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***  MDH2 homodimer  ***

<R2> analysis for 2609161750571071015

---  normal mode 89  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0601
ASN 60.0300
ALA 70.0237
LYS 80.0176
VAL 90.0126
ALA 100.0060
VAL 110.0074
LEU 120.0078
GLY 130.0091
ALA 140.0093
SER 150.0068
GLY 160.0056
GLY 170.0102
ILE 180.0106
GLY 190.0118
GLN 200.0130
PRO 210.0118
LEU 220.0127
SER 230.0130
LEU 240.0105
LEU 250.0116
LEU 260.0190
LYS 270.0158
ASN 280.0175
SER 290.0235
PRO 300.0220
LEU 310.0237
VAL 320.0218
SER 330.0196
ARG 340.0101
LEU 350.0085
THR 360.0078
LEU 370.0084
TYR 380.0201
ASP 390.0161
ILE 400.0146
ALA 410.0077
HIS 420.0040
THR 430.0070
PRO 440.0082
GLY 450.0093
VAL 460.0086
ALA 470.0084
ALA 480.0083
ASP 490.0090
LEU 500.0087
SER 510.0079
HIS 520.0085
ILE 530.0115
GLU 540.0164
THR 550.0165
LYS 560.0134
ALA 570.0129
ALA 580.0059
VAL 590.0061
LYS 600.0122
GLY 610.0135
TYR 620.0164
LEU 630.0146
GLY 640.0200
PRO 650.0269
GLU 660.0178
GLN 670.0142
LEU 680.0210
PRO 690.0166
ASP 700.0105
CYS 710.0162
LEU 720.0087
LYS 730.0091
GLY 740.0134
CYS 750.0093
ASP 760.0097
VAL 770.0060
VAL 780.0045
VAL 790.0045
ILE 800.0047
PRO 810.0049
ALA 820.0069
GLY 830.0029
VAL 840.0075
PRO 850.0139
ARG 860.0163
LYS 870.0180
PRO 880.0245
GLY 890.0207
MET 900.0127
THR 910.0160
ARG 920.0177
ASP 930.0187
ASP 940.0198
LEU 950.0165
PHE 960.0142
ASN 970.0139
THR 980.0104
ASN 990.0077
ALA 1000.0029
THR 1010.0044
THR 1010.0044
ILE 1020.0085
VAL 1030.0106
ALA 1040.0095
THR 1050.0145
LEU 1060.0176
THR 1070.0163
ALA 1080.0167
ALA 1090.0154
CYS 1100.0106
ALA 1110.0128
GLN 1120.0188
HIS 1130.0117
CYS 1140.0079
PRO 1150.0041
GLU 1160.0091
ALA 1170.0051
MET 1180.0042
MET 1180.0042
ILE 1190.0032
CYS 1200.0034
VAL 1210.0039
ILE 1220.0072
ALA 1230.0063
ASN 1240.0098
PRO 1250.0120
VAL 1260.0059
ASN 1270.0047
SER 1280.0047
THR 1290.0056
ILE 1300.0034
PRO 1310.0039
ILE 1320.0049
THR 1330.0059
ALA 1340.0125
GLU 1350.0125
VAL 1360.0115
PHE 1370.0077
LYS 1380.0103
LYS 1390.0115
HIS 1400.0120
GLY 1410.0113
VAL 1420.0067
TYR 1430.0101
ASN 1440.0140
PRO 1450.0189
ASN 1460.0145
LYS 1470.0102
ILE 1480.0094
PHE 1490.0083
GLY 1500.0039
VAL 1510.0027
THR 1520.0055
THR 1530.0071
LEU 1540.0063
ASP 1550.0067
ILE 1560.0081
VAL 1570.0110
ARG 1580.0078
ALA 1590.0115
ASN 1600.0139
THR 1610.0121
PHE 1620.0129
VAL 1630.0119
ALA 1640.0124
GLU 1650.0127
LEU 1660.0163
LYS 1670.0122
GLY 1680.0056
LEU 1690.0062
ASP 1700.0220
PRO 1710.0105
ALA 1720.0141
ARG 1730.0257
VAL 1740.0092
ASN 1750.0081
VAL 1760.0083
PRO 1770.0074
VAL 1780.0042
ILE 1790.0070
GLY 1800.0093
GLY 1810.0095
HIS 1820.0073
ALA 1830.0054
GLY 1840.0080
LYS 1850.0124
THR 1860.0101
ILE 1870.0073
ILE 1880.0079
PRO 1890.0070
LEU 1900.0030
ILE 1910.0073
SER 1920.0049
GLN 1930.0041
CYS 1940.0040
THR 1950.0081
PRO 1960.0096
LYS 1970.0058
VAL 1980.0194
ASP 1990.0143
PHE 2000.0091
PRO 2010.0124
GLN 2020.0194
ASP 2030.0132
GLN 2040.0043
LEU 2050.0123
THR 2060.0057
ALA 2070.0085
LEU 2080.0123
THR 2090.0105
GLY 2100.0070
ARG 2110.0074
ILE 2120.0036
GLN 2130.0035
GLU 2140.0128
ALA 2150.0161
GLY 2160.0202
THR 2170.0202
GLU 2180.0281
VAL 2190.0273
VAL 2200.0255
LYS 2210.0269
ALA 2220.0270
LYS 2230.0267
ALA 2240.0278
GLY 2250.0304
ALA 2260.0201
GLY 2270.0188
SER 2280.0146
ALA 2290.0129
THR 2300.0088
LEU 2310.0087
SER 2320.0078
MET 2330.0076
MET 2330.0076
ALA 2340.0086
TYR 2350.0105
ALA 2360.0117
GLY 2370.0102
ALA 2380.0130
ARG 2390.0119
PHE 2400.0085
VAL 2410.0082
PHE 2420.0102
SER 2430.0068
LEU 2440.0038
VAL 2450.0051
ASP 2460.0070
ALA 2470.0030
MET 2480.0062
ASN 2490.0093
GLY 2500.0148
LYS 2510.0140
GLU 2520.0232
GLY 2530.0171
VAL 2540.0081
VAL 2550.0059
GLU 2560.0046
CYS 2570.0039
SER 2580.0069
PHE 2590.0074
VAL 2600.0063
LYS 2610.0055
SER 2620.0048
GLN 2630.0093
GLU 2640.0105
THR 2650.0157
GLU 2660.0201
CYS 2670.0138
THR 2680.0067
TYR 2690.0045
PHE 2700.0104
SER 2710.0089
THR 2720.0051
PRO 2730.0031
LEU 2740.0025
LEU 2750.0040
LEU 2760.0032
GLY 2770.0045
LYS 2780.0122
LYS 2790.0115
GLY 2800.0093
ILE 2810.0122
GLU 2820.0080
LYS 2830.0094
ASN 2840.0063
LEU 2850.0072
GLY 2860.0046
ILE 2870.0057
GLY 2880.0372
LYS 2890.0601
VAL 2900.0254
SER 2910.0304
SER 2920.0304
PHE 2930.0217
GLU 2940.0145
GLU 2950.0227
LYS 2960.0196
MET 2970.0191
ILE 2980.0218
SER 2990.0291
ASP 3000.0238
ALA 3010.0174
ILE 3020.0151
PRO 3030.0196
GLU 3040.0181
LEU 3050.0135
LYS 3060.0150
ALA 3070.0142
SER 3080.0105
ILE 3090.0065
LYS 3100.0037
LYS 3110.0064
GLY 3120.0040
GLU 3130.0048
ASP 3140.0037
PHE 3150.0059
VAL 3160.0045
LYS 3170.0052
THR 3180.0317
LEU 3190.0198
ASN 60.0424
ALA 70.0325
LYS 80.0246
VAL 90.0145
ALA 100.0062
VAL 110.0069
LEU 120.0092
GLY 130.0102
ALA 140.0150
SER 150.0149
GLY 160.0117
GLY 170.0097
ILE 180.0074
GLY 190.0098
GLN 200.0113
PRO 210.0091
LEU 220.0079
SER 230.0085
LEU 240.0089
LEU 250.0092
LEU 260.0123
LYS 270.0107
ASN 280.0188
SER 290.0240
PRO 300.0335
LEU 310.0341
VAL 320.0267
SER 330.0277
ARG 340.0031
LEU 350.0040
THR 360.0110
LEU 370.0138
TYR 380.0239
ASP 390.0184
ILE 400.0133
ALA 410.0095
HIS 420.0126
THR 430.0137
PRO 440.0145
GLY 450.0185
VAL 460.0175
ALA 470.0169
ALA 480.0163
ASP 490.0168
LEU 500.0132
SER 510.0130
HIS 520.0126
ILE 530.0114
GLU 540.0135
THR 550.0124
LYS 560.0121
ALA 570.0117
ALA 580.0156
VAL 590.0139
LYS 600.0186
GLY 610.0191
TYR 620.0182
LEU 630.0112
GLY 640.0225
PRO 650.0371
GLU 660.0251
GLN 670.0150
LEU 680.0294
PRO 690.0303
ASP 700.0214
CYS 710.0188
LEU 720.0117
LYS 730.0108
GLY 740.0172
CYS 750.0136
ASP 760.0171
VAL 770.0114
VAL 780.0077
VAL 790.0066
ILE 800.0071
PRO 810.0060
ALA 820.0112
GLY 830.0076
VAL 840.0105
PRO 850.0078
ARG 860.0079
LYS 870.0087
PRO 880.0129
GLY 890.0122
MET 900.0078
THR 910.0081
ARG 920.0071
ASP 930.0091
ASP 940.0153
LEU 950.0111
PHE 960.0112
ASN 970.0187
THR 980.0161
ASN 990.0079
ALA 1000.0069
THR 1010.0076
ILE 1020.0058
VAL 1030.0020
ALA 1040.0064
THR 1050.0037
LEU 1060.0054
THR 1070.0067
ALA 1080.0061
ALA 1090.0057
CYS 1100.0100
ALA 1110.0163
GLN 1120.0152
HIS 1130.0107
CYS 1140.0148
PRO 1150.0162
GLU 1160.0184
ALA 1170.0156
MET 1180.0064
ILE 1190.0052
CYS 1200.0053
VAL 1210.0038
ILE 1220.0046
ALA 1230.0037
ASN 1240.0029
PRO 1250.0031
VAL 1260.0026
ASN 1270.0022
SER 1280.0011
THR 1290.0019
ILE 1300.0023
PRO 1310.0019
ILE 1320.0021
THR 1330.0029
ALA 1340.0022
GLU 1350.0042
VAL 1360.0062
PHE 1370.0063
LYS 1380.0104
LYS 1390.0124
HIS 1400.0163
GLY 1410.0174
VAL 1420.0097
TYR 1430.0054
ASN 1440.0030
PRO 1450.0078
ASN 1460.0084
LYS 1470.0052
ILE 1480.0029
PHE 1490.0028
GLY 1500.0010
VAL 1510.0039
THR 1520.0063
THR 1530.0088
LEU 1540.0100
ASP 1550.0105
ILE 1560.0137
VAL 1570.0146
ARG 1580.0100
ALA 1590.0161
ASN 1600.0177
THR 1610.0113
PHE 1620.0145
VAL 1630.0161
ALA 1640.0159
GLU 1650.0163
LEU 1660.0195
LYS 1670.0184
GLY 1680.0162
LEU 1690.0123
ASP 1700.0135
PRO 1710.0153
ALA 1720.0266
ARG 1730.0269
VAL 1740.0173
ASN 1750.0152
VAL 1760.0135
PRO 1770.0115
VAL 1780.0055
ILE 1790.0029
GLY 1800.0025
GLY 1810.0017
HIS 1820.0022
ALA 1830.0022
GLY 1840.0019
LYS 1850.0018
THR 1860.0013
ILE 1870.0034
ILE 1880.0034
PRO 1890.0053
LEU 1900.0024
ILE 1910.0010
SER 1920.0046
GLN 1930.0063
CYS 1940.0091
THR 1950.0131
PRO 1960.0151
LYS 1970.0111
VAL 1980.0250
ASP 1990.0213
PHE 2000.0202
PRO 2010.0275
GLN 2020.0300
ASP 2030.0168
GLN 2040.0116
LEU 2050.0242
THR 2060.0131
ALA 2070.0136
LEU 2080.0181
THR 2090.0184
GLY 2100.0159
ARG 2110.0172
ILE 2120.0123
GLN 2130.0081
GLU 2140.0102
ALA 2150.0060
GLY 2160.0113
THR 2170.0158
GLU 2180.0159
VAL 2190.0120
VAL 2200.0110
LYS 2210.0124
ALA 2220.0149
LYS 2230.0129
ALA 2240.0141
GLY 2250.0125
ALA 2260.0081
GLY 2270.0083
SER 2280.0059
ALA 2290.0046
THR 2300.0075
LEU 2310.0102
SER 2320.0093
MET 2330.0074
MET 2330.0074
ALA 2340.0089
TYR 2350.0129
ALA 2360.0128
GLY 2370.0100
ALA 2380.0111
ARG 2390.0103
PHE 2400.0094
VAL 2410.0091
PHE 2420.0062
SER 2430.0052
LEU 2440.0066
VAL 2450.0065
ASP 2460.0096
ALA 2470.0085
MET 2480.0090
ASN 2490.0100
GLY 2500.0080
LYS 2510.0131
GLU 2520.0124
GLY 2530.0056
VAL 2540.0161
VAL 2550.0121
GLU 2560.0087
CYS 2570.0081
SER 2580.0061
PHE 2590.0053
VAL 2600.0044
LYS 2610.0076
SER 2620.0143
GLN 2630.0186
GLU 2640.0164
THR 2650.0103
GLU 2660.0204
CYS 2670.0176
THR 2680.0140
TYR 2690.0098
PHE 2700.0067
SER 2710.0073
THR 2720.0073
PRO 2730.0109
LEU 2740.0082
LEU 2750.0113
LEU 2760.0109
GLY 2770.0148
LYS 2780.0151
LYS 2790.0124
GLY 2800.0105
ILE 2810.0130
GLU 2820.0289
LYS 2830.0227
ASN 2840.0187
LEU 2850.0136
GLY 2860.0152
ILE 2870.0120
GLY 2880.0108
LYS 2890.0102
VAL 2900.0071
SER 2910.0146
SER 2920.0165
PHE 2930.0163
GLU 2940.0062
GLU 2950.0117
LYS 2960.0131
MET 2970.0111
ILE 2980.0089
SER 2990.0173
ASP 3000.0163
ALA 3010.0103
ILE 3020.0146
PRO 3030.0198
GLU 3040.0192
LEU 3050.0160
LYS 3060.0172
ALA 3070.0149
SER 3080.0103
ILE 3090.0090
LYS 3100.0053
LYS 3110.0064
GLY 3120.0053
GLU 3130.0050
ASP 3140.0086
PHE 3150.0063
VAL 3160.0027
LYS 3170.0096
THR 3180.0316
LEU 3190.0282

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.