CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 83  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0620
ASN 60.0301
ALA 70.0171
LYS 80.0139
VAL 90.0087
ALA 100.0134
VAL 110.0140
LEU 120.0147
GLY 130.0137
ALA 140.0101
SER 150.0097
GLY 160.0105
GLY 170.0132
ILE 180.0091
GLY 190.0091
GLN 200.0093
PRO 210.0087
LEU 220.0100
SER 230.0092
LEU 240.0095
LEU 250.0092
LEU 260.0098
LYS 270.0091
ASN 280.0178
SER 290.0230
PRO 300.0351
LEU 310.0275
VAL 320.0240
SER 330.0276
ARG 340.0100
LEU 350.0073
THR 360.0069
LEU 370.0099
TYR 380.0090
ASP 390.0049
ILE 400.0150
ALA 410.0177
HIS 420.0109
THR 430.0059
PRO 440.0046
GLY 450.0083
VAL 460.0096
ALA 470.0095
ALA 480.0091
ASP 490.0090
LEU 500.0076
SER 510.0078
HIS 520.0052
ILE 530.0016
GLU 540.0043
THR 550.0128
LYS 560.0201
ALA 570.0201
ALA 580.0157
VAL 590.0085
LYS 600.0103
GLY 610.0097
TYR 620.0082
LEU 630.0150
GLY 640.0243
PRO 650.0303
GLU 660.0310
GLN 670.0223
LEU 680.0197
PRO 690.0318
ASP 700.0224
CYS 710.0173
LEU 720.0174
LYS 730.0258
GLY 740.0155
CYS 750.0122
ASP 760.0145
VAL 770.0139
VAL 780.0118
VAL 790.0124
ILE 800.0155
PRO 810.0166
ALA 820.0242
GLY 830.0182
VAL 840.0162
PRO 850.0169
ARG 860.0252
LYS 870.0234
PRO 880.0214
GLY 890.0318
MET 900.0196
THR 910.0125
ARG 920.0150
ASP 930.0157
ASP 940.0184
LEU 950.0139
PHE 960.0162
ASN 970.0248
THR 980.0208
ASN 990.0123
ALA 1000.0101
THR 1010.0139
THR 1010.0138
ILE 1020.0161
VAL 1030.0099
ALA 1040.0083
THR 1050.0103
LEU 1060.0139
THR 1070.0083
ALA 1080.0152
ALA 1090.0127
CYS 1100.0133
ALA 1110.0208
GLN 1120.0227
HIS 1130.0161
CYS 1140.0264
PRO 1150.0139
GLU 1160.0170
ALA 1170.0134
MET 1180.0059
MET 1180.0059
ILE 1190.0058
CYS 1200.0053
VAL 1210.0055
ILE 1220.0068
ALA 1230.0076
ASN 1240.0056
PRO 1250.0047
VAL 1260.0074
ASN 1270.0078
SER 1280.0085
THR 1290.0083
ILE 1300.0119
PRO 1310.0105
ILE 1320.0101
THR 1330.0115
ALA 1340.0165
GLU 1350.0167
VAL 1360.0117
PHE 1370.0100
LYS 1380.0212
LYS 1390.0154
HIS 1400.0175
GLY 1410.0300
VAL 1420.0187
TYR 1430.0179
ASN 1440.0206
PRO 1450.0224
ASN 1460.0111
LYS 1470.0078
ILE 1480.0092
PHE 1490.0108
GLY 1500.0071
VAL 1510.0070
THR 1520.0071
THR 1530.0067
LEU 1540.0067
ASP 1550.0082
ILE 1560.0092
VAL 1570.0083
ARG 1580.0114
ALA 1590.0157
ASN 1600.0127
THR 1610.0131
PHE 1620.0210
VAL 1630.0217
ALA 1640.0177
GLU 1650.0224
LEU 1660.0235
LYS 1670.0164
GLY 1680.0122
LEU 1690.0037
ASP 1700.0279
PRO 1710.0116
ALA 1720.0147
ARG 1730.0251
VAL 1740.0071
ASN 1750.0082
VAL 1760.0095
PRO 1770.0106
VAL 1780.0040
ILE 1790.0040
GLY 1800.0050
GLY 1810.0066
HIS 1820.0064
ALA 1830.0078
GLY 1840.0086
LYS 1850.0095
THR 1860.0068
ILE 1870.0049
ILE 1880.0072
PRO 1890.0071
LEU 1900.0068
ILE 1910.0054
SER 1920.0070
GLN 1930.0075
CYS 1940.0143
THR 1950.0129
PRO 1960.0116
LYS 1970.0141
VAL 1980.0242
ASP 1990.0172
PHE 2000.0091
PRO 2010.0241
GLN 2020.0271
ASP 2030.0298
GLN 2040.0211
LEU 2050.0056
THR 2060.0054
ALA 2070.0109
LEU 2080.0196
THR 2090.0190
GLY 2100.0126
ARG 2110.0126
ILE 2120.0129
GLN 2130.0108
GLU 2140.0146
ALA 2150.0050
GLY 2160.0152
THR 2170.0248
GLU 2180.0274
VAL 2190.0125
VAL 2200.0049
LYS 2210.0293
ALA 2220.0305
LYS 2230.0310
ALA 2240.0406
GLY 2250.0413
ALA 2260.0382
GLY 2270.0252
SER 2280.0122
ALA 2290.0104
THR 2300.0041
LEU 2310.0043
SER 2320.0043
MET 2330.0044
MET 2330.0044
ALA 2340.0044
TYR 2350.0022
ALA 2360.0031
GLY 2370.0051
ALA 2380.0064
ARG 2390.0037
PHE 2400.0066
VAL 2410.0075
PHE 2420.0081
SER 2430.0100
LEU 2440.0094
VAL 2450.0045
ASP 2460.0146
ALA 2470.0141
MET 2480.0146
ASN 2490.0147
GLY 2500.0307
LYS 2510.0216
GLU 2520.0265
GLY 2530.0620
VAL 2540.0092
VAL 2550.0100
GLU 2560.0092
CYS 2570.0115
SER 2580.0090
PHE 2590.0121
VAL 2600.0123
LYS 2610.0169
SER 2620.0194
GLN 2630.0247
GLU 2640.0223
THR 2650.0145
GLU 2660.0039
CYS 2670.0068
THR 2680.0133
TYR 2690.0149
PHE 2700.0081
SER 2710.0069
THR 2720.0066
PRO 2730.0104
LEU 2740.0119
LEU 2750.0121
LEU 2760.0117
GLY 2770.0113
LYS 2780.0151
LYS 2790.0080
GLY 2800.0074
ILE 2810.0063
GLU 2820.0141
LYS 2830.0180
ASN 2840.0180
LEU 2850.0236
GLY 2860.0165
ILE 2870.0172
GLY 2880.0256
LYS 2890.0340
VAL 2900.0080
SER 2910.0079
SER 2920.0078
PHE 2930.0081
GLU 2940.0013
GLU 2950.0036
LYS 2960.0049
MET 2970.0039
ILE 2980.0054
SER 2990.0081
ASP 3000.0114
ALA 3010.0099
ILE 3020.0102
PRO 3030.0147
GLU 3040.0165
LEU 3050.0115
LYS 3060.0093
ALA 3070.0143
SER 3080.0157
ILE 3090.0116
LYS 3100.0109
LYS 3110.0133
GLY 3120.0099
GLU 3130.0029
ASP 3140.0211
PHE 3150.0043
VAL 3160.0153
LYS 3170.0248
THR 3180.0349
LEU 3190.0453
ASN 60.0174
ALA 70.0136
LYS 80.0086
VAL 90.0077
ALA 100.0032
VAL 110.0023
LEU 120.0029
GLY 130.0056
ALA 140.0065
SER 150.0076
GLY 160.0069
GLY 170.0053
ILE 180.0051
GLY 190.0047
GLN 200.0034
PRO 210.0040
LEU 220.0023
SER 230.0019
LEU 240.0021
LEU 250.0018
LEU 260.0066
LYS 270.0077
ASN 280.0107
SER 290.0102
PRO 300.0177
LEU 310.0149
VAL 320.0126
SER 330.0126
ARG 340.0056
LEU 350.0054
THR 360.0046
LEU 370.0076
TYR 380.0059
ASP 390.0147
ILE 400.0232
ALA 410.0265
HIS 420.0108
THR 430.0094
PRO 440.0119
GLY 450.0118
VAL 460.0073
ALA 470.0091
ALA 480.0089
ASP 490.0075
LEU 500.0087
SER 510.0106
HIS 520.0094
ILE 530.0077
GLU 540.0077
THR 550.0102
LYS 560.0141
ALA 570.0173
ALA 580.0046
VAL 590.0075
LYS 600.0069
GLY 610.0104
TYR 620.0107
LEU 630.0167
GLY 640.0173
PRO 650.0164
GLU 660.0087
GLN 670.0090
LEU 680.0078
PRO 690.0154
ASP 700.0151
CYS 710.0087
LEU 720.0084
LYS 730.0118
GLY 740.0072
CYS 750.0081
ASP 760.0074
VAL 770.0090
VAL 780.0069
VAL 790.0051
ILE 800.0050
PRO 810.0048
ALA 820.0090
GLY 830.0083
VAL 840.0070
PRO 850.0063
ARG 860.0020
LYS 870.0055
PRO 880.0026
GLY 890.0069
MET 900.0097
THR 910.0100
ARG 920.0069
ASP 930.0074
ASP 940.0072
LEU 950.0035
PHE 960.0038
ASN 970.0103
THR 980.0093
ASN 990.0096
ALA 1000.0089
THR 1010.0112
ILE 1020.0121
VAL 1030.0105
ALA 1040.0095
THR 1050.0118
LEU 1060.0086
THR 1070.0079
ALA 1080.0077
ALA 1090.0077
CYS 1100.0074
ALA 1110.0065
GLN 1120.0063
HIS 1130.0067
CYS 1140.0113
PRO 1150.0100
GLU 1160.0147
ALA 1170.0153
MET 1180.0109
ILE 1190.0089
CYS 1200.0087
VAL 1210.0074
ILE 1220.0063
ALA 1230.0060
ASN 1240.0067
PRO 1250.0078
VAL 1260.0081
ASN 1270.0095
SER 1280.0078
THR 1290.0080
ILE 1300.0034
PRO 1310.0043
ILE 1320.0032
THR 1330.0033
ALA 1340.0069
GLU 1350.0065
VAL 1360.0053
PHE 1370.0060
LYS 1380.0227
LYS 1390.0244
HIS 1400.0187
GLY 1410.0247
VAL 1420.0185
TYR 1430.0184
ASN 1440.0214
PRO 1450.0209
ASN 1460.0147
LYS 1470.0143
ILE 1480.0106
PHE 1490.0101
GLY 1500.0028
VAL 1510.0031
THR 1520.0017
THR 1530.0028
LEU 1540.0031
ASP 1550.0023
ILE 1560.0028
VAL 1570.0016
ARG 1580.0022
ALA 1590.0032
ASN 1600.0034
THR 1610.0037
PHE 1620.0096
VAL 1630.0107
ALA 1640.0101
GLU 1650.0131
LEU 1660.0148
LYS 1670.0124
GLY 1680.0116
LEU 1690.0071
ASP 1700.0087
PRO 1710.0047
ALA 1720.0043
ARG 1730.0065
VAL 1740.0012
ASN 1750.0013
VAL 1760.0021
PRO 1770.0037
VAL 1780.0041
ILE 1790.0050
GLY 1800.0072
GLY 1810.0107
HIS 1820.0133
ALA 1830.0163
GLY 1840.0174
LYS 1850.0178
THR 1860.0142
ILE 1870.0102
ILE 1880.0078
PRO 1890.0043
LEU 1900.0024
ILE 1910.0032
SER 1920.0047
GLN 1930.0072
CYS 1940.0024
THR 1950.0029
PRO 1960.0054
LYS 1970.0067
VAL 1980.0127
ASP 1990.0104
PHE 2000.0091
PRO 2010.0172
GLN 2020.0167
ASP 2030.0152
GLN 2040.0084
LEU 2050.0066
THR 2060.0071
ALA 2070.0055
LEU 2080.0101
THR 2090.0130
GLY 2100.0162
ARG 2110.0135
ILE 2120.0095
GLN 2130.0102
GLU 2140.0076
ALA 2150.0068
GLY 2160.0146
THR 2170.0114
GLU 2180.0187
VAL 2190.0123
VAL 2200.0075
LYS 2210.0126
ALA 2220.0158
LYS 2230.0083
ALA 2240.0132
GLY 2250.0123
ALA 2260.0104
GLY 2270.0047
SER 2280.0042
ALA 2290.0086
THR 2300.0083
LEU 2310.0073
SER 2320.0056
MET 2330.0064
MET 2330.0064
ALA 2340.0049
TYR 2350.0039
ALA 2360.0036
GLY 2370.0048
ALA 2380.0028
ARG 2390.0021
PHE 2400.0027
VAL 2410.0031
PHE 2420.0021
SER 2430.0020
LEU 2440.0037
VAL 2450.0023
ASP 2460.0033
ALA 2470.0047
MET 2480.0042
ASN 2490.0048
GLY 2500.0021
LYS 2510.0044
GLU 2520.0025
GLY 2530.0011
VAL 2540.0027
VAL 2550.0023
GLU 2560.0025
CYS 2570.0025
SER 2580.0012
PHE 2590.0039
VAL 2600.0094
LYS 2610.0150
SER 2620.0230
GLN 2630.0276
GLU 2640.0266
THR 2650.0222
GLU 2660.0120
CYS 2670.0078
THR 2680.0071
TYR 2690.0090
PHE 2700.0081
SER 2710.0074
THR 2720.0067
PRO 2730.0075
LEU 2740.0056
LEU 2750.0044
LEU 2760.0029
GLY 2770.0031
LYS 2780.0040
LYS 2790.0104
GLY 2800.0108
ILE 2810.0081
GLU 2820.0099
LYS 2830.0074
ASN 2840.0092
LEU 2850.0116
GLY 2860.0142
ILE 2870.0152
GLY 2880.0197
LYS 2890.0285
VAL 2900.0146
SER 2910.0103
SER 2920.0073
PHE 2930.0051
GLU 2940.0053
GLU 2950.0064
LYS 2960.0056
MET 2970.0064
ILE 2980.0049
SER 2990.0046
ASP 3000.0116
ALA 3010.0132
ILE 3020.0086
PRO 3030.0113
GLU 3040.0143
LEU 3050.0120
LYS 3060.0108
ALA 3070.0107
SER 3080.0108
ILE 3090.0105
LYS 3100.0079
LYS 3110.0051
GLY 3120.0058
GLU 3130.0105
ASP 3140.0278
PHE 3150.0167
VAL 3160.0156
LYS 3170.0288
THR 3180.0455
LEU 3190.0237

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.