS 2610.0035
SER 2620.0108
GLN 2630.0166
GLU 2640.0197
THR 2650.0113
GLU 2660.0080
CYS 2670.0066
THR 2680.0076
TYR 2690.0026
PHE 2700.0103
SER 2710.0140
THR 2720.0160
PRO 2730.0188
LEU 2740.0125
LEU 2750.0110
LEU 2760.0067
GLY 2770.0083
LYS 2780.0092
LYS 2790.0062
GLY 2800.0064
ILE 2810.0120
GLU 2820.0208
LYS 2830.0224
ASN 2840.0243
LEU 2850.0231
GLY 2860.0244
ILE 2870.0206
GLY 2880.0227
LYS 2890.0228
VAL 2900.0205
SER 2910.0285
SER 2920.0279
PHE 2930.0163
GLU 2940.0141
GLU 2950.0156
LYS 2960.0166
MET 2970.0065
ILE 2980.0073
SER 2990.0121
ASP 3000.0064
ALA 3010.0077
ILE 3020.0074
PRO 3030.0133
GLU 3040.0144
LEU 3050.0101
LYS 3060.0103
ALA 3070.0094
SER 3080.0071
ILE 3090.0064
LYS 3100.0038
LYS 3110.0068
GLY 3120.0054
GLU 3130.0013
ASP 3140.0133
PHE 3150.0061
VAL 3160.0065
LYS 3170.0122
THR 3180.0115
LEU 3190.0197

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.