CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  lig_1.pdb  ***

CA distance fluctuations for 2610251945094007341

---  normal mode 11  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
LYS 46 0.05 ARG 12 -0.06 THR 176
SER 70 0.04 LYS 13 -0.04 TYR 174
PRO 56 0.03 LYS 14 -0.04 LYS 104
PRO 56 0.03 ARG 15 -0.03 LYS 104
TYR 174 0.04 GLU 16 -0.04 LYS 104
TYR 174 0.07 LYS 17 -0.05 LYS 104
LYS 173 0.06 GLU 18 -0.05 ALA 98
LYS 173 0.08 GLN 19 -0.05 ALA 107
GLN 172 0.06 PHE 20 -0.04 ALA 107
LYS 173 0.04 ARG 21 -0.03 ALA 107
LYS 173 0.06 LYS 22 -0.03 GLU 195
ARG 185 0.05 LEU 23 -0.04 GLY 136
ARG 185 0.06 PHE 24 -0.04 GLY 136
ARG 185 0.04 ILE 25 -0.06 GLY 136
ARG 185 0.04 GLY 26 -0.06 ASP 161
ARG 185 0.03 GLY 27 -0.07 ASP 161
ARG 185 0.03 LEU 28 -0.07 LYS 137
ARG 185 0.02 SER 29 -0.08 LYS 137
GLY 63 0.03 PHE 30 -0.07 LYS 137
ARG 185 0.03 GLU 31 -0.07 LYS 137
ARG 185 0.03 THR 32 -0.07 LYS 137
GLU 183 0.03 THR 33 -0.06 LYS 137
GLU 183 0.04 GLU 34 -0.05 LYS 137
ARG 12 0.03 GLU 35 -0.06 LYS 137
ARG 12 0.02 SER 36 -0.07 LYS 137
ARG 185 0.02 LEU 37 -0.07 GLY 136
ARG 12 0.03 ARG 38 -0.06 GLY 136
ARG 12 0.03 ASN 39 -0.07 GLY 136
ARG 12 0.03 TYR 40 -0.08 GLY 136
ARG 12 0.03 TYR 41 -0.08 GLY 136
ARG 12 0.04 GLU 42 -0.07 GLU 134
ARG 12 0.03 GLN 43 -0.09 GLU 134
ARG 12 0.04 TRP 44 -0.10 GLU 134
ARG 12 0.05 GLY 45 -0.07 GLU 134
ARG 12 0.05 LYS 46 -0.06 GLU 134
ARG 12 0.04 LEU 47 -0.05 GLU 134
LYS 173 0.03 THR 48 -0.03 GLU 134
GLU 183 0.04 ASP 49 -0.03 GLY 136
GLU 183 0.04 CYS 50 -0.04 GLY 136
GLU 183 0.05 VAL 51 -0.04 GLY 136
GLU 183 0.05 VAL 52 -0.04 LYS 137
GLU 183 0.06 MET 53 -0.03 LYS 137
GLU 183 0.06 ARG 54 -0.06 PRO 56
GLU 183 0.07 ASP 55 -0.05 ARG 62
GLU 183 0.08 PRO 56 -0.06 ARG 54
GLU 183 0.07 ALA 57 -0.07 SER 58
GLU 183 0.06 SER 58 -0.07 ALA 57
GLU 183 0.06 LYS 59 -0.06 GLU 31
GLU 183 0.05 ARG 60 -0.06 ALA 57
GLU 183 0.04 SER 61 -0.06 PRO 56
GLU 183 0.05 ARG 62 -0.05 PRO 56
ARG 185 0.04 GLY 63 -0.06 ASP 161
ARG 185 0.05 PHE 64 -0.05 LYS 137
ARG 185 0.05 GLY 65 -0.04 GLY 136
ARG 185 0.05 PHE 66 -0.03 GLY 136
LYS 173 0.04 VAL 67 -0.04 GLY 136
LYS 173 0.04 THR 68 -0.03 GLY 136
ARG 12 0.03 PHE 69 -0.05 GLU 134
ARG 12 0.04 SER 70 -0.04 GLU 134
ARG 12 0.04 SER 71 -0.04 GLU 134
ARG 12 0.01 MET 72 -0.04 GLU 134
ARG 12 0.03 ALA 73 -0.07 GLU 134
ARG 12 0.04 GLU 74 -0.08 GLU 134
ARG 12 0.02 VAL 75 -0.07 GLU 134
LYS 94 0.02 ASP 76 -0.11 GLU 134
ARG 12 0.03 ALA 77 -0.13 GLU 134
LYS 94 0.02 ALA 78 -0.11 GLU 134
LYS 94 0.02 MET 79 -0.13 GLY 136
LYS 94 0.02 ALA 80 -0.19 GLY 136
LYS 94 0.02 ALA 81 -0.16 GLY 136
LYS 94 0.03 ARG 82 -0.15 GLY 136
GLU 92 0.04 PRO 83 -0.14 LYS 137
ARG 12 0.02 HIS 84 -0.12 LYS 137
VAL 90 0.03 SER 85 -0.11 LYS 137
ARG 89 0.02 ILE 86 -0.10 LYS 137
ARG 89 0.02 ASP 87 -0.09 LYS 137
ASN 39 0.03 GLY 88 -0.10 LYS 137
ILE 86 0.02 ARG 89 -0.10 LYS 137
SER 85 0.03 VAL 90 -0.11 LYS 137
GLY 27 0.02 VAL 91 -0.10 LYS 137
PRO 83 0.04 GLU 92 -0.08 ASP 161
PRO 83 0.03 PRO 93 -0.07 GLY 136
ARG 185 0.04 LYS 94 -0.04 GLY 136
ARG 185 0.05 ARG 95 -0.03 ALA 107
ARG 185 0.09 ALA 96 -0.03 GLU 195
ARG 185 0.14 VAL 97 -0.04 GLN 19
LYS 173 0.15 ALA 98 -0.05 GLU 18
GLU 183 0.14 ARG 99 -0.06 GLU 195
GLU 183 0.17 GLU 100 -0.05 GLU 195
GLU 183 0.18 GLU 101 -0.04 GLU 195
ARG 185 0.14 SER 102 -0.06 GLU 195
GLU 183 0.13 GLY 103 -0.07 GLU 195
ARG 185 0.14 LYS 104 -0.05 LYS 17
ARG 147 0.14 PRO 105 -0.05 MET 193
ARG 147 0.11 GLY 106 -0.04 GLN 19
ARG 185 0.14 ALA 107 -0.05 GLN 19
ARG 185 0.10 HIS 108 -0.03 GLN 19
ARG 147 0.06 VAL 109 -0.03 GLN 19
ARG 185 0.03 THR 110 -0.02 GLN 19
GLN 194 0.04 VAL 111 -0.03 VAL 90
GLU 101 0.05 LYS 112 -0.05 VAL 90
LEU 188 0.07 LYS 113 -0.04 VAL 90
GLU 101 0.09 LEU 114 -0.05 ALA 80
GLU 101 0.13 PHE 115 -0.04 ALA 80
GLU 101 0.14 VAL 116 -0.05 ALA 80
GLU 101 0.15 GLY 117 -0.04 ALA 80
GLU 101 0.15 GLY 118 -0.04 ALA 80
GLU 101 0.12 ILE 119 -0.05 ALA 80
GLU 101 0.12 LYS 120 -0.05 ALA 80
GLU 101 0.11 GLU 121 -0.05 ALA 80
GLU 101 0.10 ASP 122 -0.06 ALA 80
GLU 101 0.10 THR 123 -0.07 ALA 80
GLU 101 0.09 GLU 124 -0.07 ALA 80
GLU 101 0.08 GLU 125 -0.08 ALA 80
GLU 101 0.07 HIS 126 -0.09 ALA 80
GLU 101 0.08 HIS 127 -0.09 ALA 80
GLU 101 0.08 LEU 128 -0.09 ALA 80
GLU 101 0.06 ARG 129 -0.11 ALA 80
GLU 101 0.06 ASP 130 -0.12 ALA 80
GLU 101 0.07 TYR 131 -0.11 ALA 80
GLU 101 0.06 PHE 132 -0.12 ALA 80
GLU 101 0.04 GLU 133 -0.15 ALA 80
GLU 101 0.04 GLU 134 -0.17 ALA 80
GLU 101 0.04 TYR 135 -0.17 ALA 80
GLU 101 0.03 GLY 136 -0.19 ALA 80
SER 189 0.04 LYS 137 -0.15 ALA 80
SER 189 0.05 ILE 138 -0.11 ALA 80
SER 189 0.07 ASP 139 -0.10 PRO 83
SER 189 0.08 THR 140 -0.08 PRO 83
SER 189 0.09 ILE 141 -0.08 ALA 80
SER 189 0.10 GLU 142 -0.07 ALA 80
LYS 104 0.10 ILE 143 -0.06 ALA 80
PRO 105 0.12 ILE 144 -0.05 ALA 80
LYS 104 0.12 THR 145 -0.05 ALA 80
PRO 105 0.14 ASP 146 -0.04 ALA 80
ARG 190 0.15 ARG 147 -0.04 THR 140
GLU 195 0.14 GLN 148 -0.05 THR 140
GLU 195 0.13 SER 149 -0.05 ALA 80
GLU 195 0.11 GLY 150 -0.06 ALA 80
LYS 104 0.12 LYS 151 -0.05 ALA 80
LYS 104 0.12 LYS 152 -0.05 ALA 80
LYS 104 0.14 ARG 153 -0.04 ALA 80
LYS 104 0.13 GLY 154 -0.04 ALA 80
LYS 104 0.13 PHE 155 -0.05 ALA 80
LYS 104 0.11 GLY 156 -0.05 ALA 80
LYS 104 0.10 PHE 157 -0.06 ALA 80
GLU 101 0.08 VAL 158 -0.07 ALA 80
LEU 188 0.07 THR 159 -0.07 VAL 90
SER 189 0.05 PHE 160 -0.09 PRO 83
SER 189 0.04 ASP 161 -0.11 PRO 83
GLU 101 0.02 ASP 162 -0.09 VAL 90
ALA 98 0.03 HIS 163 -0.05 VAL 90
ALA 98 0.02 ASP 164 -0.05 VAL 91
ALA 98 0.04 PRO 165 -0.07 ALA 80
ALA 98 0.06 VAL 166 -0.05 ALA 80
VAL 97 0.07 ASP 167 -0.02 LEU 188
ALA 98 0.06 LYS 168 -0.04 ALA 80
ALA 98 0.09 ILE 169 -0.05 ALA 80
ALA 98 0.13 VAL 170 -0.03 ALA 80
ALA 98 0.12 LEU 171 -0.03 LEU 188
ALA 98 0.11 GLN 172 -0.04 ARG 12
ALA 98 0.15 LYS 173 -0.04 ARG 12
GLU 100 0.13 TYR 174 -0.06 ARG 12
GLU 100 0.11 HIS 175 -0.06 ALA 80
GLU 100 0.10 THR 176 -0.06 ARG 12
GLU 100 0.10 ILE 177 -0.07 ALA 80
GLU 100 0.09 ASN 178 -0.07 ALA 80
GLU 100 0.10 GLY 179 -0.06 ARG 12
GLU 100 0.12 HIS 180 -0.06 ARG 12
GLU 100 0.14 ASN 181 -0.05 ARG 12
GLU 101 0.14 ALA 182 -0.05 ALA 80
GLU 101 0.18 GLU 183 -0.04 ARG 12
GLU 101 0.16 VAL 184 -0.04 ALA 80
GLU 101 0.18 ARG 185 -0.02 ALA 187
GLU 101 0.11 LYS 186 -0.02 ALA 80
PRO 105 0.10 ALA 187 -0.02 ARG 185
PHE 157 0.09 LEU 188 -0.03 LEU 171
ARG 147 0.12 SER 189 -0.03 LEU 171
ARG 147 0.15 ARG 190 -0.03 LYS 17
ARG 147 0.10 GLN 191 -0.03 GLN 19
ARG 147 0.13 GLU 192 -0.04 GLN 19
ARG 147 0.14 MET 193 -0.05 PRO 105
ARG 147 0.14 GLN 194 -0.06 GLY 103
ARG 147 0.15 GLU 195 -0.07 GLY 103

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.