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***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0551
ASN 60.0254
ALA 70.0170
LYS 80.0103
VAL 90.0039
ALA 100.0019
VAL 110.0020
LEU 120.0023
GLY 130.0025
ALA 140.0032
SER 150.0045
GLY 160.0051
GLY 170.0061
ILE 180.0057
GLY 190.0040
GLN 200.0047
PRO 210.0053
LEU 220.0048
SER 230.0034
LEU 240.0047
LEU 250.0042
LEU 260.0027
LYS 270.0046
ASN 280.0037
SER 290.0056
PRO 300.0151
LEU 310.0149
VAL 320.0150
SER 330.0176
ARG 340.0123
LEU 350.0079
THR 360.0063
LEU 370.0074
TYR 380.0083
ASP 390.0076
ILE 400.0091
ALA 410.0055
HIS 420.0014
THR 430.0026
PRO 440.0031
GLY 450.0037
VAL 460.0069
ALA 470.0065
ALA 480.0071
ASP 490.0074
LEU 500.0079
SER 510.0089
HIS 520.0091
ILE 530.0047
GLU 540.0082
THR 550.0091
LYS 560.0154
ALA 570.0140
ALA 580.0168
VAL 590.0120
LYS 600.0126
GLY 610.0132
TYR 620.0040
LEU 630.0059
GLY 640.0125
PRO 650.0165
GLU 660.0101
GLN 670.0036
LEU 680.0062
PRO 690.0075
ASP 700.0080
CYS 710.0054
LEU 720.0062
LYS 730.0073
GLY 740.0062
CYS 750.0059
ASP 760.0097
VAL 770.0103
VAL 780.0086
VAL 790.0090
ILE 800.0088
PRO 810.0095
ALA 820.0095
GLY 830.0064
VAL 840.0084
PRO 850.0107
ARG 860.0065
LYS 870.0106
PRO 880.0172
GLY 890.0222
MET 900.0056
THR 910.0063
ARG 920.0064
ASP 930.0083
ASP 940.0052
LEU 950.0063
PHE 960.0064
ASN 970.0059
THR 980.0083
ASN 990.0086
ALA 1000.0078
THR 1010.0060
THR 1010.0060
ILE 1020.0108
VAL 1030.0118
ALA 1040.0113
THR 1050.0117
LEU 1060.0126
THR 1070.0146
ALA 1080.0143
ALA 1090.0136
CYS 1100.0117
ALA 1110.0117
GLN 1120.0123
HIS 1130.0094
CYS 1140.0170
PRO 1150.0148
GLU 1160.0244
ALA 1170.0229
MET 1180.0126
MET 1180.0126
ILE 1190.0106
CYS 1200.0115
VAL 1210.0105
ILE 1220.0051
ALA 1230.0066
ASN 1240.0069
PRO 1250.0075
VAL 1260.0051
ASN 1270.0050
SER 1280.0059
THR 1290.0058
ILE 1300.0076
PRO 1310.0075
ILE 1320.0093
THR 1330.0076
ALA 1340.0058
GLU 1350.0102
VAL 1360.0129
PHE 1370.0055
LYS 1380.0212
LYS 1390.0262
HIS 1400.0149
GLY 1410.0257
VAL 1420.0220
TYR 1430.0198
ASN 1440.0242
PRO 1450.0216
ASN 1460.0150
LYS 1470.0166
ILE 1480.0128
PHE 1490.0108
GLY 1500.0057
VAL 1510.0034
THR 1520.0054
THR 1530.0059
LEU 1540.0044
ASP 1550.0066
ILE 1560.0092
VAL 1570.0093
ARG 1580.0068
ALA 1590.0117
ASN 1600.0136
THR 1610.0100
PHE 1620.0133
VAL 1630.0151
ALA 1640.0132
GLU 1650.0133
LEU 1660.0197
LYS 1670.0148
GLY 1680.0121
LEU 1690.0074
ASP 1700.0075
PRO 1710.0087
ALA 1720.0181
ARG 1730.0140
VAL 1740.0101
ASN 1750.0082
VAL 1760.0071
PRO 1770.0053
VAL 1780.0044
ILE 1790.0042
GLY 1800.0043
GLY 1810.0042
HIS 1820.0027
ALA 1830.0010
GLY 1840.0017
LYS 1850.0025
THR 1860.0018
ILE 1870.0031
ILE 1880.0037
PRO 1890.0048
LEU 1900.0033
ILE 1910.0057
SER 1920.0060
GLN 1930.0065
CYS 1940.0031
THR 1950.0047
PRO 1960.0060
LYS 1970.0038
VAL 1980.0061
ASP 1990.0093
PHE 2000.0036
PRO 2010.0136
GLN 2020.0141
ASP 2030.0058
GLN 2040.0062
LEU 2050.0125
THR 2060.0098
ALA 2070.0098
LEU 2080.0137
THR 2090.0150
GLY 2100.0058
ARG 2110.0068
ILE 2120.0061
GLN 2130.0034
GLU 2140.0089
ALA 2150.0104
GLY 2160.0158
THR 2170.0171
GLU 2180.0194
VAL 2190.0168
VAL 2200.0134
LYS 2210.0152
ALA 2220.0161
LYS 2230.0111
ALA 2240.0126
GLY 2250.0091
ALA 2260.0042
GLY 2270.0066
SER 2280.0088
ALA 2290.0080
THR 2300.0052
LEU 2310.0074
SER 2320.0065
MET 2330.0049
MET 2330.0049
ALA 2340.0047
TYR 2350.0079
ALA 2360.0070
GLY 2370.0036
ALA 2380.0037
ARG 2390.0055
PHE 2400.0033
VAL 2410.0023
PHE 2420.0063
SER 2430.0062
LEU 2440.0058
VAL 2450.0066
ASP 2460.0136
ALA 2470.0091
MET 2480.0126
ASN 2490.0171
GLY 2500.0203
LYS 2510.0158
GLU 2520.0269
GLY 2530.0402
VAL 2540.0103
VAL 2550.0109
GLU 2560.0109
CYS 2570.0115
SER 2580.0063
PHE 2590.0044
VAL 2600.0051
LYS 2610.0056
SER 2620.0055
GLN 2630.0063
GLU 2640.0069
THR 2650.0081
GLU 2660.0053
CYS 2670.0048
THR 2680.0030
TYR 2690.0031
PHE 2700.0053
SER 2710.0069
THR 2720.0072
PRO 2730.0101
LEU 2740.0113
LEU 2750.0113
LEU 2760.0106
GLY 2770.0093
LYS 2780.0092
LYS 2790.0034
GLY 2800.0091
ILE 2810.0067
GLU 2820.0063
LYS 2830.0120
ASN 2840.0064
LEU 2850.0189
GLY 2860.0129
ILE 2870.0112
GLY 2880.0280
LYS 2890.0468
VAL 2900.0078
SER 2910.0114
SER 2920.0130
PHE 2930.0168
GLU 2940.0110
GLU 2950.0109
LYS 2960.0103
MET 2970.0093
ILE 2980.0087
SER 2990.0104
ASP 3000.0087
ALA 3010.0048
ILE 3020.0058
PRO 3030.0060
GLU 3040.0050
LEU 3050.0033
LYS 3060.0063
ALA 3070.0055
SER 3080.0068
ILE 3090.0083
LYS 3100.0108
LYS 3110.0058
GLY 3120.0080
GLU 3130.0140
ASP 3140.0303
PHE 3150.0141
VAL 3160.0195
LYS 3170.0370
THR 3180.0520
LEU 3190.0163
ASN 60.0171
ALA 70.0145
LYS 80.0140
VAL 90.0132
ALA 100.0067
VAL 110.0038
LEU 120.0027
GLY 130.0031
ALA 140.0098
SER 150.0093
GLY 160.0129
GLY 170.0166
ILE 180.0148
GLY 190.0145
GLN 200.0132
PRO 210.0133
LEU 220.0134
SER 230.0135
LEU 240.0115
LEU 250.0126
LEU 260.0142
LYS 270.0117
ASN 280.0133
SER 290.0167
PRO 300.0126
LEU 310.0120
VAL 320.0136
SER 330.0133
ARG 340.0094
LEU 350.0078
THR 360.0071
LEU 370.0065
TYR 380.0089
ASP 390.0084
ILE 400.0098
ALA 410.0116
HIS 420.0075
THR 430.0031
PRO 440.0039
GLY 450.0055
VAL 460.0033
ALA 470.0031
ALA 480.0033
ASP 490.0029
LEU 500.0047
SER 510.0043
HIS 520.0056
ILE 530.0079
GLU 540.0111
THR 550.0102
LYS 560.0082
ALA 570.0068
ALA 580.0080
VAL 590.0069
LYS 600.0066
GLY 610.0059
TYR 620.0077
LEU 630.0082
GLY 640.0091
PRO 650.0110
GLU 660.0128
GLN 670.0113
LEU 680.0118
PRO 690.0120
ASP 700.0091
CYS 710.0094
LEU 720.0092
LYS 730.0080
GLY 740.0141
CYS 750.0131
ASP 760.0136
VAL 770.0129
VAL 780.0047
VAL 790.0023
ILE 800.0023
PRO 810.0033
ALA 820.0094
GLY 830.0144
VAL 840.0233
PRO 850.0303
ARG 860.0118
LYS 870.0171
PRO 880.0128
GLY 890.0328
MET 900.0141
THR 910.0153
ARG 920.0140
ASP 930.0154
ASP 940.0102
LEU 950.0114
PHE 960.0133
ASN 970.0116
THR 980.0156
ASN 990.0163
ALA 1000.0151
THR 1010.0147
ILE 1020.0143
VAL 1030.0132
ALA 1040.0105
THR 1050.0085
LEU 1060.0099
THR 1070.0128
ALA 1080.0123
ALA 1090.0136
CYS 1100.0120
ALA 1110.0112
GLN 1120.0107
HIS 1130.0105
CYS 1140.0139
PRO 1150.0105
GLU 1160.0159
ALA 1170.0184
MET 1180.0083
ILE 1190.0080
CYS 1200.0083
VAL 1210.0082
ILE 1220.0070
ALA 1230.0089
ASN 1240.0096
PRO 1250.0101
VAL 1260.0036
ASN 1270.0024
SER 1280.0048
THR 1290.0070
ILE 1300.0080
PRO 1310.0086
ILE 1320.0122
THR 1330.0119
ALA 1340.0108
GLU 1350.0138
VAL 1360.0153
PHE 1370.0111
LYS 1380.0139
LYS 1390.0192
HIS 1400.0157
GLY 1410.0128
VAL 1420.0062
TYR 1430.0050
ASN 1440.0084
PRO 1450.0075
ASN 1460.0082
LYS 1470.0088
ILE 1480.0082
PHE 1490.0091
GLY 1500.0032
VAL 1510.0030
THR 1520.0043
THR 1530.0046
LEU 1540.0059
ASP 1550.0057
ILE 1560.0026
VAL 1570.0026
ARG 1580.0085
ALA 1590.0106
ASN 1600.0092
THR 1610.0090
PHE 1620.0201
VAL 1630.0207
ALA 1640.0179
GLU 1650.0195
LEU 1660.0226
LYS 1670.0211
GLY 1680.0137
LEU 1690.0180
ASP 1700.0168
PRO 1710.0146
ALA 1720.0258
ARG 1730.0313
VAL 1740.0161
ASN 1750.0137
VAL 1760.0125
PRO 1770.0108
VAL 1780.0092
ILE 1790.0107
GLY 1800.0131
GLY 1810.0152
HIS 1820.0132
ALA 1830.0129
GLY 1840.0177
LYS 1850.0224
THR 1860.0217
ILE 1870.0205
ILE 1880.0192
PRO 1890.0187
LEU 1900.0086
ILE 1910.0079
SER 1920.0116
GLN 1930.0170
CYS 1940.0244
THR 1950.0293
PRO 1960.0380
LYS 1970.0428
VAL 1980.0226
ASP 1990.0179
PHE 2000.0085
PRO 2010.0102
GLN 2020.0252
ASP 2030.0205
GLN 2040.0135
LEU 2050.0184
THR 2060.0157
ALA 2070.0160
LEU 2080.0220
THR 2090.0220
GLY 2100.0163
ARG 2110.0177
ILE 2120.0167
GLN 2130.0109
GLU 2140.0077
ALA 2150.0086
GLY 2160.0150
THR 2170.0133
GLU 2180.0160
VAL 2190.0124
VAL 2200.0064
LYS 2210.0127
ALA 2220.0253
LYS 2230.0234
ALA 2240.0272
GLY 2250.0277
ALA 2260.0275
GLY 2270.0198
SER 2280.0151
ALA 2290.0137
THR 2300.0097
LEU 2310.0088
SER 2320.0100
MET 2330.0114
MET 2330.0114
ALA 2340.0129
TYR 2350.0110
ALA 2360.0084
GLY 2370.0099
ALA 2380.0118
ARG 2390.0102
PHE 2400.0073
VAL 2410.0069
PHE 2420.0090
SER 2430.0073
LEU 2440.0119
VAL 2450.0101
ASP 2460.0101
ALA 2470.0139
MET 2480.0236
ASN 2490.0231
GLY 2500.0195
LYS 2510.0134
GLU 2520.0118
GLY 2530.0196
VAL 2540.0096
VAL 2550.0101
GLU 2560.0103
CYS 2570.0109
SER 2580.0073
PHE 2590.0053
VAL 2600.0042
LYS 2610.0036
SER 2620.0051
GLN 2630.0099
GLU 2640.0105
THR 2650.0063
GLU 2660.0152
CYS 2670.0125
THR 2680.0062
TYR 2690.0068
PHE 2700.0114
SER 2710.0125
THR 2720.0122
PRO 2730.0203
LEU 2740.0186
LEU 2750.0139
LEU 2760.0143
GLY 2770.0122
LYS 2780.0178
LYS 2790.0203
GLY 2800.0200
ILE 2810.0193
GLU 2820.0131
LYS 2830.0138
ASN 2840.0182
LEU 2850.0225
GLY 2860.0245
ILE 2870.0190
GLY 2880.0331
LYS 2890.0382
VAL 2900.0237
SER 2910.0141
SER 2920.0183
PHE 2930.0191
GLU 2940.0203
GLU 2950.0348
LYS 2960.0389
MET 2970.0334
ILE 2980.0419
SER 2990.0551
ASP 3000.0417
ALA 3010.0352
ILE 3020.0290
PRO 3030.0309
GLU 3040.0304
LEU 3050.0239
LYS 3060.0159
ALA 3070.0143
SER 3080.0078
ILE 3090.0045
LYS 3100.0105
LYS 3110.0115
GLY 3120.0126
GLU 3130.0131
ASP 3140.0167
PHE 3150.0038
VAL 3160.0109
LYS 3170.0225
THR 3180.0415
LEU 3190.0253

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.