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***  lig_1.pdb  ***

Normal Mode Analysis for ID 2610251945094007341

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.3906
mode 8 1.16 0.3829
mode 9 2.41 0.2660
mode 10 2.58 0.2974
mode 11 3.46 0.3625
mode 12 3.76 0.3191
mode 13 4.87 0.3423
mode 14 4.93 0.2902
mode 15 5.66 0.2352
mode 16 5.75 0.1667
mode 17 6.00 0.1759
mode 18 6.24 0.2317
mode 19 6.32 0.0507
mode 20 6.93 0.3107
mode 21 7.39 0.3616
mode 22 7.93 0.3878
mode 23 8.22 0.2692
mode 24 8.45 0.3358
mode 25 8.93 0.2010
mode 26 9.60 0.5047
mode 27 10.34 0.4076
mode 28 10.70 0.4301
mode 29 10.87 0.2100
mode 30 11.75 0.3915
mode 31 12.11 0.5668
mode 32 12.44 0.1406
mode 33 12.94 0.4714
mode 34 13.55 0.4813
mode 35 13.96 0.4833
mode 36 14.24 0.3366
mode 37 14.44 0.3233
mode 38 15.12 0.3921
mode 39 15.14 0.4091
mode 40 15.49 0.4464
mode 41 15.88 0.5752
mode 42 16.36 0.2678
mode 43 16.78 0.2242
mode 44 17.14 0.3481
mode 45 17.19 0.4511
mode 46 18.19 0.4160
mode 47 18.51 0.4263
mode 48 18.62 0.2727
mode 49 19.32 0.4296
mode 50 19.77 0.3316
mode 51 20.18 0.4045
mode 52 20.32 0.3399
mode 53 20.41 0.5267
mode 54 20.90 0.5085
mode 55 21.19 0.5130
mode 56 21.51 0.4277
mode 57 21.97 0.3994
mode 58 22.27 0.1171
mode 59 22.45 0.4809
mode 60 22.53 0.1970
mode 61 23.07 0.3499
mode 62 23.14 0.3314
mode 63 23.30 0.1600
mode 64 23.59 0.2408
mode 65 23.64 0.3485
mode 66 24.03 0.4451
mode 67 24.36 0.2907
mode 68 24.51 0.1531
mode 69 24.67 0.3066
mode 70 24.84 0.1576
mode 71 25.01 0.1707
mode 72 25.23 0.2208
mode 73 25.40 0.3790
mode 74 25.95 0.4342
mode 75 26.05 0.3095
mode 76 26.34 0.4735
mode 77 26.44 0.4672
mode 78 26.94 0.3393
mode 79 27.10 0.4262
mode 80 27.24 0.4350
mode 81 27.37 0.4086
mode 82 27.75 0.4455
mode 83 27.85 0.5124
mode 84 28.04 0.3508
mode 85 28.14 0.3657
mode 86 28.61 0.3620
mode 87 28.74 0.3042
mode 88 28.79 0.3553
mode 89 29.01 0.3472
mode 90 29.17 0.4484
mode 91 29.63 0.3255
mode 92 29.88 0.4495
mode 93 29.95 0.5064
mode 94 29.96 0.5524
mode 95 30.32 0.5096
mode 96 30.61 0.4244
mode 97 30.65 0.2240
mode 98 30.87 0.5167
mode 99 31.18 0.5311
mode 100 31.46 0.4150
mode 101 31.62 0.5029
mode 102 31.76 0.5242
mode 103 32.00 0.5180
mode 104 32.37 0.5440
mode 105 32.44 0.3143
mode 106 32.62 0.4845

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.