CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 82  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0680
ASN 60.0127
ALA 70.0100
LYS 80.0105
VAL 90.0044
ALA 100.0016
VAL 110.0041
LEU 120.0057
GLY 130.0094
ALA 140.0075
SER 150.0098
GLY 160.0114
GLY 170.0107
ILE 180.0076
GLY 190.0093
GLN 200.0075
PRO 210.0051
LEU 220.0077
SER 230.0082
LEU 240.0068
LEU 250.0074
LEU 260.0103
LYS 270.0127
ASN 280.0132
SER 290.0110
PRO 300.0095
LEU 310.0064
VAL 320.0068
SER 330.0123
ARG 340.0116
LEU 350.0078
THR 360.0071
LEU 370.0078
TYR 380.0073
ASP 390.0164
ILE 400.0211
ALA 410.0269
HIS 420.0148
THR 430.0103
PRO 440.0189
GLY 450.0182
VAL 460.0059
ALA 470.0094
ALA 480.0111
ASP 490.0091
LEU 500.0051
SER 510.0075
HIS 520.0085
ILE 530.0073
GLU 540.0220
THR 550.0190
LYS 560.0161
ALA 570.0171
ALA 580.0191
VAL 590.0154
LYS 600.0144
GLY 610.0140
TYR 620.0117
LEU 630.0129
GLY 640.0105
PRO 650.0174
GLU 660.0168
GLN 670.0082
LEU 680.0082
PRO 690.0118
ASP 700.0074
CYS 710.0009
LEU 720.0067
LYS 730.0055
GLY 740.0120
CYS 750.0093
ASP 760.0101
VAL 770.0072
VAL 780.0045
VAL 790.0032
ILE 800.0030
PRO 810.0044
ALA 820.0076
GLY 830.0089
VAL 840.0129
PRO 850.0170
ARG 860.0102
LYS 870.0088
PRO 880.0094
GLY 890.0125
MET 900.0061
THR 910.0062
ARG 920.0084
ASP 930.0087
ASP 940.0100
LEU 950.0116
PHE 960.0067
ASN 970.0091
THR 980.0109
ASN 990.0091
ALA 1000.0047
THR 1010.0047
THR 1010.0046
ILE 1020.0070
VAL 1030.0053
ALA 1040.0033
THR 1050.0071
LEU 1060.0120
THR 1070.0118
ALA 1080.0141
ALA 1090.0189
CYS 1100.0158
ALA 1110.0146
GLN 1120.0163
HIS 1130.0179
CYS 1140.0134
PRO 1150.0099
GLU 1160.0110
ALA 1170.0128
MET 1180.0068
MET 1180.0068
ILE 1190.0051
CYS 1200.0037
VAL 1210.0034
ILE 1220.0042
ALA 1230.0034
ASN 1240.0066
PRO 1250.0081
VAL 1260.0044
ASN 1270.0025
SER 1280.0026
THR 1290.0038
ILE 1300.0072
PRO 1310.0071
ILE 1320.0050
THR 1330.0052
ALA 1340.0067
GLU 1350.0091
VAL 1360.0081
PHE 1370.0071
LYS 1380.0221
LYS 1390.0285
HIS 1400.0281
GLY 1410.0284
VAL 1420.0089
TYR 1430.0075
ASN 1440.0086
PRO 1450.0142
ASN 1460.0078
LYS 1470.0081
ILE 1480.0081
PHE 1490.0077
GLY 1500.0072
VAL 1510.0071
THR 1520.0062
THR 1530.0068
LEU 1540.0069
ASP 1550.0055
ILE 1560.0069
VAL 1570.0081
ARG 1580.0074
ALA 1590.0078
ASN 1600.0089
THR 1610.0084
PHE 1620.0090
VAL 1630.0066
ALA 1640.0053
GLU 1650.0083
LEU 1660.0110
LYS 1670.0094
GLY 1680.0123
LEU 1690.0091
ASP 1700.0109
PRO 1710.0066
ALA 1720.0069
ARG 1730.0084
VAL 1740.0018
ASN 1750.0031
VAL 1760.0037
PRO 1770.0054
VAL 1780.0049
ILE 1790.0049
GLY 1800.0043
GLY 1810.0034
HIS 1820.0027
ALA 1830.0061
GLY 1840.0094
LYS 1850.0100
THR 1860.0061
ILE 1870.0058
ILE 1880.0058
PRO 1890.0056
LEU 1900.0023
ILE 1910.0024
SER 1920.0040
GLN 1930.0055
CYS 1940.0027
THR 1950.0024
PRO 1960.0030
LYS 1970.0025
VAL 1980.0027
ASP 1990.0057
PHE 2000.0072
PRO 2010.0098
GLN 2020.0083
ASP 2030.0128
GLN 2040.0128
LEU 2050.0076
THR 2060.0134
ALA 2070.0146
LEU 2080.0087
THR 2090.0067
GLY 2100.0073
ARG 2110.0050
ILE 2120.0025
GLN 2130.0038
GLU 2140.0066
ALA 2150.0056
GLY 2160.0088
THR 2170.0103
GLU 2180.0121
VAL 2190.0105
VAL 2200.0071
LYS 2210.0097
ALA 2220.0111
LYS 2230.0077
ALA 2240.0085
GLY 2250.0060
ALA 2260.0036
GLY 2270.0047
SER 2280.0054
ALA 2290.0037
THR 2300.0045
LEU 2310.0047
SER 2320.0060
MET 2330.0072
MET 2330.0072
ALA 2340.0073
TYR 2350.0076
ALA 2360.0078
GLY 2370.0087
ALA 2380.0075
ARG 2390.0071
PHE 2400.0055
VAL 2410.0054
PHE 2420.0071
SER 2430.0092
LEU 2440.0076
VAL 2450.0078
ASP 2460.0125
ALA 2470.0095
MET 2480.0121
ASN 2490.0129
GLY 2500.0135
LYS 2510.0167
GLU 2520.0211
GLY 2530.0112
VAL 2540.0136
VAL 2550.0099
GLU 2560.0067
CYS 2570.0071
SER 2580.0105
PHE 2590.0080
VAL 2600.0095
LYS 2610.0101
SER 2620.0087
GLN 2630.0043
GLU 2640.0049
THR 2650.0032
GLU 2660.0100
CYS 2670.0062
THR 2680.0100
TYR 2690.0086
PHE 2700.0062
SER 2710.0064
THR 2720.0054
PRO 2730.0060
LEU 2740.0061
LEU 2750.0104
LEU 2760.0085
GLY 2770.0098
LYS 2780.0125
LYS 2790.0051
GLY 2800.0027
ILE 2810.0057
GLU 2820.0114
LYS 2830.0174
ASN 2840.0128
LEU 2850.0194
GLY 2860.0097
ILE 2870.0052
GLY 2880.0085
LYS 2890.0204
VAL 2900.0107
SER 2910.0123
SER 2920.0142
PHE 2930.0123
GLU 2940.0012
GLU 2950.0127
LYS 2960.0167
MET 2970.0088
ILE 2980.0111
SER 2990.0193
ASP 3000.0137
ALA 3010.0071
ILE 3020.0067
PRO 3030.0126
GLU 3040.0134
LEU 3050.0091
LYS 3060.0128
ALA 3070.0150
SER 3080.0086
ILE 3090.0090
LYS 3100.0133
LYS 3110.0099
GLY 3120.0063
GLU 3130.0115
ASP 3140.0086
PHE 3150.0085
VAL 3160.0104
LYS 3170.0162
THR 3180.0453
LEU 3190.0334
ASN 60.0231
ALA 70.0156
LYS 80.0113
VAL 90.0077
ALA 100.0072
VAL 110.0065
LEU 120.0055
GLY 130.0046
ALA 140.0047
SER 150.0043
GLY 160.0045
GLY 170.0047
ILE 180.0046
GLY 190.0058
GLN 200.0050
PRO 210.0034
LEU 220.0062
SER 230.0071
LEU 240.0076
LEU 250.0069
LEU 260.0081
LYS 270.0071
ASN 280.0114
SER 290.0118
PRO 300.0210
LEU 310.0203
VAL 320.0135
SER 330.0138
ARG 340.0104
LEU 350.0089
THR 360.0086
LEU 370.0085
TYR 380.0075
ASP 390.0052
ILE 400.0083
ALA 410.0074
HIS 420.0060
THR 430.0041
PRO 440.0043
GLY 450.0065
VAL 460.0051
ALA 470.0065
ALA 480.0074
ASP 490.0066
LEU 500.0079
SER 510.0093
HIS 520.0106
ILE 530.0096
GLU 540.0097
THR 550.0065
LYS 560.0076
ALA 570.0073
ALA 580.0153
VAL 590.0110
LYS 600.0109
GLY 610.0068
TYR 620.0051
LEU 630.0061
GLY 640.0125
PRO 650.0176
GLU 660.0138
GLN 670.0091
LEU 680.0106
PRO 690.0159
ASP 700.0083
CYS 710.0080
LEU 720.0044
LYS 730.0042
GLY 740.0114
CYS 750.0095
ASP 760.0083
VAL 770.0082
VAL 780.0080
VAL 790.0076
ILE 800.0064
PRO 810.0071
ALA 820.0109
GLY 830.0139
VAL 840.0283
PRO 850.0406
ARG 860.0266
LYS 870.0242
PRO 880.0261
GLY 890.0400
MET 900.0134
THR 910.0146
ARG 920.0161
ASP 930.0187
ASP 940.0242
LEU 950.0189
PHE 960.0115
ASN 970.0152
THR 980.0223
ASN 990.0095
ALA 1000.0088
THR 1010.0192
ILE 1020.0126
VAL 1030.0110
ALA 1040.0145
THR 1050.0172
LEU 1060.0109
THR 1070.0101
ALA 1080.0088
ALA 1090.0093
CYS 1100.0077
ALA 1110.0125
GLN 1120.0204
HIS 1130.0198
CYS 1140.0228
PRO 1150.0145
GLU 1160.0220
ALA 1170.0175
MET 1180.0074
ILE 1190.0052
CYS 1200.0048
VAL 1210.0063
ILE 1220.0091
ALA 1230.0074
ASN 1240.0110
PRO 1250.0124
VAL 1260.0063
ASN 1270.0053
SER 1280.0071
THR 1290.0079
ILE 1300.0096
PRO 1310.0110
ILE 1320.0138
THR 1330.0138
ALA 1340.0147
GLU 1350.0178
VAL 1360.0161
PHE 1370.0118
LYS 1380.0180
LYS 1390.0222
HIS 1400.0132
GLY 1410.0105
VAL 1420.0150
TYR 1430.0166
ASN 1440.0235
PRO 1450.0239
ASN 1460.0152
LYS 1470.0117
ILE 1480.0047
PHE 1490.0027
GLY 1500.0070
VAL 1510.0077
THR 1520.0079
THR 1530.0087
LEU 1540.0070
ASP 1550.0094
ILE 1560.0137
VAL 1570.0118
ARG 1580.0113
ALA 1590.0149
ASN 1600.0173
THR 1610.0155
PHE 1620.0191
VAL 1630.0147
ALA 1640.0113
GLU 1650.0174
LEU 1660.0284
LYS 1670.0237
GLY 1680.0266
LEU 1690.0161
ASP 1700.0210
PRO 1710.0194
ALA 1720.0422
ARG 1730.0436
VAL 1740.0214
ASN 1750.0175
VAL 1760.0126
PRO 1770.0172
VAL 1780.0130
ILE 1790.0095
GLY 1800.0063
GLY 1810.0060
HIS 1820.0061
ALA 1830.0076
GLY 1840.0112
LYS 1850.0153
THR 1860.0078
ILE 1870.0097
ILE 1880.0107
PRO 1890.0145
LEU 1900.0173
ILE 1910.0185
SER 1920.0173
GLN 1930.0097
CYS 1940.0039
THR 1950.0243
PRO 1960.0352
LYS 1970.0313
VAL 1980.0134
ASP 1990.0218
PHE 2000.0135
PRO 2010.0224
GLN 2020.0383
ASP 2030.0354
GLN 2040.0136
LEU 2050.0103
THR 2060.0090
ALA 2070.0087
LEU 2080.0038
THR 2090.0056
GLY 2100.0091
ARG 2110.0102
ILE 2120.0116
GLN 2130.0106
GLU 2140.0142
ALA 2150.0136
GLY 2160.0134
THR 2170.0173
GLU 2180.0404
VAL 2190.0369
VAL 2200.0137
LYS 2210.0391
ALA 2220.0332
LYS 2230.0247
ALA 2240.0206
GLY 2250.0094
ALA 2260.0181
GLY 2270.0197
SER 2280.0212
ALA 2290.0225
THR 2300.0069
LEU 2310.0041
SER 2320.0023
MET 2330.0034
MET 2330.0034
ALA 2340.0032
TYR 2350.0029
ALA 2360.0043
GLY 2370.0061
ALA 2380.0046
ARG 2390.0048
PHE 2400.0056
VAL 2410.0069
PHE 2420.0054
SER 2430.0041
LEU 2440.0038
VAL 2450.0066
ASP 2460.0091
ALA 2470.0058
MET 2480.0102
ASN 2490.0135
GLY 2500.0049
LYS 2510.0043
GLU 2520.0107
GLY 2530.0186
VAL 2540.0065
VAL 2550.0070
GLU 2560.0084
CYS 2570.0110
SER 2580.0083
PHE 2590.0042
VAL 2600.0050
LYS 2610.0101
SER 2620.0098
GLN 2630.0141
GLU 2640.0121
THR 2650.0159
GLU 2660.0077
CYS 2670.0081
THR 2680.0094
TYR 2690.0087
PHE 2700.0032
SER 2710.0062
THR 2720.0075
PRO 2730.0107
LEU 2740.0067
LEU 2750.0077
LEU 2760.0077
GLY 2770.0088
LYS 2780.0129
LYS 2790.0076
GLY 2800.0064
ILE 2810.0029
GLU 2820.0063
LYS 2830.0063
ASN 2840.0049
LEU 2850.0075
GLY 2860.0106
ILE 2870.0115
GLY 2880.0191
LYS 2890.0275
VAL 2900.0325
SER 2910.0428
SER 2920.0397
PHE 2930.0357
GLU 2940.0202
GLU 2950.0161
LYS 2960.0098
MET 2970.0135
ILE 2980.0086
SER 2990.0268
ASP 3000.0289
ALA 3010.0125
ILE 3020.0037
PRO 3030.0028
GLU 3040.0040
LEU 3050.0035
LYS 3060.0068
ALA 3070.0080
SER 3080.0093
ILE 3090.0096
LYS 3100.0098
LYS 3110.0060
GLY 3120.0096
GLU 3130.0117
ASP 3140.0273
PHE 3150.0115
VAL 3160.0132
LYS 3170.0347
THR 3180.0680
LEU 3190.0180

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.